MGE detailed information
MGE type: Genomic_island MGE length: 59434 bp
Accession: NZ_CP106929 Location: 4072188..4131621 Organism: Escherichia coli strain MFDS1001074 Replicon: chromosome
Accession: NZ_CP106929 Location: 4072188..4131621 Organism: Escherichia coli strain MFDS1001074 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OEG89_RS20205 (4067339) | 4067339..4068253 | - | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| OEG89_RS20210 (4068494) | 4068494..4069294 | + | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| OEG89_RS20215 (4069325) | 4069325..4069921 | + | 597 | Protein_3934 | methyltransferase domain-containing protein | - |
| OEG89_RS20220 (4069969) | 4069969..4071327 | - | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| OEG89_RS20225 (4071399) | 4071399..4072154 | - | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| OEG89_RS20230 (4072188) | 4072188..4072910 | + | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| OEG89_RS20235 (4072907) | 4072907..4073374 | - | 468 | WP_000917883.1 | ribonuclease HI | - |
| OEG89_RS20240 (4073439) | 4073439..4074170 | + | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| OEG89_RS20250 (4074707) | 4074707..4075492 | + | 786 | WP_001086141.1 | lipoprotein | - |
| OEG89_RS20255 (4075629) | 4075629..4076108 | - | 480 | WP_001236645.1 | protein YkfM | - |
| OEG89_RS20260 (4076118) | 4076118..4077033 | - | 916 | Protein_3942 | hypothetical protein | - |
| OEG89_RS20265 (4077077) | 4077077..4077559 | - | 483 | WP_001284199.1 | Major exported protein | VF |
| OEG89_RS20270 (4077486) | 4077486..4078935 | - | 1450 | Protein_3944 | hypothetical protein | VF |
| OEG89_RS20275 (4078946) | 4078946..4080247 | - | 1302 | Protein_3945 | hypothetical protein | VF |
| OEG89_RS20280 (4080262) | 4080262..4084350 | + | 4089 | Protein_3946 | Protein RhsD | VF |
| OEG89_RS20285 (4084328) | 4084328..4084558 | + | 231 | WP_072015453.1 | hypothetical protein | - |
| OEG89_RS20290 (4084542) | 4084542..4084718 | + | 177 | WP_000008098.1 | hypothetical protein | - |
| OEG89_RS20295 (4085149) | 4085149..4085379 | + | 231 | Protein_3949 | ISAs1 family transposase ISEc1 | Transposase |
| OEG89_RS20300 (4085432) | 4085432..4086109 | + | 678 | WP_001373818.1 | IS66 family transposase ISCro1 | Transposase |
| OEG89_RS20305 (4086109) | 4086109..4086456 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| OEG89_RS20310 (4086476) | 4086476..4088047 | + | 1572 | WP_069720765.1 | IS66 family transposase ISCro1 | Transposase |
| OEG89_RS20315 (4088078) | 4088078..4088992 | + | 915 | Protein_3953 | ISAs1 family transposase ISEc1 | Transposase |
| OEG89_RS20320 (4089033) | 4089033..4089803 | - | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| OEG89_RS20325 (4089984) | 4089984..4090430 | + | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| OEG89_RS20330 (4090473) | 4090473..4092917 | - | 2445 | WP_263308147.1 | Acyl-coenzyme A dehydrogenase | VF |
| OEG89_RS20335 (4093157) | 4093157..4093735 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| OEG89_RS20340 (4093941) | 4093941..4094708 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| OEG89_RS20345 (4094679) | 4094679..4095419 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| OEG89_RS20350 (4095575) | 4095575..4095853 | - | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| OEG89_RS20355 (4095856) | 4095856..4096116 | - | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| OEG89_RS20360 (4096326) | 4096326..4097075 | + | 750 | WP_000056849.1 | hypothetical protein | VF |
| OEG89_RS20365 (4097251) | 4097251..4097748 | + | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| OEG89_RS20370 (4097972) | 4097972..4099684 | - | 1713 | Protein_3964 | Flagellar biosynthesis protein FlhA | VF |
| OEG89_RS20375 (4099656) | 4099656..4100441 | + | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| OEG89_RS20380 (4100512) | 4100512..4101567 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| OEG89_RS20385 (4101619) | 4101619..4101912 | + | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| OEG89_RS20390 (4101915) | 4101915..4102313 | + | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| OEG89_RS20395 (4102323) | 4102323..4102775 | + | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| OEG89_RS20400 (4103093) | 4103093..4103299 | + | 207 | Protein_3970 | RtcB family protein | - |
| OEG89_RS20405 (4103295) | 4103295..4103816 | + | 522 | Protein_3971 | peptide chain release factor H | - |
| OEG89_RS20410 (4103873) | 4103873..4105330 | - | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| OEG89_RS20415 (4105591) | 4105591..4106049 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| - (4106645) | 4106645..4106725 | + | 81 | NuclAT_12 | - | - |
| - (4106645) | 4106645..4106725 | + | 81 | NuclAT_12 | - | - |
| - (4106645) | 4106645..4106725 | + | 81 | NuclAT_12 | - | - |
| - (4106645) | 4106645..4106725 | + | 81 | NuclAT_12 | - | - |
| OEG89_RS20420 (4106141) | 4106141..4107385 | + | 1245 | WP_000189532.1 | esterase FrsA | - |
| OEG89_RS20425 (4107443) | 4107443..4107844 | + | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| OEG89_RS20430 (4107883) | 4107883..4108938 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| OEG89_RS20435 (4109226) | 4109226..4110329 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| OEG89_RS20440 (4110341) | 4110341..4111594 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| OEG89_RS20450 (4112394) | 4112394..4112546 | + | 153 | WP_000788776.1 | hypothetical protein | - |
| OEG89_RS20455 (4112613) | 4112613..4112771 | - | 159 | WP_000550449.1 | hypothetical protein | - |
| OEG89_RS20460 (4113166) | 4113166..4113717 | + | 552 | WP_001323651.1 | hypothetical protein | - |
| OEG89_RS20465 (4114114) | 4114114..4114407 | + | 294 | WP_263308148.1 | hypothetical protein | - |
| OEG89_RS20470 (4115802) | 4115802..4115984 | + | 183 | WP_000870975.1 | hypothetical protein | - |
| OEG89_RS20475 (4116006) | 4116006..4116176 | + | 171 | WP_000005468.1 | hypothetical protein | - |
| OEG89_RS20480 (4116230) | 4116230..4116799 | + | 570 | WP_000606591.1 | hypothetical protein | - |
| OEG89_RS20485 (4116809) | 4116809..4116967 | + | 159 | WP_001374238.1 | hypothetical protein | - |
| OEG89_RS20490 (4117174) | 4117174..4117557 | + | 384 | WP_000532775.1 | hypothetical protein | - |
| OEG89_RS20495 (4117615) | 4117615..4117818 | + | 204 | WP_000580785.1 | hypothetical protein | - |
| OEG89_RS20500 (4117818) | 4117818..4118126 | + | 309 | WP_000390658.1 | hypothetical protein | - |
| OEG89_RS20505 (4119111) | 4119111..4119308 | + | 198 | WP_000807036.1 | hypothetical protein | - |
| OEG89_RS20510 (4119313) | 4119313..4119696 | + | 384 | WP_000013186.1 | hypothetical protein | - |
| OEG89_RS20515 (4119711) | 4119711..4120742 | + | 1032 | WP_000999103.1 | hypothetical protein | - |
| OEG89_RS20520 (4120894) | 4120894..4121091 | + | 198 | WP_001374248.1 | hypothetical protein | - |
| OEG89_RS20525 (4121126) | 4121126..4123027 | + | 1902 | WP_000890105.1 | hypothetical protein | - |
| OEG89_RS20530 (4123101) | 4123101..4123757 | + | 657 | WP_000974935.1 | hypothetical protein | - |
| OEG89_RS20535 (4123832) | 4123832..4125109 | - | 1278 | WP_001269639.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| OEG89_RS20540 (4125397) | 4125397..4125735 | - | 339 | Protein_3997 | LysR substrate-binding domain-containing protein | - |
| OEG89_RS20545 (4125786) | 4125786..4126742 | - | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| OEG89_RS20550 (4126752) | 4126752..4128950 | - | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| OEG89_RS20555 (4128947) | 4128947..4129903 | - | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| OEG89_RS20560 (4129900) | 4129900..4130589 | - | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| OEG89_RS20565 (4131007) | 4131007..4131621 | + | 615 | WP_001019920.1 | YagU family protein | - |
| OEG89_RS20570 (4131869) | 4131869..4132198 | - | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| OEG89_RS20575 (4132511) | 4132511..4133221 | - | 711 | WP_001360105.1 | fimbrial chaperone EcpE | - |
| OEG89_RS20580 (4133190) | 4133190..4134833 | - | 1644 | Protein_4005 | fimbrial adhesin EcpD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|