MGE detailed information
MGE type: Genomic_island MGE length: 15281 bp
Accession: NZ_CP110117 Location: 3885009..3900289 Organism: Escherichia coli strain 2-331 Replicon: chromosome
Accession: NZ_CP110117 Location: 3885009..3900289 Organism: Escherichia coli strain 2-331 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (3880597) | 3880597..3880677 | - | 81 | NuclAT_11 | - | - |
| - (3880597) | 3880597..3880677 | - | 81 | NuclAT_11 | - | - |
| - (3880597) | 3880597..3880677 | - | 81 | NuclAT_11 | - | - |
| - (3880597) | 3880597..3880677 | - | 81 | NuclAT_11 | - | - |
| OMD12_RS19030 (3881273) | 3881273..3881731 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| OMD12_RS19035 (3881992) | 3881992..3883449 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| OMD12_RS19040 (3883506) | 3883506..3884027 | - | 522 | Protein_3730 | peptide chain release factor H | - |
| OMD12_RS19045 (3884023) | 3884023..3884229 | - | 207 | Protein_3731 | RtcB family protein | - |
| OMD12_RS19050 (3884547) | 3884547..3884999 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| OMD12_RS19055 (3885009) | 3885009..3885407 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| OMD12_RS19060 (3885410) | 3885410..3885703 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| OMD12_RS19065 (3885755) | 3885755..3886810 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| OMD12_RS19070 (3886881) | 3886881..3887666 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| OMD12_RS19075 (3887638) | 3887638..3889350 | + | 1713 | Protein_3737 | Flagellar biosynthesis protein FlhA | VF |
| OMD12_RS19080 (3889574) | 3889574..3890071 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| OMD12_RS19085 (3890247) | 3890247..3890996 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| OMD12_RS19090 (3891206) | 3891206..3891466 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| OMD12_RS19095 (3891469) | 3891469..3891747 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| OMD12_RS19100 (3891903) | 3891903..3892643 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| OMD12_RS19105 (3892614) | 3892614..3893381 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| OMD12_RS19110 (3893587) | 3893587..3894165 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| OMD12_RS19115 (3894405) | 3894405..3896849 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| OMD12_RS19120 (3896892) | 3896892..3897338 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| OMD12_RS19125 (3897519) | 3897519..3898289 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| OMD12_RS19130 (3898330) | 3898330..3899466 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| OMD12_RS19135 (3899897) | 3899897..3900289 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| OMD12_RS19140 (3900267) | 3900267..3904499 | - | 4233 | WP_039023185.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|