MGE detailed information
MGE type: Genomic_island MGE length: 16253 bp
Accession: NZ_CP110017 Location: 4635185..4651437 Organism: Escherichia coli strain HE_50 Replicon: chromosome
Accession: NZ_CP110017 Location: 4635185..4651437 Organism: Escherichia coli strain HE_50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR76_RS22665 (4630876) | 4630876..4632189 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| OLR76_RS22670 (4632201) | 4632201..4632479 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OLR76_RS22675 (4632476) | 4632476..4633597 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OLR76_RS22680 (4633842) | 4633842..4633958 | - | 117 | Protein_4416 | VOC family protein | - |
| OLR76_RS22685 (4633996) | 4633996..4634214 | - | 219 | Protein_4417 | hypothetical protein | - |
| OLR76_RS22690 (4634383) | 4634383..4635129 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| OLR76_RS22695 (4635185) | 4635185..4635730 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OLR76_RS22700 (4635742) | 4635742..4635999 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OLR76_RS22705 (4636490) | 4636490..4636621 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| OLR76_RS22710 (4636737) | 4636737..4637977 | + | 1241 | Protein_4422 | helicase YjhR | - |
| OLR76_RS22715 (4638245) | 4638245..4638450 | - | 206 | Protein_4423 | HNH endonuclease | - |
| OLR76_RS22720 (4638560) | 4638560..4639540 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OLR76_RS22725 (4639605) | 4639605..4640711 | - | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| OLR76_RS22730 (4640731) | 4640731..4641447 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OLR76_RS22735 (4642717) | 4642717..4643925 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| OLR76_RS22740 (4644032) | 4644032..4646041 | - | 2010 | Protein_4428 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| OLR76_RS22745 (4646295) | 4646295..4646789 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| OLR76_RS22750 (4646838) | 4646838..4647575 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| OLR76_RS22755 (4647578) | 4647578..4648117 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| OLR76_RS22760 (4648224) | 4648224..4648697 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| OLR76_RS22765 (4648688) | 4648688..4649458 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| OLR76_RS22770 (4650077) | 4650077..4650802 | + | 726 | WP_282983389.1 | Putative transcription factor YjjQ | VF |
| OLR76_RS22775 (4650760) | 4650760..4651437 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| OLR76_RS22780 (4651475) | 4651475..4652263 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| OLR76_RS22785 (4652404) | 4652404..4652640 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| OLR76_RS22805 (4653269) | 4653269..4654300 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| OLR76_RS22810 (4654403) | 4654403..4654816 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| OLR76_RS22815 (4654785) | 4654785..4655231 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OLR76_RS22820 (4655246) | 4655246..4655923 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |