MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 64705 bp
Accession: NZ_CP107038 Location: 1126641..1191345 Organism: Streptococcus pneumoniae strain BM6001 Replicon: chromosome
Accession: NZ_CP107038 Location: 1126641..1191345 Organism: Streptococcus pneumoniae strain BM6001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ODS73_RS05770 (ODS73_05765) | 1126924..1127097 | + | 174 | WP_000159603.1 | hypothetical protein | - |
| ODS73_RS05775 (ODS73_05770) | 1127094..1127873 | + | 780 | WP_000822769.1 | replication initiator protein A | - |
| ODS73_RS05780 (ODS73_05775) | 1127972..1129330 | + | 1359 | WP_001210972.1 | DNA (cytosine-5-)-methyltransferase | - |
| ODS73_RS05785 (ODS73_05780) | 1129314..1129763 | + | 450 | WP_000645881.1 | hypothetical protein | - |
| ODS73_RS05790 (ODS73_05785) | 1129756..1130136 | + | 381 | WP_000566541.1 | hypothetical protein | - |
| ODS73_RS05795 (ODS73_05790) | 1130149..1130382 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| ODS73_RS05800 (ODS73_05795) | 1130385..1130972 | + | 588 | WP_000821269.1 | type II CAAX endopeptidase family protein | - |
| ODS73_RS05805 (ODS73_05800) | 1131046..1131690 | + | 645 | WP_041974923.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| ODS73_RS05810 (ODS73_05805) | 1131690..1132526 | + | 837 | WP_016398732.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| ODS73_RS05815 (ODS73_05810) | 1132809..1133108 | + | 300 | WP_000869757.1 | hypothetical protein | - |
| ODS73_RS05820 (ODS73_05815) | 1133098..1133586 | + | 489 | WP_000093677.1 | hypothetical protein | - |
| ODS73_RS05825 (ODS73_05820) | 1133586..1135463 | + | 1878 | WP_050243406.1 | type IV secretory system conjugative DNA transfer family protein | - |
| ODS73_RS05830 (ODS73_05825) | 1135484..1135726 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| ODS73_RS05835 (ODS73_05830) | 1135743..1136597 | + | 855 | WP_001054259.1 | conjugal transfer protein TrbL | - |
| ODS73_RS05840 (ODS73_05835) | 1136651..1137010 | + | 360 | WP_050078386.1 | PrgI family protein | - |
| ODS73_RS05845 (ODS73_05840) | 1136961..1139318 | + | 2358 | WP_050217823.1 | AAA family ATPase | - |
| ODS73_RS05850 (ODS73_05845) | 1139330..1142143 | + | 2814 | WP_000653457.1 | phage tail tip lysozyme | - |
| ODS73_RS05855 (ODS73_05850) | 1143160..1144377 | - | 1218 | WP_001291561.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| ODS73_RS05860 (ODS73_05855) | 1144459..1144662 | - | 204 | WP_000814511.1 | excisionase | - |
| ODS73_RS05865 (ODS73_05860) | 1144646..1144897 | + | 252 | WP_001845478.1 | hypothetical protein | - |
| ODS73_RS05870 (ODS73_05865) | 1145123..1145353 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| ODS73_RS05875 (ODS73_05870) | 1145350..1145772 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| ODS73_RS05880 (ODS73_05875) | 1146277..1146630 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| ODS73_RS05885 (ODS73_05880) | 1146690..1146857 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| ODS73_RS05890 (ODS73_05885) | 1146976..1148895 | - | 1920 | WP_000691729.1 | tetracycline resistance ribosomal protection protein Tet(M) | VF |
| ODS73_RS05895 (ODS73_05890) | 1148911..1149027 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| ODS73_RS05900 (ODS73_05895) | 1149272..1150204 | - | 933 | WP_001224318.1 | conjugal transfer protein | - |
| ODS73_RS05905 (ODS73_05900) | 1150201..1151202 | - | 1002 | WP_000769868.1 | hypothetical protein | VF |
| ODS73_RS05910 (ODS73_05905) | 1151199..1153376 | - | 2178 | WP_284060496.1 | YtxH domain-containing protein | - |
| ODS73_RS05915 (ODS73_05910) | 1153379..1155826 | - | 2448 | WP_000331160.1 | ATP-binding protein | - |
| ODS73_RS05920 (ODS73_05915) | 1155810..1156202 | - | 393 | WP_000723888.1 | conjugal transfer protein | - |
| ODS73_RS05925 (ODS73_05920) | 1156291..1156788 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| ODS73_RS05930 (ODS73_05925) | 1156905..1157126 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| ODS73_RS05935 (ODS73_05930) | 1157169..1158374 | - | 1206 | WP_000398284.1 | MobT family relaxase | - |
| ODS73_RS05940 (ODS73_05935) | 1158397..1158549 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| ODS73_RS05945 (ODS73_05940) | 1158552..1159937 | - | 1386 | WP_000813488.1 | FtsK/SpoIIIE domain-containing protein | - |
| ODS73_RS05950 (ODS73_05945) | 1159966..1160352 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| ODS73_RS05955 (ODS73_05950) | 1160368..1160682 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| ODS73_RS05960 (ODS73_05955) | 1161121..1161852 | + | 732 | WP_050215980.1 | ABC transporter ATP-binding protein YxdL | VF |
| ODS73_RS05965 (ODS73_05960) | 1161870..1163186 | + | 1317 | WP_050215981.1 | beta-carotene 15,15'-monooxygenase | - |
| ODS73_RS05970 (ODS73_05965) | 1163617..1164027 | + | 411 | WP_000387509.1 | thrombospondin type 3 repeat-containing protein | - |
| ODS73_RS05975 (ODS73_05970) | 1164075..1170293 | + | 6219 | WP_000454399.1 | DEAD/DEAH box helicase family protein | - |
| ODS73_RS05980 (ODS73_05975) | 1170368..1170652 | + | 285 | WP_000969641.1 | DUF5962 family protein | - |
| ODS73_RS05985 (ODS73_05980) | 1170666..1170962 | + | 297 | WP_000998891.1 | DUF5966 family protein | - |
| ODS73_RS05990 (ODS73_05985) | 1170976..1171173 | - | 198 | WP_004249782.1 | hypothetical protein | - |
| ODS73_RS05995 (ODS73_05990) | 1171333..1171974 | + | 642 | WP_050215983.1 | hypothetical protein | - |
| ODS73_RS06000 (ODS73_05995) | 1171984..1173069 | + | 1086 | WP_050215984.1 | toprim domain-containing protein | - |
| ODS73_RS06005 (ODS73_06000) | 1173120..1173353 | + | 234 | WP_000152419.1 | DUF5965 family protein | - |
| ODS73_RS06010 (ODS73_06005) | 1173350..1173733 | + | 384 | WP_000159212.1 | DUF5945 family protein | - |
| ODS73_RS06015 (ODS73_06010) | 1173771..1174043 | + | 273 | WP_000495438.1 | hypothetical protein | - |
| ODS73_RS06020 (ODS73_06015) | 1174111..1174587 | + | 477 | WP_000579623.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| ODS73_RS06025 (ODS73_06020) | 1174587..1175345 | + | 759 | WP_000405369.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| ODS73_RS06030 (ODS73_06025) | 1175821..1176609 | + | 789 | WP_000214003.1 | hypothetical protein | - |
| ODS73_RS06035 (ODS73_06030) | 1176848..1177096 | + | 249 | WP_001814254.1 | hypothetical protein | - |
| ODS73_RS06040 (ODS73_06035) | 1177267..1177986 | + | 720 | Protein_1194 | Chloramphenicol acetyltransferase | ARG |
| ODS73_RS06045 (ODS73_06040) | 1178782..1179705 | - | 924 | WP_000417606.1 | protein rep | - |
| ODS73_RS06050 (ODS73_06045) | 1179909..1180739 | + | 831 | Protein_1196 | alpha-amylase family glycosyl hydrolase | - |
| ODS73_RS06055 (ODS73_06050) | 1181007..1181462 | + | 456 | WP_025173400.1 | hypothetical protein | - |
| ODS73_RS06060 (ODS73_06055) | 1181738..1182214 | + | 477 | WP_000579612.1 | type II toxin-antitoxin system antitoxin PezA | Antitoxin Detail |
| ODS73_RS06065 (ODS73_06060) | 1182214..1182984 | + | 771 | WP_016399580.1 | type II toxin-antitoxin system toxin PezT | Toxin Detail |
| ODS73_RS06070 (ODS73_06065) | 1183240..1183923 | + | 684 | WP_000492698.1 | LexA family transcriptional regulator | - |
| ODS73_RS06075 (ODS73_06070) | 1183926..1185341 | + | 1416 | WP_000118333.1 | Y-family DNA polymerase | - |
| ODS73_RS06080 (ODS73_06075) | 1185341..1185703 | + | 363 | WP_001082151.1 | hypothetical protein | - |
| ODS73_RS06085 (ODS73_06080) | 1185693..1185983 | + | 291 | WP_001080184.1 | DUF5960 family protein | - |
| ODS73_RS06090 (ODS73_06085) | 1186278..1186634 | + | 357 | WP_000827835.1 | SAG1252 family conjugative relaxosome accessory protein | - |
| ODS73_RS06095 (ODS73_06090) | 1186639..1187004 | + | 366 | WP_000401236.1 | MobC family plasmid mobilization relaxosome protein | - |
| ODS73_RS06100 (ODS73_06095) | 1186991..1188820 | + | 1830 | WP_000237134.1 | SAG1250 family conjugative relaxase | - |
| ODS73_RS06105 (ODS73_06100) | 1188924..1189151 | + | 228 | WP_000919632.1 | helix-turn-helix transcriptional regulator | - |
| ODS73_RS06110 (ODS73_06105) | 1189418..1189651 | + | 234 | WP_001022845.1 | hypothetical protein | - |
| ODS73_RS06115 (ODS73_06110) | 1189736..1191244 | + | 1509 | WP_000291923.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ODS73_RS06120 (ODS73_06115) | 1191326..1192177 | + | 852 | WP_000201286.1 | ribosome biogenesis GTPase YlqF | - |
| ODS73_RS06125 (ODS73_06120) | 1192164..1192943 | + | 780 | WP_000201121.1 | ribonuclease HII | - |
| ODS73_RS06130 (ODS73_06125) | 1192959..1194509 | + | 1551 | WP_000392542.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| ODS73_RS06135 (ODS73_06130) | 1195003..1196073 | + | 1071 | WP_284060497.1 | tyrosine recombinase XerS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|