MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP106995 Location: 1101759..1133639 Organism: Escherichia coli strain SY22B3 Replicon: chromosome
Accession: NZ_CP106995 Location: 1101759..1133639 Organism: Escherichia coli strain SY22B3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OFB03_RS05355 (1097943) | 1097943..1099211 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| OFB03_RS05360 (1099231) | 1099231..1100208 | - | 978 | WP_000993126.1 | glutarate dioxygenase GlaH | - |
| OFB03_RS05365 (1100544) | 1100544..1102796 | - | 2253 | Protein_1048 | alpha-amylase family glycosyl hydrolase | - |
| OFB03_RS05375 (1104182) | 1104182..1105555 | + | 1374 | Protein_1049 | DUF5507 domain-containing protein | - |
| OFB03_RS05380 (1105949) | 1105949..1106128 | + | 180 | WP_087676347.1 | DNA invertase | - |
| OFB03_RS05385 (1106283) | 1106283..1106402 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| OFB03_RS05390 (1106467) | 1106467..1111047 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| OFB03_RS05395 (1111411) | 1111411..1111740 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| OFB03_RS05400 (1111761) | 1111761..1112078 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| OFB03_RS05405 (1112116) | 1112116..1112316 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| OFB03_RS05410 (1112325) | 1112325..1112807 | - | 483 | WP_001407480.1 | RadC family protein | - |
| OFB03_RS05415 (1112816) | 1112816..1113274 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| OFB03_RS05420 (1113377) | 1113377..1113561 | - | 185 | Protein_1058 | DUF905 family protein | - |
| OFB03_RS05425 (1114172) | 1114172..1115875 | - | 1704 | WP_000896263.1 | protein YfjW | - |
| OFB03_RS05430 (1116017) | 1116017..1117026 | + | 1010 | Protein_1060 | arsenic transporter | - |
| OFB03_RS05435 (1117039) | 1117039..1117191 | + | 153 | Protein_1061 | arsenate reductase | - |
| OFB03_RS05440 (1117578) | 1117578..1118045 | - | 468 | WP_000702495.1 | protein YfjT | - |
| OFB03_RS05445 (1118069) | 1118069..1118512 | - | 444 | WP_000824222.1 | lipoprotein YfjS | - |
| OFB03_RS05450 (1118512) | 1118512..1118748 | - | 237 | WP_001144029.1 | protein YpjK | - |
| OFB03_RS05455 (1118789) | 1118789..1119490 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| OFB03_RS05460 (1119707) | 1119707..1120528 | - | 822 | WP_000197391.1 | DUF932 domain-containing protein | - |
| OFB03_RS05465 (1120620) | 1120620..1121483 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| OFB03_RS05470 (1121838) | 1121838..1122209 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| OFB03_RS05475 (1122202) | 1122202..1123275 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| OFB03_RS05480 (1123417) | 1123417..1123680 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| OFB03_RS05485 (1124040) | 1124040..1125656 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| OFB03_RS05490 (1125653) | 1125653..1127842 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| OFB03_RS05495 (1128020) | 1128020..1128646 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| OFB03_RS05500 (1128799) | 1128799..1130208 | - | 1410 | WP_000481742.1 | YfjI family protein | - |
| OFB03_RS05505 (1130337) | 1130337..1130549 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| OFB03_RS05510 (1130593) | 1130593..1131549 | + | 957 | WP_000510827.1 | protein YfjH | - |
| OFB03_RS05515 (1131793) | 1131793..1133034 | - | 1242 | WP_000101722.1 | Prophage integrase IntA ; Integrase | Integrase |
| OFB03_RS05525 (1133815) | 1133815..1134297 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| OFB03_RS05530 (1134468) | 1134468..1134905 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| OFB03_RS05535 (1134895) | 1134895..1135185 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| OFB03_RS05540 (1135247) | 1135247..1135588 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| OFB03_RS05545 (1135737) | 1135737..1137398 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| OFB03_RS05550 (1137484) | 1137484..1138362 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |