NZ_CP1069651..183783

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 183783 bp
Accession: NZ_CP106965        Location: 1..183783         Organism: Klebsiella variicola strain SY1       Replicon: plasmid pQL2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
OCU08_RS26615 1..1011 + 1011 WP_032740675.1 RepB family plasmid replication initiator protein -
OCU08_RS26620 1794..2534 - 741 WP_263528562.1 site-specific integrase -
OCU08_RS26625 2903..3189 - 287 Protein_2 type II toxin-antitoxin system RelE/ParE family toxin -
OCU08_RS26630 3234..3374 - 141 Protein_3 IS3 family transposase ISRso16 Transposase
OCU08_RS26635 3444..4453 + 1010 Protein_4 IS110 family transposase -
OCU08_RS26640 4679..4795 - 117 Protein_5 IS3 family transposase ISYpe1 Transposase
OCU08_RS26645 5331..5936 + 606 WP_074416312.1 hypothetical protein -
OCU08_RS26650 6126..7130 - 1005 WP_131024499.1 hypothetical protein -
OCU08_RS26655 7160..7306 - 147 Protein_8 hypothetical protein -
OCU08_RS26660 7575..7889 - 315 WP_131024500.1 hypothetical protein -
OCU08_RS26665 8385..8615 + 231 WP_007853351.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
OCU08_RS26670 8612..9028 + 417 WP_007374381.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
OCU08_RS26675 9101..10663 + 1563 WP_042936981.1 AAA family ATPase -
OCU08_RS26680 10648..11670 + 1023 WP_007374383.1 hypothetical protein -
OCU08_RS26685 11879..12436 + 558 WP_007374384.1 OsmC family protein -
OCU08_RS26690 12620..13189 + 570 WP_042936984.1 HTH-type transcriptional regulator CymR VF
OCU08_RS26695 13206..13544 + 339 WP_007374386.1 carboxymuconolactone decarboxylase family protein -
OCU08_RS26700 13675..14577 - 903 WP_007374387.1 LysR substrate-binding domain-containing protein -
OCU08_RS26705 14719..16038 + 1320 WP_007374388.1 6-phospho-beta-glucosidase -
OCU08_RS26710 16160..16489 - 330 WP_047665781.1 thioredoxin domain-containing protein -
OCU08_RS26715 16850..17623 + 774 WP_226331825.1 helix-turn-helix transcriptional regulator -
OCU08_RS26720 17607..18170 - 564 WP_042936985.1 YbhB/YbcL family Raf kinase inhibitor-like protein -
OCU08_RS26725 18541..19647 + 1107 WP_263528572.1 alkene reductase -
OCU08_RS26730 19729..20430 + 702 WP_007374393.1 DsbA family oxidoreductase -
OCU08_RS26735 20493..21266 + 774 WP_042936989.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
OCU08_RS26740 21354..22106 + 753 WP_007374395.1 alpha/beta hydrolase -
OCU08_RS26745 22351..22845 - 495 WP_007374396.1 thioredoxin family protein -
OCU08_RS26750 23033..23881 + 849 WP_007374397.1 DMT family transporter -
OCU08_RS26755 24013..25248 + 1236 WP_007374398.1 PatB family C-S lyase -
OCU08_RS26760 25471..25992 - 522 WP_007374399.1 3-hexulose-6-phosphate isomerase VF
OCU08_RS26765 26047..26505 - 459 WP_007374400.1 PTS sugar transporter subunit IIA -
OCU08_RS26770 26505..26798 - 294 WP_007374401.1 PTS sugar transporter subunit IIB -
OCU08_RS26775 26820..28190 - 1371 WP_007374402.1 PTS transporter subunit IIC -
OCU08_RS26780 28194..28730 - 537 WP_004105507.1 RpiB/LacA/LacB family sugar-phosphate isomerase -
OCU08_RS26785 29101..29856 + 756 WP_007374403.1 DeoR/GlpR family DNA-binding transcription regulator -
OCU08_RS26790 30269..31672 + 1404 WP_263528563.1 ISNCY family transposase ISKpn21 Transposase
OCU08_RS26795 31790..32368 + 579 WP_129073735.1 hypothetical protein -
OCU08_RS26805 33760..34131 - 372 WP_263528564.1 hypothetical protein -
OCU08_RS26810 34736..35005 + 270 WP_074188430.1 hypothetical protein -
OCU08_RS26815 35005..35472 + 468 WP_064172194.1 hypothetical protein -
OCU08_RS26820 35515..35886 + 372 WP_064172193.1 hypothetical protein -
OCU08_RS26825 36657..37232 + 576 WP_064172192.1 hypothetical protein -
OCU08_RS26830 37226..37396 - 171 WP_162778893.1 hypothetical protein -
OCU08_RS26835 38213..38653 + 441 Protein_44 IS110 family transposase IS1663 Transposase
OCU08_RS26840 38881..39789 - 909 WP_055323521.1 Lipid A biosynthesis palmitoleoyltransferase VF
OCU08_RS26845 39991..40263 - 273 WP_171842335.1 hypothetical protein -
OCU08_RS26850 40673..40906 + 234 WP_004132711.1 hypothetical protein -
OCU08_RS26855 40926..49508 - 8583 WP_263528565.1 Cyclic beta-(1,2)-glucan synthase NdvB VF
OCU08_RS26860 49664..49828 - 165 WP_213928491.1 YnfU family zinc-binding protein -
OCU08_RS26865 49910..50122 - 213 WP_071822061.1 cold shock-like protein CspF -
OCU08_RS26870 50447..50665 + 219 WP_023279058.1 cold shock domain-containing protein -
OCU08_RS26875 50934..51161 + 228 WP_040107967.1 hypothetical protein -
OCU08_RS26880 51733..52138 + 406 Protein_53 H-NS histone family protein -
OCU08_RS26885 52216..52350 + 135 Protein_54 arsenical resistance protein ArsH -
OCU08_RS26890 52619..53308 + 690 WP_263528566.1 YafY family protein -
OCU08_RS26895 53379..54125 + 747 WP_021462587.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG VF
OCU08_RS26900 54449..54676 + 228 WP_012542191.1 DUF1737 domain-containing protein -
OCU08_RS26905 55122..56885 - 1764 WP_263528567.1 hypothetical protein VF
OCU08_RS26910 58375..58740 - 366 WP_040107964.1 DUF596 domain-containing protein -
OCU08_RS26915 58751..60988 - 2238 Protein_60 DUF637 domain-containing protein -
OCU08_RS26920 60999..61190 - 192 Protein_61 IS110 family transposase IS1618 Transposase
OCU08_RS26925 61559..61864 - 306 WP_049011000.1 DUF596 domain-containing protein -
OCU08_RS26930 61944..62213 - 270 WP_180247977.1 hemagglutinin -
OCU08_RS26935 62231..65239 - 3009 WP_180247976.1 Tn3 family transposase ISEc63 Transposase
OCU08_RS26940 65403..65954 + 552 WP_019706028.1 Tn3 family transposase TnpR_Tn3 Transposase
OCU08_RS26945 65970..66323 + 354 WP_263528568.1 hypothetical protein -
OCU08_RS26950 66375..68066 + 1692 WP_263528569.1 ATP-binding protein -
OCU08_RS26955 68234..68851 + 618 WP_255043698.1 hypothetical protein -
OCU08_RS26960 69157..69711 + 555 WP_223852548.1 hypothetical protein -
OCU08_RS26965 69902..73726 - 3825 WP_263528570.1 hypothetical protein -
OCU08_RS26970 74137..74385 + 249 WP_149063770.1 hypothetical protein -
OCU08_RS26975 74382..74954 + 573 WP_255043692.1 hypothetical protein -
OCU08_RS26980 74985..75479 + 495 WP_255043690.1 DNA-binding protein -
OCU08_RS26985 75529..75732 + 204 WP_012540085.1 HHA domain-containing protein -
OCU08_RS26990 75746..75976 + 231 WP_086071052.1 hypothetical protein -
OCU08_RS26995 76040..76252 + 213 Protein_76 hypothetical protein -
OCU08_RS27000 76256..76510 + 255 WP_263528573.1 hypothetical protein -
OCU08_RS27005 77064..77612 - 549 WP_023320124.1 GNAT family N-acetyltransferase -
OCU08_RS27010 78091..78401 - 311 Protein_79 IS1 family transposase IS1X2 Transposase
OCU08_RS27015 78474..79594 + 1121 WP_255152666.1 IS3 family transposase ISRaq1 Transposase
OCU08_RS27020 79770..80441 - 672 WP_023320121.1 SOS response-associated peptidase -
OCU08_RS27025 80570..81472 - 903 WP_023320120.1 ATP-grasp fold amidoligase family protein -
OCU08_RS27030 81654..82430 - 777 WP_004186919.1 MipA/OmpV family protein -
OCU08_RS27035 82535..83221 + 687 WP_023320119.1 Response regulator ArlR VF
OCU08_RS27040 83218..84405 + 1188 WP_023320118.1 ATP-binding protein -
OCU08_RS27045 84669..85559 - 891 WP_032431325.1 hypothetical protein VF
OCU08_RS27050 85588..87006 - 1419 WP_004186909.1 Outer membrane protein OprM VF
OCU08_RS27055 87327..87401 + 75 Protein_88 Sec-independent protein translocase TatB -
OCU08_RS27060 88679..89536 - 858 WP_258219542.1 incFII family plasmid replication initiator RepA -
OCU08_RS27065 89555..89729 - 175 Protein_90 protein CopA/IncA -
OCU08_RS27070 89829..90098 - 270 WP_074194493.1 replication regulatory protein RepA -
OCU08_RS27075 90217..90768 - 552 WP_041165539.1 Phospholipase D VF
OCU08_RS27080 90873..91181 - 309 WP_012539984.1 hypothetical protein -
OCU08_RS27085 91178..91828 - 651 WP_128206231.1 DUF2726 domain-containing protein -
OCU08_RS27090 91884..92528 - 645 WP_263528571.1 hypothetical protein -
OCU08_RS27095 92996..93343 - 348 WP_040088254.1 DUF6404 family protein -
OCU08_RS27100 93363..93959 - 597 WP_128206233.1 fertility inhibition protein FinO -
OCU08_RS27105 94116..94841 - 726 WP_128206234.1 type-F conjugative transfer system pilin acetylase TraX -
OCU08_RS27110 94921..100179 - 5259 WP_263528559.1 Multifunctional conjugation protein TraI Relaxase
OCU08_RS27115 100179..102488 - 2310 WP_247181441.1 type IV conjugative transfer system coupling protein TraD -
OCU08_RS27120 102850..103581 - 732 WP_004152629.1 conjugal transfer complement resistance protein TraT -
OCU08_RS27125 103771..104301 - 531 WP_128206265.1 conjugal transfer protein TraS -
OCU08_RS27130 104304..107153 - 2850 WP_263528560.1 conjugal transfer mating-pair stabilization protein TraG -
OCU08_RS27135 107153..108532 - 1380 WP_247181439.1 conjugal transfer pilus assembly protein TraH -
OCU08_RS27140 108510..108953 - 444 WP_247181438.1 F-type conjugal transfer protein TrbF -
OCU08_RS27145 108999..109556 - 558 WP_114446709.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
OCU08_RS27150 109528..109767 - 240 WP_009309875.1 type-F conjugative transfer system pilin chaperone TraQ -
OCU08_RS27155 109778..110530 - 753 WP_020316647.1 type-F conjugative transfer system pilin assembly protein TraF -
OCU08_RS27160 110551..110877 - 327 WP_020323521.1 hypothetical protein -
OCU08_RS27165 110888..111115 - 228 WP_049119078.1 conjugal transfer protein TrbE -
OCU08_RS27170 111105..111386 - 282 WP_049119079.1 hypothetical protein -
OCU08_RS27175 111419..113374 - 1956 WP_258219546.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
OCU08_RS27180 113433..114071 - 639 WP_047667531.1 type-F conjugative transfer system pilin assembly protein TrbC -
OCU08_RS27185 114084..115073 - 990 WP_046622837.1 conjugal transfer pilus assembly protein TraU -
OCU08_RS27190 115070..115459 - 390 WP_032445235.1 hypothetical protein -
OCU08_RS27195 115501..116127 - 627 WP_004152507.1 type-F conjugative transfer system protein TraW -
OCU08_RS27200 116127..116516 - 390 WP_004167468.1 type-F conjugative transfer system protein TrbI -
OCU08_RS27205 116516..119155 - 2640 WP_122463084.1 type IV secretion system protein TraC -
OCU08_RS27210 119227..119625 - 399 WP_162994809.1 hypothetical protein -
OCU08_RS27215 119633..119947 - 315 WP_228258590.1 hypothetical protein -
OCU08_RS27220 120051..120341 - 291 WP_128206242.1 hypothetical protein -
OCU08_RS27225 120338..120742 - 405 WP_128206243.1 hypothetical protein -
OCU08_RS27230 120809..121126 - 318 WP_023320103.1 hypothetical protein -
OCU08_RS27235 121127..121345 - 219 WP_004171484.1 hypothetical protein -
OCU08_RS27240 121369..121659 - 291 WP_048993668.1 hypothetical protein -
OCU08_RS27245 121664..122074 - 411 WP_128206244.1 hypothetical protein -
OCU08_RS27250 122206..122790 - 585 WP_114502744.1 type IV conjugative transfer system lipoprotein TraV -
OCU08_RS27255 122809..122994 - 186 WP_038990989.1 hypothetical protein -
OCU08_RS27260 122991..124415 - 1425 WP_258219550.1 F-type conjugal transfer pilus assembly protein TraB -
OCU08_RS27265 124415..125155 - 741 WP_128206246.1 type-F conjugative transfer system secretin TraK -
OCU08_RS27270 125142..125708 - 567 WP_020316627.1 type IV conjugative transfer system protein TraE -
OCU08_RS27275 125728..126033 - 306 WP_004178059.1 type IV conjugative transfer system protein TraL -
OCU08_RS27280 126047..126415 - 369 WP_020316649.1 type IV conjugative transfer system pilin TraA -
OCU08_RS27285 126484..126684 - 201 WP_048289787.1 TraY domain-containing protein -
OCU08_RS27290 126770..127471 - 702 WP_258219551.1 hypothetical protein -
OCU08_RS27295 127709..128101 - 393 WP_020805752.1 conjugal transfer relaxosome DNA-binding protein TraM -
OCU08_RS27300 128605..129012 + 408 WP_226331063.1 hypothetical protein VF
OCU08_RS27305 129050..129580 - 531 WP_023292160.1 antirestriction protein -
OCU08_RS27310 130205..131038 - 834 WP_087757905.1 N-6 DNA methylase -
OCU08_RS27315 131085..131315 - 231 WP_004197732.1 hypothetical protein -
OCU08_RS27320 131403..131750 - 348 WP_023292162.1 hypothetical protein -
OCU08_RS27325 131817..132197 - 381 WP_131034469.1 hypothetical protein -
OCU08_RS27330 132697..132993 - 297 WP_228724929.1 hypothetical protein -
OCU08_RS27335 133022..133438 - 417 WP_023292164.1 helix-turn-helix domain-containing protein -
OCU08_RS27340 133435..133635 - 201 Protein_145 type II toxin-antitoxin system HigB family toxin -
OCU08_RS27345 133819..135018 + 1200 WP_114435892.1 site-specific integrase -
OCU08_RS27350 135015..135960 + 946 Protein_147 PDDEXK nuclease domain-containing protein -
OCU08_RS27355 135952..136536 + 585 Protein_148 DUF945 domain-containing protein -
OCU08_RS27360 136616..136909 - 294 WP_114435891.1 helix-turn-helix transcriptional regulator -
OCU08_RS27365 137196..137531 + 336 WP_114435890.1 DUF2958 domain-containing protein -
OCU08_RS27370 137878..138546 + 669 WP_228258592.1 DUF2285 domain-containing protein -
OCU08_RS27375 138478..138717 - 240 Protein_152 oxidoreductase -
OCU08_RS27380 139061..140047 - 987 WP_207304652.1 polysaccharide deacetylase family protein -
OCU08_RS27385 140001..140807 - 807 WP_114268491.1 class D beta-lactamase OXA-926 -
OCU08_RS27390 141046..141429 - 384 WP_114435888.1 hypothetical protein -
OCU08_RS27395 141504..141929 + 426 WP_032720670.1 helix-turn-helix domain-containing protein -
OCU08_RS27400 141926..142804 + 879 WP_114268494.1 alpha/beta hydrolase -
OCU08_RS27405 142895..143839 + 945 WP_128206249.1 Hca operon transcriptional activator HcaR VF
OCU08_RS27410 143943..144899 + 957 Protein_159 IS30 family transposase IS1112a Transposase
OCU08_RS27415 144900..145157 + 258 WP_128206250.1 EexN family lipoprotein -
OCU08_RS27420 145480..145737 + 258 Protein_161 VirB8/TrbF family protein -
OCU08_RS27425 145734..146735 + 1002 WP_131034468.1 P-type conjugative transfer protein TrbG -
OCU08_RS27430 146738..148012 + 1275 WP_258219552.1 hypothetical protein VF
OCU08_RS27435 148009..148260 + 252 WP_128206252.1 DUF2274 domain-containing protein -
OCU08_RS27440 148563..148658 - 96 Protein_165 cytoplasmic protein -
OCU08_RS27445 148764..148988 - 225 WP_128206253.1 hypothetical protein -
OCU08_RS27450 148999..149211 - 213 WP_128206254.1 hypothetical protein -
OCU08_RS27455 149272..149601 - 330 WP_164875724.1 hypothetical protein -
OCU08_RS27460 149613..149825 - 213 WP_047722603.1 hypothetical protein -
OCU08_RS27465 149863..150060 - 198 Protein_170 single-stranded DNA-binding protein -
OCU08_RS27470 150692..151009 - 318 WP_032747192.1 hypothetical protein -
OCU08_RS27475 151024..151374 - 351 WP_042938321.1 hypothetical protein -
OCU08_RS27480 151371..151643 - 273 WP_114268495.1 hypothetical protein -
OCU08_RS27485 151949..153156 - 1208 Protein_174 IS256 family transposase ISEc39 Transposase
OCU08_RS27490 153342..153461 - 120 WP_223230170.1 Hok/Gef family protein -
OCU08_RS27495 153409..153522 - 114 Protein_176 FlmC family protein -
OCU08_RS27500 153843..154328 - 486 WP_013087172.1 GNAT family N-acetyltransferase Toxin Detail
OCU08_RS27505 154316..154582 - 267 WP_012540086.1 DUF1778 domain-containing protein Antitoxin Detail
OCU08_RS27510 154882..155205 + 324 WP_012540250.1 metalloregulator ArsR/SmtB family transcription factor -
OCU08_RS27515 155207..155920 + 714 WP_012540184.1 arsenical resistance protein ArsH -
OCU08_RS27520 155929..156474 + 546 WP_012540227.1 sigma-70 family RNA polymerase sigma factor -
OCU08_RS27525 156550..156912 + 363 WP_049010935.1 arsenic metallochaperone ArsD family protein -
OCU08_RS27530 156939..158690 + 1752 WP_162866166.1 Arsenical pump-driving ATPase VF
OCU08_RS27535 158815..159351 + 537 WP_012540238.1 Phosphinothricin N-acetyltransferase VF
OCU08_RS27540 159386..159811 - 426 WP_263528561.1 glutaredoxin-dependent arsenate reductase -
OCU08_RS27545 159824..161113 - 1290 WP_049010929.1 arsenite efflux transporter membrane subunit ArsB -
OCU08_RS27550 161161..162912 - 1752 WP_131024494.1 arsenite efflux transporter ATPase subunit ArsA -
OCU08_RS27555 162930..163292 - 363 WP_012540111.1 arsenite efflux transporter metallochaperone ArsD -
OCU08_RS27560 163340..163690 - 351 WP_012540252.1 As(III)-sensing metalloregulatory transcriptional repressor ArsR -
OCU08_RS27565 163908..165277 - 1370 Protein_190 IS3 family transposase ISKpn8 Transposase
OCU08_RS27570 165466..165792 - 327 WP_038992719.1 hypothetical protein -
OCU08_RS27575 165789..166517 - 729 WP_131024495.1 plasmid SOS inhibition protein A -
OCU08_RS27580 166514..166945 - 432 WP_038992715.1 conjugation system SOS inhibitor PsiB -
OCU08_RS27585 166990..168990 - 2001 WP_049010916.1 ParB/RepB/Spo0J family partition protein -
OCU08_RS27590 169059..169307 - 249 WP_049010914.1 DUF905 domain-containing protein -
OCU08_RS27595 169356..169898 - 543 WP_064402442.1 single-stranded DNA-binding protein -
OCU08_RS27600 169929..170132 - 204 WP_071592596.1 hypothetical protein -
OCU08_RS27605 170618..170938 - 321 WP_049010910.1 hypothetical protein -
OCU08_RS27610 170973..171227 - 255 WP_165454128.1 DNA polymerase III subunit theta -
OCU08_RS27615 171428..171619 - 192 WP_049010907.1 hypothetical protein -
OCU08_RS27620 171662..172168 - 507 WP_046622857.1 antirestriction protein ArdA -
OCU08_RS27625 172213..172641 - 429 WP_047722632.1 antirestriction protein -
OCU08_RS27630 173090..173254 - 165 Protein_203 hypothetical protein -
OCU08_RS27635 173270..174841 - 1572 WP_049010905.1 sensor domain-containing diguanylate cyclase -
OCU08_RS27640 175252..175548 + 297 WP_042937695.1 hypothetical protein -
OCU08_RS27645 175939..176169 - 231 WP_032740680.1 hypothetical protein -
OCU08_RS27650 176628..177530 + 903 WP_242925779.1 DHH family phosphoesterase -
OCU08_RS27655 177533..177958 + 426 WP_032740679.1 universal stress protein -
OCU08_RS27660 177975..179264 + 1290 WP_032740678.1 phosphopyruvate hydratase -
OCU08_RS27665 179361..179735 + 375 WP_100245397.1 fluoride efflux transporter CrcB -
OCU08_RS27670 180911..181876 - 966 WP_032740676.1 ParB/RepB/Spo0J family plasmid partition protein -
OCU08_RS27675 181876..183042 - 1167 WP_000523815.1 hypothetical protein VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance