MGE detailed information
MGE type: Genomic_island MGE length: 13212 bp
Accession: NZ_CP109947 Location: 1175436..1188647 Organism: Pectobacterium cacticida strain CFCC10813 Replicon: chromosome
Accession: NZ_CP109947 Location: 1175436..1188647 Organism: Pectobacterium cacticida strain CFCC10813 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OI450_RS05475 (OI450_05475) | 1171442..1172056 | + | 615 | WP_264498134.1 | YrbL family protein | - |
| OI450_RS05480 (OI450_05480) | 1172295..1173173 | + | 879 | WP_264498135.1 | NAD(P)-dependent oxidoreductase | - |
| OI450_RS05485 (OI450_05485) | 1173489..1173980 | + | 492 | WP_264498136.1 | YhfG family protein | - |
| OI450_RS05490 (OI450_05490) | 1173973..1174557 | + | 585 | WP_264498137.1 | putative adenosine monophosphate-protein transferase Fic | - |
| OI450_RS05495 (OI450_05495) | 1174680..1174826 | + | 147 | WP_264498138.1 | hypothetical protein | - |
| OI450_RS05500 (OI450_05500) | 1174930..1175187 | - | 258 | WP_039351569.1 | BrnA antitoxin family protein | - |
| OI450_RS05505 (OI450_05505) | 1175260..1175487 | - | 228 | Protein_1054 | hypothetical protein | - |
| OI450_RS05510 (OI450_05510) | 1175487..1175903 | - | 417 | Protein_1055 | Prophage integrase IntS ; Integrase | Integrase |
| OI450_RS05515 (OI450_05515) | 1176027..1176425 | - | 399 | WP_209428711.1 | type II toxin-antitoxin system YafO family toxin | Toxin Detail |
| OI450_RS05520 (OI450_05520) | 1176428..1176721 | - | 294 | WP_027711146.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| OI450_RS05525 (OI450_05525) | 1176982..1177722 | + | 741 | WP_264498139.1 | hypothetical protein | - |
| OI450_RS05530 (OI450_05530) | 1178067..1178231 | + | 165 | WP_264498140.1 | hypothetical protein | - |
| OI450_RS05535 (OI450_05535) | 1178281..1178745 | - | 465 | WP_264498141.1 | DUF6392 family protein | - |
| OI450_RS05540 (OI450_05540) | 1178745..1180553 | - | 1809 | WP_264498142.1 | S-type pyocin domain-containing protein | - |
| OI450_RS05545 (OI450_05545) | 1180869..1182440 | - | 1572 | WP_264498143.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| OI450_RS05550 (OI450_05550) | 1182546..1183112 | - | 567 | WP_264498144.1 | type 4 pilus major pilin | - |
| OI450_RS05555 (OI450_05555) | 1183390..1183794 | + | 405 | WP_264498145.1 | H-NS family nucleoid-associated regulatory protein | - |
| OI450_RS05560 (OI450_05560) | 1183882..1184151 | - | 270 | WP_264498146.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| OI450_RS05565 (OI450_05565) | 1184153..1184404 | - | 252 | WP_264498147.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| OI450_RS05570 (OI450_05570) | 1184603..1184857 | + | 255 | Protein_1067 | YegP family protein | - |
| OI450_RS05575 (OI450_05575) | 1184937..1185485 | + | 549 | WP_264498148.1 | hypothetical protein | - |
| OI450_RS05580 (OI450_05580) | 1185626..1186834 | + | 1209 | WP_264495962.1 | IS256 family transposase ISEc39 | Transposase |
| OI450_RS05585 (OI450_05585) | 1186883..1187278 | - | 396 | WP_264498149.1 | hypothetical protein | - |
| OI450_RS05590 (OI450_05590) | 1187324..1187569 | - | 246 | WP_264498150.1 | DNA-binding protein | - |
| OI450_RS05595 (OI450_05595) | 1187638..1187940 | - | 303 | WP_039325217.1 | hypothetical protein | - |
| OI450_RS05600 (OI450_05600) | 1188013..1188297 | - | 285 | WP_264498151.1 | hypothetical protein | - |
| OI450_RS05605 (OI450_05605) | 1188447..1188647 | - | 201 | WP_264498152.1 | AlpA family transcriptional regulator | - |
| OI450_RS05610 (OI450_05610) | 1188974..1190188 | - | 1215 | WP_264498153.1 | tyrosine-type recombinase/integrase | - |
| OI450_RS05620 (OI450_05620) | 1190627..1191880 | - | 1254 | WP_264498154.1 | glutamate-5-semialdehyde dehydrogenase | - |
| OI450_RS05625 (OI450_05625) | 1191891..1192994 | - | 1104 | WP_264498155.1 | glutamate 5-kinase | - |
| OI450_RS05630 (OI450_05630) | 1193115..1193489 | - | 375 | WP_264498156.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|