MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP110198 Location: 2441135..2453220 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-75 Replicon: chromosome
Accession: NZ_CP110198 Location: 2441135..2453220 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 1104-75 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCK70_RS11885 (2437056) | 2437056..2438258 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| OCK70_RS11890 (2438271) | 2438271..2439722 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| OCK70_RS11895 (2439866) | 2439866..2440873 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| OCK70_RS11900 (2441132) | 2441132..2442598 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| OCK70_RS11905 (2443406) | 2443406..2444120 | + | 715 | Protein_2328 | helix-turn-helix domain-containing protein | - |
| OCK70_RS11910 (2444176) | 2444176..2445084 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| OCK70_RS11915 (2445227) | 2445227..2445559 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| OCK70_RS11920 (2445549) | 2445549..2445764 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| OCK70_RS11925 (2445916) | 2445916..2446164 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OCK70_RS11930 (2446154) | 2446154..2446438 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OCK70_RS11935 (2446609) | 2446609..2446998 | + | 390 | WP_000194089.1 | RidA family protein | - |
| OCK70_RS11940 (2447050) | 2447050..2448129 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| OCK70_RS11945 (2448322) | 2448322..2448810 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| OCK70_RS11950 (2448855) | 2448855..2450363 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| OCK70_RS11955 (2450353) | 2450353..2451594 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| OCK70_RS11960 (2451664) | 2451664..2453220 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| OCK70_RS11965 (2453397) | 2453397..2454683 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| OCK70_RS11970 (2454658) | 2454658..2455683 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| OCK70_RS11975 (2455742) | 2455742..2456533 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| OCK70_RS11980 (2456579) | 2456579..2457670 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |