MGE detailed information
MGE type: Prophage MGE length: 55810 bp
Accession: NZ_CP109933 Location: 1713591..1769400 Organism: Staphylococcus aureus strain SASWT1215 Replicon: chromosome
Accession: NZ_CP109933 Location: 1713591..1769400 Organism: Staphylococcus aureus strain SASWT1215 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NT398_RS08660 (1708902) | 1708902..1709234 | - | 333 | WP_000731878.1 | glycine cleavage system protein H | - |
| NT398_RS08665 (1709268) | 1709268..1710269 | - | 1002 | WP_000240063.1 | LLM class flavin-dependent oxidoreductase | - |
| NT398_RS08670 (1710383) | 1710383..1710475 | - | 93 | WP_001802007.1 | hypothetical protein | - |
| NT398_RS08675 (1710571) | 1710571..1711770 | + | 1200 | WP_000286459.1 | NADH-dependent flavin oxidoreductase | - |
| NT398_RS08680 (1711843) | 1711843..1712670 | + | 828 | WP_000136054.1 | alpha/beta hydrolase | - |
| NT398_RS08685 (1712912) | 1712912..1713034 | - | 123 | WP_000346420.1 | hypothetical protein | - |
| NT398_RS08690 (1713591) | 1713591..1715045 | - | 1455 | WP_094314235.1 | N-acetylmuramoyl-L-alanine amidase | - |
| NT398_RS08695 (1715057) | 1715057..1715359 | - | 303 | WP_000339146.1 | phage holin | - |
| NT398_RS08700 (1715494) | 1715494..1715793 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| NT398_RS08705 (1715839) | 1715839..1716003 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| NT398_RS08710 (1715996) | 1715996..1716385 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| NT398_RS08715 (1716385) | 1716385..1717851 | - | 1467 | WP_000067132.1 | BppU family phage baseplate upper protein | - |
| NT398_RS08720 (1717851) | 1717851..1719761 | - | 1911 | WP_089519209.1 | hypothetical protein | - |
| NT398_RS08725 (1719777) | 1719777..1720067 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| NT398_RS08730 (1720067) | 1720067..1721650 | - | 1584 | WP_161081390.1 | prophage endopeptidase tail family protein | - |
| NT398_RS08735 (1721659) | 1721659..1722483 | - | 825 | WP_161081391.1 | phage tail family protein | - |
| NT398_RS08740 (1722483) | 1722483..1728683 | - | 6201 | WP_031860857.1 | phage tail tape measure protein | - |
| NT398_RS08745 (1728697) | 1728697..1728855 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| NT398_RS08750 (1728897) | 1728897..1729247 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| NT398_RS08755 (1729305) | 1729305..1729760 | - | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| NT398_RS08760 (1729852) | 1729852..1730493 | - | 642 | WP_000807536.1 | phage tail protein | - |
| NT398_RS08765 (1730528) | 1730528..1730923 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| NT398_RS08770 (1730924) | 1730924..1731325 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| NT398_RS08775 (1731322) | 1731322..1731654 | - | 333 | WP_000395498.1 | hypothetical protein | - |
| NT398_RS08780 (1731666) | 1731666..1731944 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| NT398_RS08785 (1732013) | 1732013..1733176 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| NT398_RS08790 (1733188) | 1733188..1733961 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| NT398_RS08795 (1733945) | 1733945..1735183 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| NT398_RS08800 (1735188) | 1735188..1736879 | - | 1692 | WP_000152858.1 | terminase large subunit | - |
| NT398_RS08805 (1736869) | 1736869..1737174 | - | 306 | WP_000778935.1 | P27 family phage terminase small subunit | - |
| NT398_RS08810 (1737299) | 1737299..1737619 | - | 321 | WP_000596031.1 | HNH endonuclease signature motif containing protein | - |
| NT398_RS08815 (1737776) | 1737776..1738213 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| NT398_RS08820 (1738226) | 1738226..1739593 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| NT398_RS08825 (1739574) | 1739574..1739864 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| NT398_RS08830 (1739998) | 1739998..1740096 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| NT398_RS08835 (1740205) | 1740205..1742652 | - | 2448 | WP_000884870.1 | VapE family protein | - |
| NT398_RS08840 (1742940) | 1742940..1743140 | - | 201 | WP_000265252.1 | DUF1514 family protein | - |
| NT398_RS08845 (1743208) | 1743208..1743360 | - | 153 | WP_000595263.1 | transcriptional activator RinB | - |
| NT398_RS08850 (1743357) | 1743357..1743563 | - | 207 | WP_000195810.1 | DUF1381 domain-containing protein | - |
| NT398_RS08855 (1743600) | 1743600..1744133 | - | 534 | WP_063653166.1 | dUTPase | - |
| NT398_RS08860 (1744148) | 1744148..1744309 | - | 162 | WP_000889684.1 | hypothetical protein | - |
| NT398_RS08865 (1744310) | 1744310..1744483 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin Detail |
| NT398_RS08870 (1744473) | 1744473..1744724 | - | 252 | WP_031267622.1 | DUF1024 family protein | Toxin Detail |
| NT398_RS08875 (1744717) | 1744717..1745024 | - | 308 | Protein_1711 | hypothetical protein | - |
| NT398_RS08880 (1745021) | 1745021..1745368 | - | 348 | WP_000979209.1 | YopX family protein | - |
| NT398_RS08885 (1745365) | 1745365..1745745 | - | 381 | WP_001668982.1 | hypothetical protein | - |
| NT398_RS08890 (1745748) | 1745748..1745954 | - | 207 | WP_000693989.1 | hypothetical protein | - |
| NT398_RS08895 (1745968) | 1745968..1746216 | - | 249 | WP_060474161.1 | SAV1978 family virulence-associated passenger protein | - |
| NT398_RS08900 (1746216) | 1746216..1746470 | - | 255 | WP_000022722.1 | DUF3310 domain-containing protein | - |
| NT398_RS08905 (1746467) | 1746467..1746871 | - | 405 | WP_044426014.1 | SA1788 family PVL leukocidin-associated protein | - |
| NT398_RS08910 (1746871) | 1746871..1747056 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| NT398_RS08915 (1747069) | 1747069..1749021 | - | 1953 | WP_161081393.1 | DNA polymerase | - |
| NT398_RS08920 (1749090) | 1749090..1749647 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| NT398_RS08925 (1749673) | 1749673..1750839 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| NT398_RS08930 (1750836) | 1750836..1751198 | - | 363 | WP_000985976.1 | hypothetical protein | - |
| NT398_RS08935 (1751213) | 1751213..1751536 | - | 324 | WP_000174994.1 | hypothetical protein | - |
| NT398_RS08940 (1751615) | 1751615..1751776 | - | 162 | WP_001285963.1 | DUF1270 family protein | - |
| NT398_RS08945 (1751789) | 1751789..1752052 | - | 264 | WP_001124159.1 | helix-turn-helix domain-containing protein | - |
| NT398_RS08950 (1752107) | 1752107..1752316 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| NT398_RS08955 (1752306) | 1752306..1752449 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| NT398_RS08960 (1752540) | 1752540..1752755 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| NT398_RS08965 (1752810) | 1752810..1753175 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| NT398_RS08970 (1753144) | 1753144..1753389 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| NT398_RS08975 (1753439) | 1753439..1753657 | - | 219 | WP_001001383.1 | hypothetical protein | - |
| NT398_RS08980 (1753673) | 1753673..1754449 | - | 777 | WP_061389040.1 | phage antirepressor | - |
| NT398_RS08985 (1754465) | 1754465..1754683 | - | 219 | WP_001198673.1 | helix-turn-helix transcriptional regulator | - |
| NT398_RS08990 (1754825) | 1754825..1755547 | + | 723 | WP_024936995.1 | XRE family transcriptional regulator | - |
| NT398_RS08995 (1755559) | 1755559..1755705 | + | 147 | WP_001049401.1 | hypothetical protein | - |
| NT398_RS09000 (1755702) | 1755702..1755887 | + | 186 | WP_024936996.1 | hypothetical protein | - |
| NT398_RS09005 (1755943) | 1755943..1756527 | + | 585 | WP_161081411.1 | hypothetical protein | - |
| NT398_RS09010 (1756757) | 1756757..1756903 | + | 147 | WP_078367450.1 | hypothetical protein | - |
| NT398_RS09015 (1756900) | 1756900..1757514 | - | 615 | WP_031808062.1 | hypothetical protein | - |
| NT398_RS09020 (1757624) | 1757624..1758829 | + | 1206 | WP_099560862.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| NT398_RS09025 (1758923) | 1758923..1760857 | - | 1935 | Protein_1741 | Lipase 2 | VF |
| NT398_RS09030 (1761275) | 1761275..1762588 | + | 1314 | WP_001077725.1 | YjiH family protein | - |
| NT398_RS09035 (1762719) | 1762719..1763387 | - | 669 | WP_000936718.1 | N-acetylmannosamine-6-phosphate 2-epimerase | - |
| NT398_RS09040 (1763527) | 1763527..1764327 | + | 801 | Protein_1744 | MurR/RpiR family transcriptional regulator | - |
| NT398_RS09045 (1764604) | 1764604..1765464 | - | 861 | WP_000291444.1 | ROK family protein | - |
| NT398_RS09050 (1765622) | 1765622..1766503 | + | 882 | WP_001030736.1 | N-acetylneuraminate lyase | - |
| NT398_RS09055 (1766543) | 1766543..1768075 | + | 1533 | WP_000665727.1 | sodium:solute symporter | - |
| NT398_RS09060 (1768180) | 1768180..1769400 | - | 1221 | WP_001022972.1 | NupC/NupG family nucleoside CNT transporter | - |
| NT398_RS09065 (1769411) | 1769411..1770334 | - | 924 | WP_000002071.1 | pseudouridine-5'-phosphate glycosidase | - |
| NT398_RS09070 (1770309) | 1770309..1771427 | - | 1119 | WP_001283968.1 | winged helix-turn-helix transcriptional regulator | - |
| NT398_RS09075 (1771770) | 1771770..1772759 | - | 990 | WP_001822575.1 | PTS sugar transporter subunit IIC | - |
| NT398_RS09080 (1772710) | 1772710..1772850 | + | 141 | WP_072353785.1 | hypothetical protein | - |
| NT398_RS09085 (1773009) | 1773009..1773686 | - | 678 | WP_000911017.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|