MGE detailed information
MGE type: Prophage MGE length: 83698 bp
Accession: NZ_CP106834 Location: 1872565..1956262 Organism: Staphylococcus epidermidis strain AH6072 Replicon: chromosome
Accession: NZ_CP106834 Location: 1872565..1956262 Organism: Staphylococcus epidermidis strain AH6072 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N8145_RS08750 (N8145_08750) | 1867763..1867909 | - | 147 | WP_001831913.1 | teichoic acid D-Ala incorporation-associated protein DltX | - |
| N8145_RS08755 (N8145_08755) | 1868315..1869286 | - | 972 | WP_002470476.1 | D-glycerate dehydrogenase | - |
| N8145_RS08760 (N8145_08760) | 1869328..1870107 | - | 780 | WP_002470503.1 | TIGR01457 family HAD-type hydrolase | - |
| N8145_RS08765 (N8145_08765) | 1870107..1870541 | - | 435 | WP_001831932.1 | DUF86 domain-containing protein | - |
| N8145_RS08770 (N8145_08770) | 1870660..1870926 | + | 267 | WP_001831957.1 | DUF3055 domain-containing protein | - |
| N8145_RS08775 (N8145_08775) | 1870986..1871375 | - | 390 | WP_001831895.1 | DUF1027 domain-containing protein | - |
| N8145_RS08780 (N8145_08780) | 1871562..1872476 | - | 915 | WP_001831979.1 | lipoyl synthase | - |
| N8145_RS08785 (N8145_08785) | 1872565..1873884 | - | 1320 | WP_002470490.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| N8145_RS08790 (N8145_08790) | 1873970..1874797 | - | 828 | WP_029376429.1 | sulfite exporter TauE/SafE family protein | - |
| N8145_RS08795 (N8145_08795) | 1874810..1875658 | - | 849 | WP_001831962.1 | DUF72 domain-containing protein | - |
| N8145_RS08800 (N8145_08800) | 1876025..1877050 | - | 1026 | WP_002470470.1 | CNNM domain-containing protein | - |
| N8145_RS08805 (N8145_08805) | 1877531..1877908 | - | 378 | WP_002499029.1 | hypothetical protein | - |
| N8145_RS08810 (N8145_08810) | 1877899..1878045 | - | 147 | WP_001831994.1 | hypothetical protein | - |
| N8145_RS08815 (N8145_08815) | 1878708..1878887 | - | 180 | WP_002468147.1 | hypothetical protein | - |
| N8145_RS08820 (N8145_08820) | 1879887..1880699 | - | 813 | WP_233944913.1 | SH3 domain-containing protein | - |
| N8145_RS08825 (N8145_08825) | 1880949..1881350 | - | 402 | WP_233944797.1 | CHAP domain-containing protein | - |
| N8145_RS08830 (N8145_08830) | 1881325..1881735 | - | 411 | WP_145397314.1 | phage holin | - |
| N8145_RS08835 (N8145_08835) | 1881798..1882196 | - | 399 | WP_145397316.1 | YxeA family protein | - |
| N8145_RS08840 (N8145_08840) | 1882354..1882761 | - | 408 | WP_145397318.1 | hypothetical protein | - |
| N8145_RS08845 (N8145_08845) | 1882748..1883173 | - | 426 | WP_002497615.1 | hypothetical protein | - |
| N8145_RS08850 (N8145_08850) | 1883170..1883793 | - | 624 | WP_063280535.1 | poly-gamma-glutamate hydrolase family protein | - |
| N8145_RS08855 (N8145_08855) | 1883798..1885012 | - | 1215 | WP_145397321.1 | BppU family phage baseplate upper protein | - |
| N8145_RS08860 (N8145_08860) | 1885012..1886874 | - | 1863 | WP_145397323.1 | M14 family metallopeptidase | - |
| N8145_RS08865 (N8145_08865) | 1886890..1887063 | - | 174 | WP_002453517.1 | hypothetical protein | - |
| N8145_RS08870 (N8145_08870) | 1887056..1888615 | - | 1560 | WP_203085229.1 | prophage endopeptidase tail family protein | - |
| N8145_RS08875 (N8145_08875) | 1888625..1889458 | - | 834 | WP_145397328.1 | phage tail family protein | - |
| N8145_RS08880 (N8145_08880) | 1889460..1893938 | - | 4479 | WP_263266462.1 | tape measure protein | - |
| N8145_RS08885 (N8145_08885) | 1893967..1894119 | - | 153 | WP_186298300.1 | hypothetical protein | - |
| N8145_RS08890 (N8145_08890) | 1894152..1894514 | - | 363 | WP_145397332.1 | hypothetical protein | - |
| N8145_RS08895 (N8145_08895) | 1894578..1894763 | - | 186 | WP_002484762.1 | hypothetical protein | - |
| N8145_RS08900 (N8145_08900) | 1894782..1895414 | - | 633 | WP_145397334.1 | phage tail protein | - |
| N8145_RS08905 (N8145_08905) | 1895427..1895831 | - | 405 | WP_002468129.1 | hypothetical protein | - |
| N8145_RS08910 (N8145_08910) | 1895836..1896240 | - | 405 | WP_002468130.1 | hypothetical protein | - |
| N8145_RS08915 (N8145_08915) | 1896237..1896566 | - | 330 | WP_002468167.1 | hypothetical protein | - |
| N8145_RS08920 (N8145_08920) | 1896556..1896897 | - | 342 | WP_145397336.1 | head-tail connector protein | - |
| N8145_RS08925 (N8145_08925) | 1896916..1898268 | - | 1353 | WP_145397338.1 | phage major capsid protein | - |
| N8145_RS08930 (N8145_08930) | 1898308..1898865 | - | 558 | WP_145397340.1 | HK97 family phage prohead protease | - |
| N8145_RS08935 (N8145_08935) | 1898855..1900087 | - | 1233 | WP_263266473.1 | phage portal protein | - |
| N8145_RS08940 (N8145_08940) | 1900090..1900284 | - | 195 | WP_002500102.1 | hypothetical protein | - |
| N8145_RS08945 (N8145_08945) | 1900296..1902047 | - | 1752 | WP_002468181.1 | terminase large subunit | - |
| N8145_RS08950 (N8145_08950) | 1902040..1902510 | - | 471 | WP_002468174.1 | phage terminase small subunit P27 family | - |
| N8145_RS08955 (N8145_08955) | 1902653..1903003 | - | 351 | WP_002498305.1 | HNH endonuclease | - |
| N8145_RS08960 (N8145_08960) | 1903594..1904040 | - | 447 | WP_002468152.1 | transcriptional regulator | - |
| N8145_RS08965 (N8145_08965) | 1904249..1904389 | - | 141 | WP_002468120.1 | hypothetical protein | - |
| N8145_RS08970 (N8145_08970) | 1904494..1904796 | + | 303 | WP_002498306.1 | hypothetical protein | - |
| N8145_RS08975 (N8145_08975) | 1904916..1905338 | - | 423 | WP_002468111.1 | dUTP diphosphatase | - |
| N8145_RS08980 (N8145_08980) | 1905395..1905712 | + | 318 | WP_224479694.1 | hypothetical protein | - |
| N8145_RS08985 (N8145_08985) | 1905730..1905930 | - | 201 | WP_002468135.1 | hypothetical protein | - |
| N8145_RS08990 (N8145_08990) | 1905920..1906090 | - | 171 | WP_233944914.1 | DUF3310 domain-containing protein | - |
| N8145_RS08995 (N8145_08995) | 1906118..1906372 | - | 255 | Protein_1737 | hypothetical protein | - |
| N8145_RS09000 (N8145_09000) | 1906369..1906728 | - | 360 | WP_002468115.1 | SA1788 family PVL leukocidin-associated protein | - |
| N8145_RS09005 (N8145_09005) | 1906729..1906926 | - | 198 | WP_002468127.1 | hypothetical protein | - |
| N8145_RS09010 (N8145_09010) | 1906927..1907334 | - | 408 | WP_002468165.1 | RusA family crossover junction endodeoxyribonuclease | - |
| N8145_RS09015 (N8145_09015) | 1907343..1907555 | - | 213 | WP_233944804.1 | hypothetical protein | - |
| N8145_RS09020 (N8145_09020) | 1907588..1907749 | - | 162 | WP_002468163.1 | hypothetical protein | - |
| N8145_RS09025 (N8145_09025) | 1907743..1908504 | - | 762 | WP_224479695.1 | IS21 family transposase ISRme9 | Transposase |
| N8145_RS09030 (N8145_09030) | 1908526..1909299 | - | 774 | WP_002498312.1 | conserved phage C-terminal domain-containing protein | - |
| N8145_RS09035 (N8145_09035) | 1909343..1909825 | + | 483 | WP_145397346.1 | hypothetical protein | - |
| N8145_RS09040 (N8145_09040) | 1909841..1910512 | - | 672 | WP_002498314.1 | putative HNHc nuclease | - |
| N8145_RS09045 (N8145_09045) | 1910524..1911078 | - | 555 | WP_049374172.1 | single-stranded DNA-binding protein | - |
| N8145_RS09050 (N8145_09050) | 1911107..1911883 | - | 777 | WP_002468156.1 | ATP-binding protein | - |
| N8145_RS09055 (N8145_09055) | 1911884..1912369 | - | 486 | WP_002498316.1 | siphovirus Gp157 family protein | - |
| N8145_RS09060 (N8145_09060) | 1912353..1912616 | - | 264 | WP_002468154.1 | hypothetical protein | - |
| N8145_RS09065 (N8145_09065) | 1912682..1912864 | - | 183 | WP_002498317.1 | hypothetical protein | - |
| N8145_RS09070 (N8145_09070) | 1912861..1913076 | - | 216 | WP_002468180.1 | hypothetical protein | - |
| N8145_RS09075 (N8145_09075) | 1913184..1913387 | + | 204 | WP_002468183.1 | hypothetical protein | - |
| N8145_RS09080 (N8145_09080) | 1913495..1913983 | - | 489 | WP_002498318.1 | ORF6C domain-containing protein | - |
| N8145_RS09085 (N8145_09085) | 1914042..1914422 | + | 381 | WP_002498319.1 | DUF2513 domain-containing protein | - |
| N8145_RS09090 (N8145_09090) | 1914414..1914590 | - | 177 | WP_002498320.1 | hypothetical protein | - |
| N8145_RS09095 (N8145_09095) | 1914601..1915518 | - | 918 | WP_080352717.1 | hypothetical protein | - |
| N8145_RS09100 (N8145_09100) | 1915533..1915769 | - | 237 | WP_002498322.1 | helix-turn-helix transcriptional regulator | - |
| N8145_RS09105 (N8145_09105) | 1915922..1916236 | + | 315 | WP_002498323.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| N8145_RS09110 (N8145_09110) | 1916249..1916710 | + | 462 | WP_002484735.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| N8145_RS09115 (N8145_09115) | 1916879..1917046 | + | 168 | WP_002498324.1 | hypothetical protein | - |
| N8145_RS09120 (N8145_09120) | 1917068..1918207 | + | 1140 | WP_002498325.1 | CapA family protein | - |
| N8145_RS09125 (N8145_09125) | 1918423..1919472 | + | 1050 | WP_002498326.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N8145_RS09130 (N8145_09130) | 1919540..1920937 | - | 1398 | WP_002498327.1 | Fe-S cluster assembly protein SufB | - |
| N8145_RS09135 (N8145_09135) | 1921143..1921607 | - | 465 | WP_001831954.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| N8145_RS09140 (N8145_09140) | 1921597..1922838 | - | 1242 | WP_002468879.1 | cysteine desulfurase | - |
| N8145_RS09145 (N8145_09145) | 1922906..1924213 | - | 1308 | WP_002470498.1 | Fe-S cluster assembly protein SufD | - |
| N8145_RS09150 (N8145_09150) | 1924308..1925069 | - | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
| N8145_RS09155 (N8145_09155) | 1925391..1926251 | + | 861 | WP_001831939.1 | DUF368 domain-containing protein | - |
| N8145_RS09160 (N8145_09160) | 1926317..1926508 | - | 192 | WP_001831967.1 | CsbD family protein | - |
| N8145_RS09165 (N8145_09165) | 1926683..1926841 | + | 159 | WP_032606004.1 | hypothetical protein | - |
| N8145_RS09170 (N8145_09170) | 1927111..1927923 | - | 813 | WP_002438990.1 | Methionine-binding lipoprotein MetQ | VF |
| N8145_RS09175 (N8145_09175) | 1927944..1928639 | - | 696 | WP_001831910.1 | methionine ABC transporter permease | - |
| N8145_RS09180 (N8145_09180) | 1928632..1929657 | - | 1026 | WP_001831992.1 | Methionine import ATP-binding protein MetN 2 | VF |
| N8145_RS09185 (N8145_09185) | 1929910..1930206 | - | 297 | WP_001831936.1 | thioredoxin family protein | - |
| N8145_RS09190 (N8145_09190) | 1930199..1930585 | - | 387 | WP_001831968.1 | toprim domain-containing protein | - |
| N8145_RS09195 (N8145_09195) | 1930782..1931162 | - | 381 | WP_002438979.1 | glycine cleavage system protein GcvH | - |
| N8145_RS09200 (N8145_09200) | 1931336..1931689 | - | 354 | WP_001831965.1 | arsenate reductase family protein | - |
| N8145_RS09205 (N8145_09205) | 1931832..1932155 | + | 324 | WP_002468888.1 | thioredoxin family protein | - |
| N8145_RS09210 (N8145_09210) | 1932331..1932873 | - | 543 | WP_001831981.1 | nitroreductase | - |
| N8145_RS09215 (N8145_09215) | 1932954..1933670 | - | 717 | WP_001831974.1 | type I 3-dehydroquinate dehydratase | - |
| N8145_RS09220 (N8145_09220) | 1933831..1934253 | + | 423 | WP_002457221.1 | organic hydroperoxide resistance protein | - |
| N8145_RS09225 (N8145_09225) | 1934437..1934574 | - | 138 | WP_162158130.1 | IS1182 family transposase IS1272 | Transposase |
| N8145_RS09230 (N8145_09230) | 1934604..1934791 | - | 188 | Protein_1784 | hypothetical protein | - |
| N8145_RS09235 (N8145_09235) | 1935178..1935678 | + | 501 | WP_001829623.1 | GNAT family N-acetyltransferase | - |
| N8145_RS09240 (N8145_09240) | 1935949..1936536 | - | 588 | WP_001829615.1 | histidine phosphatase family protein | - |
| N8145_RS09245 (N8145_09245) | 1936750..1936986 | + | 237 | WP_002457224.1 | hypothetical protein | - |
| N8145_RS09250 (N8145_09250) | 1936978..1937181 | - | 204 | WP_002438966.1 | sterile alpha motif-like domain-containing protein | - |
| N8145_RS09255 (N8145_09255) | 1937590..1937847 | + | 258 | WP_002438963.1 | hypothetical protein | Antitoxin Detail |
| N8145_RS09260 (N8145_09260) | 1937872..1938060 | + | 189 | WP_001829569.1 | hypothetical protein | Toxin Detail |
| N8145_RS09265 (N8145_09265) | 1938250..1938804 | + | 555 | WP_001829566.1 | lipoprotein N-acylation protein LnsA | - |
| N8145_RS09270 (N8145_09270) | 1938864..1939097 | - | 234 | WP_001829664.1 | hypothetical protein | - |
| N8145_RS09275 (N8145_09275) | 1939381..1940127 | + | 747 | WP_002438959.1 | poly-gamma-glutamate hydrolase family protein | - |
| N8145_RS09280 (N8145_09280) | 1940226..1940510 | + | 285 | WP_001829635.1 | hypothetical protein | - |
| N8145_RS09285 (N8145_09285) | 1940534..1940758 | + | 225 | WP_001829613.1 | hypothetical protein | - |
| N8145_RS09290 (N8145_09290) | 1941379..1941579 | - | 201 | WP_001829681.1 | cold-shock protein | - |
| N8145_RS09295 (N8145_09295) | 1942945..1943886 | - | 942 | WP_001829688.1 | cation diffusion facilitator family transporter | - |
| N8145_RS09300 (N8145_09300) | 1944173..1944679 | + | 507 | WP_263266546.1 | DUF1440 domain-containing protein | - |
| N8145_RS09305 (N8145_09305) | 1946165..1946581 | + | 417 | WP_002468671.1 | VOC family protein | - |
| N8145_RS09310 (N8145_09310) | 1946801..1947145 | - | 345 | WP_001832602.1 | DUF4260 domain-containing protein | - |
| N8145_RS09315 (N8145_09315) | 1947372..1948679 | + | 1308 | WP_001832616.1 | potassium transporter TrkG | - |
| N8145_RS09320 (N8145_09320) | 1949292..1949525 | + | 234 | WP_001829658.1 | hypothetical protein | - |
| N8145_RS09325 (N8145_09325) | 1949783..1949953 | - | 171 | WP_001829642.1 | hypothetical protein | - |
| N8145_RS09330 (N8145_09330) | 1950688..1951230 | + | 543 | WP_001832592.1 | hypothetical protein | - |
| N8145_RS09335 (N8145_09335) | 1951374..1951553 | - | 180 | WP_001829655.1 | hypothetical protein | - |
| N8145_RS09340 (N8145_09340) | 1951704..1952150 | + | 447 | WP_002499033.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| N8145_RS09345 (N8145_09345) | 1952163..1952837 | + | 675 | WP_001829583.1 | hypothetical protein | - |
| N8145_RS09355 (N8145_09355) | 1953389..1953859 | - | 471 | WP_001829588.1 | SsrA-binding protein SmpB | - |
| N8145_RS09360 (N8145_09360) | 1953884..1956262 | - | 2379 | WP_001829677.1 | ribonuclease R | - |
| N8145_RS09365 (N8145_09365) | 1956297..1957037 | - | 741 | WP_001829672.1 | carboxylesterase | - |
| N8145_RS09370 (N8145_09370) | 1957338..1957571 | - | 234 | WP_001829669.1 | preprotein translocase subunit SecG | - |
| N8145_RS09375 (N8145_09375) | 1957640..1958098 | - | 459 | WP_001829646.1 | hypothetical protein | - |
| N8145_RS09380 (N8145_09380) | 1958264..1959568 | - | 1305 | WP_001829595.1 | phosphopyruvate hydratase | - |
| N8145_RS09385 (N8145_09385) | 1959707..1961224 | - | 1518 | WP_018113897.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|