MGE detailed information
MGE type: IS/Tn MGE length: 1149 bp
Accession: NZ_CP110117 Location: 2554836..2555984 Organism: Escherichia coli strain 2-331 Replicon: chromosome
Accession: NZ_CP110117 Location: 2554836..2555984 Organism: Escherichia coli strain 2-331 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OMD12_RS12355 (2550239) | 2550239..2550415 | - | 177 | WP_001447010.1 | type II toxin-antitoxin system mRNA interferase toxin HicA | Toxin Detail |
| OMD12_RS12360 (2550637) | 2550637..2550867 | + | 231 | WP_000494244.1 | YncJ family protein | - |
| OMD12_RS12365 (2550959) | 2550959..2552920 | - | 1962 | WP_001303492.1 | 23S rRNA 5-hydroxycytidine C2501 synthase | - |
| OMD12_RS12370 (2552993) | 2552993..2553529 | - | 537 | WP_000429155.1 | DNA-binding transcriptional regulator SutR | - |
| OMD12_RS12375 (2553621) | 2553621..2554796 | + | 1176 | WP_001236265.1 | BenE family transporter YdcO | - |
| OMD12_RS12380 (2554836) | 2554836..2556044 | - | 1209 | WP_000826421.1 | IS200-IS605 family transposase IS609 | Transposase |
| OMD12_RS12385 (2556052) | 2556052..2556477 | + | 426 | Protein_2427 | IS200/IS605 family transposase | - |
| OMD12_RS12390 (2556576) | 2556576..2557244 | - | 669 | WP_001261013.1 | DUF3313 domain-containing protein | - |
| OMD12_RS12395 (2557546) | 2557546..2558139 | - | 594 | WP_000586732.1 | tellurite resistance methyltransferase TehB | - |
| OMD12_RS12400 (2558136) | 2558136..2559128 | - | 993 | WP_024176452.1 | dicarboxylate transporter/tellurite-resistance protein TehA | - |
| OMD12_RS12405 (2559252) | 2559252..2560232 | + | 981 | WP_001234042.1 | YdcK family protein | - |
| OMD12_RS12410 (2560224) | 2560224..2560763 | - | 540 | WP_000140873.1 | 50S ribosomal protein L7/L12-serine acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | IS/Tn | TA75073 | NZ_CP020543 | 2433298..2434446 | 0.008 |