MGE detailed information
MGE type: Genomic_island MGE length: 64508 bp
Accession: NZ_CP107284 Location: 2964165..3028672 Organism: Escherichia coli strain SW4848 Replicon: chromosome
Accession: NZ_CP107284 Location: 2964165..3028672 Organism: Escherichia coli strain SW4848 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OF379_RS14415 (2959627) | 2959627..2960784 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| OF379_RS14420 (2960792) | 2960792..2962273 | - | 1482 | WP_001605229.1 | cardiolipin synthase ClsC | - |
| OF379_RS14425 (2962215) | 2962215..2962748 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| OF379_RS14430 (2962843) | 2962843..2963154 | - | 312 | WP_000489565.1 | type 1 fimbrial protein | - |
| OF379_RS14435 (2963275) | 2963275..2963607 | - | 333 | WP_000992814.1 | curli assembly chaperone CsgC | - |
| OF379_RS14440 (2963666) | 2963666..2964124 | - | 459 | WP_000771429.1 | curli major subunit CsgA | - |
| OF379_RS14445 (2964165) | 2964165..2964620 | - | 456 | WP_001469343.1 | Minor curlin subunit | VF |
| OF379_RS14450 (2965375) | 2965375..2966025 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| OF379_RS14455 (2966030) | 2966030..2966419 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| OF379_RS14460 (2966444) | 2966444..2966860 | + | 417 | WP_001264096.1 | Curli production assembly/transport component CsgF | VF |
| OF379_RS14465 (2966887) | 2966887..2967720 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| OF379_RS14470 (2967784) | 2967784..2968275 | - | 492 | WP_032159295.1 | DUF1097 domain-containing protein | - |
| OF379_RS14475 (2968377) | 2968377..2968931 | - | 555 | WP_001001926.1 | molecular chaperone YcdY | - |
| OF379_RS14480 (2968955) | 2968955..2969692 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| OF379_RS14485 (2969747) | 2969747..2970685 | - | 939 | WP_000351297.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| OF379_RS14495 (2971156) | 2971156..2971998 | - | 843 | WP_001431817.1 | DUF4942 domain-containing protein | - |
| OF379_RS14500 (2972083) | 2972083..2972280 | - | 198 | WP_000839253.1 | DUF957 domain-containing protein | - |
| OF379_RS14505 (2972297) | 2972297..2972785 | - | 489 | WP_001054233.1 | DUF5983 family protein | - |
| OF379_RS14510 (2972782) | 2972782..2973165 | - | 384 | WP_000854686.1 | TA system toxin CbtA family protein | Toxin Detail |
| OF379_RS14515 (2973246) | 2973246..2973626 | - | 381 | WP_001285602.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OF379_RS14520 (2973637) | 2973637..2974320 | - | 684 | WP_000086768.1 | hypothetical protein | - |
| OF379_RS14525 (2974339) | 2974339..2974560 | - | 222 | WP_000692298.1 | DUF987 domain-containing protein | - |
| OF379_RS14530 (2974623) | 2974623..2975099 | - | 477 | WP_001186773.1 | RadC family protein | - |
| OF379_RS14535 (2975115) | 2975115..2975600 | - | 486 | WP_000214307.1 | antirestriction protein | - |
| OF379_RS14540 (2975692) | 2975692..2976510 | - | 819 | WP_001234732.1 | DUF932 domain-containing protein | - |
| OF379_RS14545 (2976610) | 2976610..2976843 | - | 234 | WP_001119717.1 | DUF905 family protein | - |
| OF379_RS14550 (2976922) | 2976922..2977377 | - | 456 | WP_001504120.1 | IrmA family protein | - |
| OF379_RS14555 (2977453) | 2977453..2979969 | - | 2517 | WP_001716392.1 | hypothetical protein | - |
| OF379_RS14560 (2980090) | 2980090..2981225 | - | 1136 | Protein_2853 | autotransporter adhesin family protein | - |
| OF379_RS14565 (2981597) | 2981597..2982469 | - | 873 | WP_001397970.1 | GTPase family protein | - |
| OF379_RS14570 (2982784) | 2982784..2983230 | - | 447 | WP_236923173.1 | TetR/AcrR family transcriptional regulator | - |
| OF379_RS14575 (2983483) | 2983483..2984511 | + | 1029 | WP_237812879.1 | adenosine deaminase | - |
| OF379_RS14580 (2984508) | 2984508..2985062 | + | 555 | WP_001026099.1 | non-canonical purine NTP pyrophosphatase | - |
| OF379_RS14585 (2985062) | 2985062..2985856 | + | 795 | WP_023277477.1 | SIR2 family protein | - |
| OF379_RS14590 (2986175) | 2986175..2986777 | + | 603 | WP_001305361.1 | IS91 family transposase ISMno24 | Transposase |
| OF379_RS14595 (2987255) | 2987255..2988280 | + | 1026 | WP_157922034.1 | putative phage abortive infection protein | - |
| OF379_RS14600 (2988626) | 2988626..2989303 | + | 678 | WP_001299364.1 | IS66 family transposase ISCro1 | Transposase |
| OF379_RS14605 (2989303) | 2989303..2989650 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| OF379_RS14610 (2989670) | 2989670..2991241 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| OF379_RS14615 (2991542) | 2991542..2991973 | - | 432 | WP_023277481.1 | hypothetical protein | - |
| OF379_RS14620 (2992332) | 2992332..2992586 | - | 255 | WP_154670580.1 | hypothetical protein | - |
| OF379_RS14625 (2992868) | 2992868..2993107 | + | 240 | WP_001431807.1 | hypothetical protein | - |
| OF379_RS14630 (2993147) | 2993147..2995585 | + | 2439 | WP_000985465.1 | type I restriction-modification system subunit M | - |
| OF379_RS14635 (2995585) | 2995585..2996919 | + | 1335 | WP_083583150.1 | restriction endonuclease subunit S | - |
| OF379_RS14640 (2996932) | 2996932..2997588 | + | 657 | WP_000312833.1 | toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT | Toxin Detail |
| OF379_RS14645 (2997585) | 2997585..2998652 | + | 1068 | WP_021523959.1 | toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG | Antitoxin Detail |
| OF379_RS14650 (2998671) | 2998671..3001766 | + | 3096 | WP_087597364.1 | HsdR family type I site-specific deoxyribonuclease | - |
| OF379_RS14655 (3001766) | 3001766..3002482 | + | 717 | WP_001122107.1 | SprT family zinc-dependent metalloprotease | - |
| OF379_RS14660 (3002827) | 3002827..3003441 | + | 615 | Protein_2873 | IS3 family transposase ISSd1 | Transposase |
| OF379_RS14670 (3004921) | 3004921..3005280 | - | 360 | Protein_2875 | Serine protease EatA | VF |
| OF379_RS14675 (3005292) | 3005292..3006075 | + | 784 | Protein_2876 | IS5 family transposase | - |
| OF379_RS14680 (3006192) | 3006192..3006989 | - | 798 | WP_263955201.1 | AraC family transcriptional regulator | - |
| OF379_RS14685 (3007301) | 3007301..3007474 | - | 174 | Protein_2878 | transposase domain-containing protein | - |
| OF379_RS14690 (3007642) | 3007642..3007893 | - | 252 | Protein_2879 | integrase core domain-containing protein | - |
| OF379_RS14700 (3009154) | 3009154..3009360 | - | 207 | Protein_2881 | hypothetical protein | VF |
| OF379_RS14705 (3009858) | 3009858..3010310 | - | 453 | WP_263955202.1 | hypothetical protein | - |
| OF379_RS14710 (3010481) | 3010481..3010915 | - | 435 | WP_021523944.1 | Protein AggB | VF |
| OF379_RS14715 (3010931) | 3010931..3013528 | - | 2598 | WP_250663755.1 | F1 capsule-anchoring protein | VF |
| OF379_RS14720 (3013556) | 3013556..3014314 | - | 759 | WP_097497335.1 | Chaperone protein caf1M | VF |
| OF379_RS14725 (3014623) | 3014623..3014745 | - | 123 | Protein_2886 | IS630 family transposase | - |
| OF379_RS14730 (3014778) | 3014778..3016044 | + | 1267 | Protein_2887 | Vitamin B12 import ATP-binding protein BtuD | VF |
| OF379_RS14735 (3016148) | 3016148..3017377 | + | 1230 | WP_263955203.1 | Enterochelin esterase | VF |
| OF379_RS14740 (3017462) | 3017462..3018418 | + | 957 | WP_263955204.1 | hypothetical protein | VF |
| OF379_RS14745 (3018463) | 3018463..3019194 | - | 732 | Protein_2890 | Ferrienterobactin receptor | VF |
| OF379_RS14750 (3019242) | 3019242..3020612 | + | 1371 | Protein_2891 | IS3-like element IS150 family transposase | - |
| OF379_RS14755 (3020639) | 3020639..3020794 | - | 156 | Protein_2892 | TonB-dependent receptor | - |
| OF379_RS14760 (3021338) | 3021338..3022360 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| OF379_RS14765 (3022357) | 3022357..3023139 | + | 783 | WP_015683630.1 | IS21 family transposase IS100kyp | VF |
| OF379_RS14770 (3023212) | 3023212..3023367 | - | 156 | Protein_2895 | tellurite resistance protein | - |
| OF379_RS14775 (3023630) | 3023630..3023887 | - | 258 | Protein_2896 | replication endonuclease | - |
| OF379_RS14780 (3024295) | 3024295..3025308 | - | 1014 | WP_000107485.1 | aldose 1-epimerase family protein | - |
| OF379_RS14785 (3025320) | 3025320..3026636 | - | 1317 | WP_000998346.1 | L-fucose:H+ symporter permease | - |
| OF379_RS14790 (3026664) | 3026664..3027584 | - | 921 | WP_000350265.1 | ribokinase | - |
| OF379_RS14795 (3027890) | 3027890..3028672 | + | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| OF379_RS14800 (3028674) | 3028674..3028900 | - | 227 | Protein_2901 | acetolactate synthase small subunit | - |
| OF379_RS14805 (3029580) | 3029580..3029717 | - | 138 | WP_001411495.1 | hypothetical protein | - |
| OF379_RS14810 (3029867) | 3029867..3031034 | + | 1168 | Protein_2903 | UxaA family hydrolase | - |
| OF379_RS14815 (3031097) | 3031097..3031921 | - | 825 | WP_033872768.1 | aga operon transcriptional regulator AgaR | - |
| OF379_RS14820 (3032170) | 3032170..3032244 | + | 75 | Protein_2905 | aldolase | - |
| OF379_RS14825 (3032251) | 3032251..3032508 | + | 258 | Protein_2906 | class II fructose-bisphosphate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|