MGE detailed information
MGE type: Genomic_island MGE length: 16252 bp
Accession: NZ_CP110016 Location: 4635178..4651429 Organism: Escherichia coli strain HE_100 Replicon: chromosome
Accession: NZ_CP110016 Location: 4635178..4651429 Organism: Escherichia coli strain HE_100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR74_RS22675 (4630869) | 4630869..4632182 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| OLR74_RS22680 (4632194) | 4632194..4632472 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OLR74_RS22685 (4632469) | 4632469..4633590 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OLR74_RS22690 (4633835) | 4633835..4633951 | - | 117 | Protein_4418 | VOC family protein | - |
| OLR74_RS22695 (4633989) | 4633989..4634207 | - | 219 | Protein_4419 | hypothetical protein | - |
| OLR74_RS22700 (4634376) | 4634376..4635122 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| OLR74_RS22705 (4635178) | 4635178..4635723 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OLR74_RS22710 (4635735) | 4635735..4635992 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OLR74_RS22715 (4636483) | 4636483..4636614 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| OLR74_RS22720 (4636730) | 4636730..4637970 | + | 1241 | Protein_4424 | helicase YjhR | - |
| OLR74_RS22725 (4638238) | 4638238..4638443 | - | 206 | Protein_4425 | HNH endonuclease | - |
| OLR74_RS22730 (4638553) | 4638553..4639533 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OLR74_RS22735 (4639598) | 4639598..4640703 | - | 1106 | Protein_4427 | N-acetylneuraminate epimerase | - |
| OLR74_RS22740 (4640723) | 4640723..4641439 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OLR74_RS22745 (4642709) | 4642709..4643917 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| OLR74_RS22750 (4644024) | 4644024..4646033 | - | 2010 | Protein_4430 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| OLR74_RS22755 (4646287) | 4646287..4646781 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| OLR74_RS22760 (4646830) | 4646830..4647567 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| OLR74_RS22765 (4647570) | 4647570..4648109 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| OLR74_RS22770 (4648216) | 4648216..4648689 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| OLR74_RS22775 (4648680) | 4648680..4649450 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| OLR74_RS22780 (4650069) | 4650069..4650794 | + | 726 | WP_282983389.1 | Putative transcription factor YjjQ | VF |
| OLR74_RS22785 (4650752) | 4650752..4651429 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| OLR74_RS22790 (4651467) | 4651467..4652255 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| OLR74_RS22795 (4652396) | 4652396..4652632 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| OLR74_RS22815 (4653261) | 4653261..4654292 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| OLR74_RS22820 (4654395) | 4654395..4654808 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| OLR74_RS22825 (4654777) | 4654777..4655223 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OLR74_RS22830 (4655238) | 4655238..4655915 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |