MGE detailed information
MGE type: Genomic_island MGE length: 16252 bp
Accession: NZ_CP110014 Location: 4635171..4651422 Organism: Escherichia coli strain HE_100-10 Replicon: chromosome
Accession: NZ_CP110014 Location: 4635171..4651422 Organism: Escherichia coli strain HE_100-10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OLR77_RS22670 (4630862) | 4630862..4632175 | - | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| OLR77_RS22675 (4632187) | 4632187..4632465 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| OLR77_RS22680 (4632462) | 4632462..4633583 | - | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| OLR77_RS22685 (4633828) | 4633828..4633944 | - | 117 | Protein_4417 | VOC family protein | - |
| OLR77_RS22690 (4633982) | 4633982..4634200 | - | 219 | Protein_4418 | hypothetical protein | - |
| OLR77_RS22695 (4634369) | 4634369..4635115 | - | 747 | WP_282992804.1 | class I SAM-dependent methyltransferase | - |
| OLR77_RS22700 (4635171) | 4635171..4635716 | - | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| OLR77_RS22705 (4635728) | 4635728..4635985 | - | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| OLR77_RS22710 (4636476) | 4636476..4636607 | - | 132 | WP_001309182.1 | hypothetical protein | - |
| OLR77_RS22715 (4636723) | 4636723..4637963 | + | 1241 | Protein_4423 | helicase YjhR | - |
| OLR77_RS22720 (4638231) | 4638231..4638436 | - | 206 | Protein_4424 | HNH endonuclease | - |
| OLR77_RS22725 (4638546) | 4638546..4639526 | - | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| OLR77_RS22730 (4639591) | 4639591..4640696 | - | 1106 | Protein_4426 | N-acetylneuraminate epimerase | - |
| OLR77_RS22735 (4640716) | 4640716..4641432 | - | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| OLR77_RS22740 (4642702) | 4642702..4643910 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| OLR77_RS22745 (4644017) | 4644017..4646026 | - | 2010 | Protein_4429 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| OLR77_RS22750 (4646280) | 4646280..4646774 | - | 495 | WP_001308243.1 | DUF2501 domain-containing protein YjjA | - |
| OLR77_RS22755 (4646823) | 4646823..4647560 | - | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| OLR77_RS22760 (4647563) | 4647563..4648102 | - | 540 | WP_000098818.1 | primosomal protein DnaT | - |
| OLR77_RS22765 (4648209) | 4648209..4648682 | - | 474 | WP_000538191.1 | threonine/serine exporter | - |
| OLR77_RS22770 (4648673) | 4648673..4649443 | - | 771 | WP_001338213.1 | threonine/serine exporter ThrE family protein | - |
| OLR77_RS22775 (4650062) | 4650062..4650787 | + | 726 | WP_282983389.1 | Putative transcription factor YjjQ | VF |
| OLR77_RS22780 (4650745) | 4650745..4651422 | + | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| OLR77_RS22785 (4651460) | 4651460..4652248 | - | 789 | WP_000331618.1 | siderophore-iron reductase FhuF | - |
| OLR77_RS22790 (4652389) | 4652389..4652625 | + | 237 | WP_001393508.1 | DUF1435 domain-containing protein | - |
| OLR77_RS22810 (4653254) | 4653254..4654285 | - | 1032 | WP_001272330.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| OLR77_RS22815 (4654388) | 4654388..4654801 | + | 414 | WP_000204012.1 | DNA polymerase III subunit psi | - |
| OLR77_RS22820 (4654770) | 4654770..4655216 | + | 447 | WP_001092461.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| OLR77_RS22825 (4655231) | 4655231..4655908 | + | 678 | WP_000870710.1 | pyrimidine 5'-nucleotidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20047 | CP009789 | 4505469..4521845 | 0.002 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22706 | NC_010473 | 4633070..4649322 | 0 |