MGE detailed information
MGE type: Prophage MGE length: 40711 bp
Accession: NZ_CP109891 Location: 1155053..1195763 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Accession: NZ_CP109891 Location: 1155053..1195763 Organism: Xylella fastidiosa subsp. fastidiosa strain CFBP8083 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OK113_RS04910 (OK113_04910) | 1150340..1150594 | - | 255 | WP_004089715.1 | hypothetical protein | - |
| OK113_RS04915 (OK113_04915) | 1150768..1151043 | - | 276 | WP_228446175.1 | helix-turn-helix domain-containing protein | - |
| OK113_RS04920 (OK113_04920) | 1151826..1152332 | - | 507 | WP_236641888.1 | hypothetical protein | - |
| OK113_RS04925 (OK113_04925) | 1152320..1152691 | - | 372 | WP_236641889.1 | hypothetical protein | - |
| OK113_RS04930 (OK113_04930) | 1153178..1154182 | - | 1005 | WP_128723193.1 | peptidase | - |
| OK113_RS04935 (OK113_04935) | 1154342..1154539 | - | 198 | WP_012382581.1 | hypothetical protein | - |
| OK113_RS04940 (OK113_04940) | 1155053..1156216 | - | 1164 | WP_038232954.1 | tail fiber protein | - |
| OK113_RS04945 (OK113_04945) | 1156220..1156780 | - | 561 | WP_014607744.1 | DUF2612 domain-containing protein | - |
| OK113_RS04950 (OK113_04950) | 1156777..1156977 | - | 201 | WP_236641891.1 | hypothetical protein | - |
| OK113_RS04955 (OK113_04955) | 1157028..1157912 | - | 885 | WP_236641892.1 | baseplate J/gp47 family protein | - |
| OK113_RS04960 (OK113_04960) | 1158011..1158307 | + | 297 | WP_004089252.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK113_RS04965 (OK113_04965) | 1158311..1158616 | + | 306 | WP_004089254.1 | putative addiction module antidote protein | Antitoxin Detail |
| OK113_RS04970 (OK113_04970) | 1158627..1158980 | - | 354 | WP_011097986.1 | hypothetical protein | - |
| OK113_RS04975 (OK113_04975) | 1158977..1159618 | - | 642 | WP_004090764.1 | Gp138 family membrane-puncturing spike protein | - |
| OK113_RS04980 (OK113_04980) | 1159615..1160445 | - | 831 | WP_004090766.1 | hypothetical protein | - |
| OK113_RS04985 (OK113_04985) | 1160442..1160759 | - | 318 | WP_011097873.1 | hypothetical protein | - |
| OK113_RS04990 (OK113_04990) | 1160759..1161529 | - | 771 | WP_004090769.1 | hypothetical protein | - |
| OK113_RS04995 (OK113_04995) | 1161640..1161867 | + | 228 | WP_004091377.1 | DUF6290 family protein | Antitoxin Detail |
| OK113_RS05000 (OK113_05000) | 1161851..1162117 | + | 267 | WP_011097988.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OK113_RS05005 (OK113_05005) | 1162128..1163915 | - | 1788 | WP_243857829.1 | phage tail tape measure protein | - |
| OK113_RS05010 (OK113_05010) | 1163974..1164138 | - | 165 | WP_162849007.1 | hypothetical protein | - |
| OK113_RS05015 (OK113_05015) | 1164165..1164587 | - | 423 | WP_012382587.1 | putative phage tail assembly chaperone | - |
| OK113_RS05020 (OK113_05020) | 1164584..1165021 | - | 438 | WP_011097990.1 | DUF3277 family protein | - |
| OK113_RS05025 (OK113_05025) | 1165031..1166527 | - | 1497 | WP_038232978.1 | DUF3383 domain-containing protein | - |
| OK113_RS05030 (OK113_05030) | 1166528..1167061 | - | 534 | WP_004090297.1 | hypothetical protein | - |
| OK113_RS05035 (OK113_05035) | 1166985..1167353 | - | 369 | WP_004090296.1 | hypothetical protein | - |
| OK113_RS05040 (OK113_05040) | 1167340..1167660 | - | 321 | WP_236641894.1 | hypothetical protein | - |
| OK113_RS05045 (OK113_05045) | 1167816..1168184 | - | 369 | WP_004090294.1 | DUF4054 domain-containing protein | - |
| OK113_RS05050 (OK113_05050) | 1168184..1168537 | - | 354 | WP_011097882.1 | hypothetical protein | - |
| OK113_RS05055 (OK113_05055) | 1168601..1169584 | - | 984 | WP_004090291.1 | DUF2184 domain-containing protein | - |
| OK113_RS05060 (OK113_05060) | 1169594..1170076 | - | 483 | WP_004090290.1 | hypothetical protein | - |
| OK113_RS05065 (OK113_05065) | 1170086..1171294 | - | 1209 | WP_004090289.1 | DUF2213 domain-containing protein | - |
| OK113_RS05070 (OK113_05070) | 1171294..1172139 | - | 846 | WP_004090288.1 | phage head morphogenesis protein | - |
| OK113_RS05075 (OK113_05075) | 1172208..1172546 | + | 339 | WP_011097884.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OK113_RS05080 (OK113_05080) | 1172543..1172824 | + | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| OK113_RS05085 (OK113_05085) | 1172873..1174261 | - | 1389 | WP_178086806.1 | DUF1073 domain-containing protein | - |
| OK113_RS05090 (OK113_05090) | 1174258..1175808 | - | 1551 | WP_004090279.1 | phage terminase large subunit | - |
| OK113_RS05095 (OK113_05095) | 1175798..1176157 | - | 360 | WP_004090276.1 | hypothetical protein | - |
| OK113_RS05100 (OK113_05100) | 1176249..1176413 | - | 165 | WP_012382595.1 | hypothetical protein | - |
| OK113_RS05105 (OK113_05105) | 1176463..1176924 | - | 462 | WP_011097892.1 | hypothetical protein | - |
| OK113_RS05110 (OK113_05110) | 1176914..1177243 | - | 330 | WP_011097893.1 | phage holin family protein | - |
| OK113_RS05115 (OK113_05115) | 1177236..1177733 | - | 498 | WP_004089579.1 | lysozyme | - |
| OK113_RS05120 (OK113_05120) | 1177937..1178275 | - | 339 | WP_004089578.1 | BrnA antitoxin family protein | - |
| OK113_RS05125 (OK113_05125) | 1178262..1178528 | - | 267 | WP_004089577.1 | BrnT family toxin | - |
| OK113_RS05130 (OK113_05130) | 1178717..1179415 | - | 699 | WP_011097895.1 | hypothetical protein | - |
| OK113_RS05135 (OK113_05135) | 1179544..1180005 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| OK113_RS05140 (OK113_05140) | 1180002..1180691 | - | 690 | WP_011098061.1 | hypothetical protein | - |
| OK113_RS05145 (OK113_05145) | 1180672..1181559 | - | 888 | WP_012382597.1 | YdaU family protein | - |
| OK113_RS05150 (OK113_05150) | 1181556..1182344 | - | 789 | WP_011097897.1 | Bro-N domain-containing protein | - |
| OK113_RS05155 (OK113_05155) | 1182341..1182973 | - | 633 | WP_004088094.1 | Bro-N domain-containing protein | - |
| OK113_RS05160 (OK113_05160) | 1182970..1183233 | - | 264 | WP_228446177.1 | hypothetical protein | - |
| OK113_RS05165 (OK113_05165) | 1183251..1183466 | - | 216 | WP_012382598.1 | hypothetical protein | - |
| OK113_RS05170 (OK113_05170) | 1183496..1183684 | - | 189 | WP_004088102.1 | hypothetical protein | - |
| OK113_RS05175 (OK113_05175) | 1183712..1183903 | - | 192 | WP_004088104.1 | hypothetical protein | - |
| OK113_RS05180 (OK113_05180) | 1184162..1184407 | - | 246 | WP_004088108.1 | hypothetical protein | - |
| OK113_RS05185 (OK113_05185) | 1184492..1185166 | + | 675 | WP_004088110.1 | helix-turn-helix transcriptional regulator | - |
| OK113_RS05190 (OK113_05190) | 1185217..1185828 | - | 612 | WP_004088112.1 | Fic/DOC family protein | Toxin Detail |
| OK113_RS05195 (OK113_05195) | 1185825..1186013 | - | 189 | WP_004088114.1 | antitoxin VbhA family protein | Antitoxin Detail |
| OK113_RS05200 (OK113_05200) | 1186405..1186941 | + | 537 | WP_038233020.1 | hypothetical protein | - |
| OK113_RS05205 (OK113_05205) | 1186938..1187351 | + | 414 | WP_004088056.1 | DUF1566 domain-containing protein | - |
| OK113_RS05210 (OK113_05210) | 1187348..1187749 | + | 402 | WP_004088054.1 | hypothetical protein | - |
| OK113_RS05215 (OK113_05215) | 1187746..1187895 | + | 150 | WP_012382602.1 | hypothetical protein | - |
| OK113_RS05220 (OK113_05220) | 1188113..1188259 | + | 147 | WP_225621633.1 | hypothetical protein | - |
| OK113_RS05225 (OK113_05225) | 1188282..1188473 | + | 192 | WP_012382603.1 | hypothetical protein | - |
| OK113_RS05230 (OK113_05230) | 1188494..1188838 | + | 345 | WP_004088346.1 | hypothetical protein | - |
| OK113_RS05235 (OK113_05235) | 1188878..1189699 | + | 822 | WP_004088345.1 | DUF2303 family protein | - |
| OK113_RS05240 (OK113_05240) | 1189715..1190641 | + | 927 | WP_004088344.1 | phage recombination protein Bet | - |
| OK113_RS05245 (OK113_05245) | 1190638..1192290 | + | 1653 | WP_004088343.1 | YqaJ viral recombinase family protein | - |
| OK113_RS05250 (OK113_05250) | 1192328..1193083 | + | 756 | WP_004088342.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
| OK113_RS05255 (OK113_05255) | 1193344..1193964 | + | 621 | WP_004088341.1 | Bro-N domain-containing protein | - |
| OK113_RS05260 (OK113_05260) | 1194031..1194477 | + | 447 | WP_004088340.1 | single-stranded DNA-binding protein | - |
| OK113_RS05265 (OK113_05265) | 1194496..1194744 | + | 249 | WP_011097904.1 | DUF4224 domain-containing protein | - |
| OK113_RS05270 (OK113_05270) | 1194744..1195763 | + | 1020 | WP_011097905.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OK113_RS05275 (OK113_05275) | 1195905..1196954 | + | 1050 | WP_012382604.1 | ATP-binding protein | - |
| OK113_RS05280 (OK113_05280) | 1196947..1198374 | + | 1428 | WP_004572832.1 | nitrogen regulation protein NR(I) | - |
| OK113_RS05285 (OK113_05285) | 1198436..1199212 | - | 777 | Protein_1024 | Tn3 family transposase | - |
| OK113_RS05290 (OK113_05290) | 1199198..1200202 | + | 1005 | Protein_1025 | DNA topoisomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|