MGE detailed information
MGE type: Genomic_island MGE length: 16252 bp
Accession: NZ_CP110015 Location: 4635183..4651434 Organism: Escherichia coli strain HE_150 Replicon: chromosome
Accession: NZ_CP110015 Location: 4635183..4651434 Organism: Escherichia coli strain HE_150 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR73_RS22665 (4630874) | 4630874..4632187 | - | 1314 | WP_283012230.1 | PTS sugar transporter subunit IIC SgcC | - |
| OLR73_RS22670 (4632199) | 4632199..4632477 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OLR73_RS22675 (4632474) | 4632474..4633595 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OLR73_RS22680 (4633840) | 4633840..4633956 | - | 117 | Protein_4416 | VOC family protein | - |
| OLR73_RS22685 (4633994) | 4633994..4634212 | - | 219 | Protein_4417 | hypothetical protein | - |
| OLR73_RS22690 (4634381) | 4634381..4635127 | - | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| OLR73_RS22695 (4635183) | 4635183..4635728 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OLR73_RS22700 (4635740) | 4635740..4635997 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OLR73_RS22705 (4636488) | 4636488..4636619 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| OLR73_RS22710 (4636735) | 4636735..4637975 | + | 1241 | Protein_4422 | helicase YjhR | - |
| OLR73_RS22715 (4638243) | 4638243..4638448 | - | 206 | Protein_4423 | HNH endonuclease | - |
| OLR73_RS22720 (4638558) | 4638558..4639538 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OLR73_RS22725 (4639603) | 4639603..4640708 | - | 1106 | Protein_4425 | N-acetylneuraminate epimerase | - |
| OLR73_RS22730 (4640728) | 4640728..4641444 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OLR73_RS22735 (4642714) | 4642714..4643922 | - | 1209 | WP_283012231.1 | IS4 family transposase IS10R | Transposase |
| OLR73_RS22740 (4644029) | 4644029..4646038 | - | 2010 | Protein_4428 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| OLR73_RS22745 (4646292) | 4646292..4646786 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| OLR73_RS22750 (4646835) | 4646835..4647572 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| OLR73_RS22755 (4647575) | 4647575..4648114 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| OLR73_RS22760 (4648221) | 4648221..4648694 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| OLR73_RS22765 (4648685) | 4648685..4649455 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| OLR73_RS22770 (4650074) | 4650074..4650799 | + | 726 | WP_282983389.1 | Putative transcription factor YjjQ | VF |
| OLR73_RS22775 (4650757) | 4650757..4651434 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| OLR73_RS22780 (4651472) | 4651472..4652260 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| OLR73_RS22785 (4652401) | 4652401..4652637 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| OLR73_RS22805 (4653266) | 4653266..4654297 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| OLR73_RS22810 (4654400) | 4654400..4654813 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| OLR73_RS22815 (4654782) | 4654782..4655228 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OLR73_RS22820 (4655243) | 4655243..4655920 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |