MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 115217 bp
Accession: NZ_CP106682 Location: 3683374..3798590 Organism: Pseudomonas aeruginosa strain PALA13 Replicon: chromosome
Accession: NZ_CP106682 Location: 3683374..3798590 Organism: Pseudomonas aeruginosa strain PALA13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA13_RS17040 (PALA13_03386) | 3679118..3679651 | - | 534 | WP_003099002.1 | ProQ/FINO family protein | - |
| PALA13_RS17045 (PALA13_03387) | 3679742..3682720 | - | 2979 | WP_031633383.1 | transporter substrate-binding domain-containing protein | - |
| PALA13_RS17050 (PALA13_03388) | 3683780..3684280 | - | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA13_RS17055 (PALA13_03389) | 3684732..3685478 | + | 747 | WP_003120040.1 | hypothetical protein | - |
| PALA13_RS17060 (PALA13_03390) | 3685597..3685809 | + | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA13_RS17065 (PALA13_03391) | 3685852..3686727 | + | 876 | WP_003090095.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA13_RS17070 (PALA13_03392) | 3686711..3686980 | + | 270 | WP_023087326.1 | hypothetical protein | - |
| PALA13_RS17075 (PALA13_03393) | 3686973..3688652 | + | 1680 | WP_023087325.1 | ParB family protein | - |
| PALA13_RS17080 (PALA13_03394) | 3688667..3689227 | + | 561 | WP_023087324.1 | DUF2857 domain-containing protein | - |
| PALA13_RS17085 (PALA13_03395) | 3689231..3690463 | + | 1233 | WP_023087323.1 | STY4528 family pathogenicity island replication protein | - |
| PALA13_RS17090 (PALA13_03396) | 3690893..3691687 | + | 795 | WP_023087322.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA13_RS17095 (PALA13_03397) | 3691684..3692211 | + | 528 | WP_023087321.1 | DUF3158 family protein | - |
| PALA13_RS17100 (PALA13_03398) | 3692285..3692737 | + | 453 | WP_013391788.1 | single-stranded DNA-binding protein | - |
| PALA13_RS17105 (PALA13_03399) | 3693014..3695044 | + | 2031 | WP_023087320.1 | DNA topoisomerase III | - |
| PALA13_RS17110 (PALA13_03400) | 3695576..3697185 | + | 1610 | Protein_3386 | DNA cytosine methyltransferase | - |
| PALA13_RS17115 (PALA13_03402) | 3697429..3697986 | + | 558 | WP_023087317.1 | hypothetical protein | - |
| PALA13_RS17120 (PALA13_03403) | 3698320..3698541 | + | 222 | WP_003120032.1 | hypothetical protein | - |
| PALA13_RS17125 (PALA13_03404) | 3698563..3698955 | + | 393 | WP_003050375.1 | hypothetical protein | - |
| PALA13_RS17130 (PALA13_03405) | 3699138..3699824 | + | 687 | WP_003116830.1 | hypothetical protein | - |
| PALA13_RS17135 (PALA13_03406) | 3699908..3700645 | + | 738 | WP_023087316.1 | hypothetical protein | - |
| PALA13_RS17140 (PALA13_03407) | 3700743..3701021 | + | 279 | WP_003116828.1 | hypothetical protein | - |
| PALA13_RS17145 (PALA13_03408) | 3701310..3702134 | + | 825 | WP_003098941.1 | hypothetical protein | - |
| PALA13_RS17150 (PALA13_03410) | 3702396..3702803 | - | 408 | WP_003098939.1 | Hg(II)-responsive transcriptional regulator | - |
| PALA13_RS17155 (PALA13_03411) | 3702875..3703225 | + | 351 | WP_011804695.1 | mercuric ion transporter MerT | - |
| PALA13_RS17160 (PALA13_03412) | 3703238..3703525 | + | 288 | WP_003116826.1 | mercury resistance system periplasmic binding protein MerP | - |
| PALA13_RS17165 (PALA13_03413) | 3703536..3705224 | + | 1689 | WP_003098932.1 | mercury(II) reductase | - |
| PALA13_RS17170 | 3705249..3706240 | + | 992 | Protein_3398 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PALA13_RS17175 (PALA13_03415) | 3706286..3706570 | + | 285 | WP_031629745.1 | DUF3085 domain-containing protein | - |
| PALA13_RS17180 | 3706878..3707162 | + | 285 | WP_003098923.1 | hypothetical protein | - |
| PALA13_RS17185 (PALA13_03417) | 3707473..3708378 | + | 906 | WP_003098919.1 | DUF3577 domain-containing protein | - |
| PALA13_RS17190 (PALA13_03418) | 3708524..3709351 | + | 828 | WP_003098915.1 | DUF932 domain-containing protein | - |
| PALA13_RS17195 (PALA13_03419) | 3709446..3710135 | + | 690 | WP_003098913.1 | DUF3275 family protein | - |
| PALA13_RS17200 | 3710230..3710568 | + | 339 | Protein_3404 | hypothetical protein | - |
| PALA13_RS17205 (PALA13_03421) | 3710675..3711082 | + | 408 | WP_003098908.1 | hypothetical protein | - |
| PALA13_RS17210 (PALA13_03422) | 3711099..3711359 | + | 261 | WP_003098905.1 | hypothetical protein | - |
| PALA13_RS17215 (PALA13_03423) | 3711436..3712083 | + | 648 | WP_023087314.1 | hypothetical protein | - |
| PALA13_RS17220 (PALA13_03424) | 3712148..3713257 | + | 1110 | WP_006226016.1 | DUF6094 domain-containing protein | - |
| PALA13_RS17225 (PALA13_03425) | 3713308..3713628 | + | 321 | WP_023087313.1 | hypothetical protein | - |
| PALA13_RS17230 (PALA13_03426) | 3713718..3714023 | + | 306 | WP_023087312.1 | hypothetical protein | - |
| PALA13_RS17235 (PALA13_03427) | 3714159..3716438 | + | 2280 | WP_023087311.1 | helicase-related protein | - |
| PALA13_RS17240 (PALA13_03428) | 3716577..3717176 | + | 600 | WP_023087310.1 | hypothetical protein | VF |
| PALA13_RS17245 (PALA13_03429) | 3717173..3717817 | + | 645 | WP_023087309.1 | hypothetical protein | - |
| PALA13_RS17250 (PALA13_03430) | 3717830..3718567 | + | 738 | WP_023087308.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA13_RS17255 (PALA13_03431) | 3718549..3719139 | + | 591 | WP_003109780.1 | hypothetical protein | VF |
| PALA13_RS17260 (PALA13_03432) | 3719136..3719684 | + | 549 | WP_023087307.1 | integrating conjugative element protein | - |
| PALA13_RS17265 (PALA13_03433) | 3719689..3721881 | + | 2193 | WP_023087306.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA13_RS17270 (PALA13_03434) | 3721878..3722627 | + | 750 | WP_023087305.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA13_RS17275 (PALA13_03435) | 3722668..3725292 | - | 2625 | WP_003050276.1 | ATP-binding protein | - |
| PALA13_RS17280 (PALA13_03436) | 3725302..3726027 | - | 726 | WP_023087304.1 | CBASS effector endonuclease NucC | - |
| PALA13_RS17285 (PALA13_03437) | 3726064..3726966 | - | 903 | WP_023087303.1 | CBASS oligonucleotide cyclase | - |
| PALA13_RS17290 (PALA13_03438) | 3726966..3727466 | - | 501 | WP_003050262.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA13_RS17295 (PALA13_03439) | 3727463..3727933 | - | 471 | WP_023087302.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA13_RS17300 (PALA13_03440) | 3727930..3728844 | - | 915 | WP_023087301.1 | AAA family ATPase | - |
| PALA13_RS17305 (PALA13_03441) | 3728862..3729437 | - | 576 | WP_003050248.1 | PIN domain-containing protein | Toxin Detail |
| PALA13_RS17310 (PALA13_03442) | 3729434..3729904 | - | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA13_RS17315 (PALA13_03443) | 3730108..3730491 | + | 384 | WP_023087300.1 | RAQPRD family integrative conjugative element protein | - |
| PALA13_RS17320 (PALA13_03444) | 3730488..3730721 | + | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA13_RS17325 (PALA13_03445) | 3730738..3731097 | + | 360 | WP_021195311.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA13_RS17330 (PALA13_03446) | 3731110..3731508 | + | 399 | WP_003105639.1 | TIGR03750 family conjugal transfer protein | - |
| PALA13_RS17335 (PALA13_03447) | 3731505..3732197 | + | 693 | WP_023087299.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA13_RS17340 (PALA13_03448) | 3732194..3733105 | + | 912 | WP_023087298.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA13_RS17345 (PALA13_03449) | 3733095..3734513 | + | 1419 | WP_023087297.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA13_RS17350 (PALA13_03450) | 3734494..3734943 | + | 450 | WP_023087296.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA13_RS17355 (PALA13_03451) | 3734943..3737819 | + | 2877 | WP_269973642.1 | conjugative transfer ATPase | - |
| PALA13_RS17360 (PALA13_03452) | 3737844..3738608 | + | 765 | WP_023087294.1 | thioredoxin domain-containing protein | - |
| PALA13_RS17365 (PALA13_03453) | 3738760..3739275 | + | 516 | WP_071535069.1 | DNA repair protein RadC | - |
| PALA13_RS17370 (PALA13_03454) | 3739439..3739885 | + | 447 | WP_023087292.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA13_RS17375 (PALA13_03455) | 3739882..3740829 | + | 948 | WP_023087291.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA13_RS17380 (PALA13_03456) | 3740839..3742233 | + | 1395 | WP_023087290.1 | integrating conjugative element protein | - |
| PALA13_RS17385 (PALA13_03457) | 3742230..3742589 | + | 360 | WP_023087289.1 | hypothetical protein | - |
| PALA13_RS17390 (PALA13_03458) | 3742603..3744126 | + | 1524 | WP_023087288.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA13_RS17395 (PALA13_03459) | 3744133..3744492 | - | 360 | WP_023087287.1 | DUF3742 family protein | - |
| PALA13_RS17400 (PALA13_03460) | 3744519..3744977 | - | 459 | WP_009518525.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| PALA13_RS17405 (PALA13_03461) | 3744977..3745294 | - | 318 | WP_023087286.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| PALA13_RS17410 (PALA13_03462) | 3745594..3747459 | + | 1866 | WP_023087285.1 | MobH family relaxase | - |
| PALA13_RS17415 (PALA13_03463) | 3747515..3748063 | - | 549 | WP_228379159.1 | MerR family DNA-binding protein | - |
| PALA13_RS17420 | 3748082..3748516 | + | 435 | WP_078452152.1 | hypothetical protein | - |
| PALA13_RS17425 (PALA13_03464) | 3748671..3749072 | + | 402 | WP_023087283.1 | hypothetical protein | - |
| PALA13_RS17430 (PALA13_03465) | 3749084..3749323 | + | 240 | WP_023087282.1 | DUF2933 domain-containing protein | - |
| PALA13_RS17435 (PALA13_03466) | 3749320..3749970 | + | 651 | WP_023087281.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PALA13_RS17440 (PALA13_03467) | 3750141..3751004 | + | 864 | WP_023087280.1 | polyphosphate kinase 2 | - |
| PALA13_RS17445 (PALA13_03468) | 3751037..3753502 | + | 2466 | WP_023087279.1 | heavy metal translocating P-type ATPase | - |
| PALA13_RS17450 (PALA13_03469) | 3753534..3754841 | + | 1308 | WP_033873214.1 | MFS transporter | - |
| PALA13_RS17455 (PALA13_03470) | 3754838..3755449 | + | 612 | WP_023087277.1 | LemA family protein | - |
| PALA13_RS17460 (PALA13_03471) | 3755451..3756356 | + | 906 | WP_023087276.1 | TPM domain-containing protein | - |
| PALA13_RS17465 (PALA13_03472) | 3756358..3756855 | + | 498 | WP_003121538.1 | TPM domain-containing protein | - |
| PALA13_RS17470 (PALA13_03473) | 3756881..3758242 | + | 1362 | WP_023087275.1 | MBL fold metallo-hydrolase | - |
| PALA13_RS17475 (PALA13_03474) | 3758239..3759780 | + | 1542 | WP_023087274.1 | thymidine phosphorylase family protein | - |
| PALA13_RS17480 (PALA13_03475) | 3759777..3760676 | + | 900 | WP_023087273.1 | ribose-phosphate pyrophosphokinase | - |
| PALA13_RS17485 (PALA13_03476) | 3760730..3761374 | + | 645 | WP_003121541.1 | hypothetical protein | - |
| PALA13_RS17490 (PALA13_03477) | 3761371..3761625 | + | 255 | WP_009516033.1 | hypothetical protein | - |
| PALA13_RS17495 (PALA13_03478) | 3761622..3762653 | + | 1032 | WP_023087271.1 | hydroxyacid dehydrogenase | - |
| PALA13_RS17500 (PALA13_03479) | 3762650..3764272 | + | 1623 | WP_023087270.1 | AarF/UbiB family protein | - |
| PALA13_RS17505 (PALA13_03480) | 3764300..3765355 | + | 1056 | WP_023087269.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| PALA13_RS17510 (PALA13_03481) | 3765352..3766614 | + | 1263 | WP_023087268.1 | MgtC/SapB family protein | - |
| PALA13_RS17515 (PALA13_03482) | 3766776..3769205 | - | 2430 | WP_023087267.1 | hypothetical protein | - |
| PALA13_RS17520 (PALA13_03483) | 3769312..3770640 | - | 1329 | WP_023087266.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| PALA13_RS17525 (PALA13_03484) | 3770795..3771247 | - | 453 | WP_023087265.1 | MerR family transcriptional regulator | - |
| PALA13_RS17530 (PALA13_03485) | 3771465..3772598 | - | 1134 | WP_023087264.1 | acetate/propionate family kinase | - |
| PALA13_RS17535 (PALA13_03486) | 3772894..3774561 | - | 1668 | WP_023087263.1 | DUF3141 domain-containing protein | - |
| PALA13_RS17540 (PALA13_03487) | 3774570..3774869 | - | 300 | WP_003090284.1 | heavy-metal-associated domain-containing protein | - |
| PALA13_RS17545 (PALA13_03488) | 3774888..3775214 | - | 327 | WP_023087262.1 | DUF2933 domain-containing protein | - |
| PALA13_RS17550 (PALA13_03489) | 3775851..3777287 | - | 1437 | WP_044305157.1 | Sensor histidine kinase CusS | VF |
| PALA13_RS17555 (PALA13_03490) | 3777259..3777951 | - | 693 | WP_003097513.1 | Transcriptional regulatory protein CusR | VF |
| PALA13_RS17560 (PALA13_03491) | 3778206..3780125 | + | 1920 | WP_023109461.1 | copper resistance system multicopper oxidase | - |
| PALA13_RS17565 (PALA13_03492) | 3780151..3781131 | + | 981 | WP_005408883.1 | copper resistance protein B | - |
| PALA13_RS17570 (PALA13_03493) | 3781169..3781654 | + | 486 | WP_023087259.1 | DUF411 domain-containing protein | - |
| PALA13_RS17575 (PALA13_03494) | 3781688..3781960 | + | 273 | WP_006226242.1 | DUF2933 domain-containing protein | - |
| PALA13_RS17580 (PALA13_03495) | 3782248..3784554 | + | 2307 | WP_196656379.1 | heavy metal translocating P-type ATPase | - |
| PALA13_RS17585 (PALA13_03496) | 3784696..3785082 | + | 387 | WP_008063308.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA13_RS17590 (PALA13_03497) | 3785087..3786013 | + | 927 | WP_023087257.1 | copper homeostasis membrane protein CopD | - |
| PALA13_RS17595 (PALA13_03498) | 3786142..3786426 | + | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA13_RS17600 (PALA13_03499) | 3786660..3787550 | + | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA13_RS17605 | 3787555..3787860 | - | 306 | WP_003097526.1 | helix-turn-helix transcriptional regulator | - |
| PALA13_RS17610 | 3787968..3788609 | + | 642 | WP_071534919.1 | LysR substrate-binding domain-containing protein | - |
| PALA13_RS17615 | 3788896..3789207 | + | 312 | WP_196643839.1 | hypothetical protein | - |
| PALA13_RS17620 (PALA13_03501) | 3789355..3790590 | + | 1236 | WP_031633930.1 | TolC family protein | - |
| PALA13_RS17625 (PALA13_03502) | 3790606..3792117 | + | 1512 | WP_023087253.1 | hypothetical protein | VF |
| PALA13_RS17630 (PALA13_03503) | 3792114..3795245 | + | 3132 | WP_023087252.1 | efflux RND transporter permease subunit | - |
| PALA13_RS17635 (PALA13_03504) | 3795601..3795927 | - | 327 | Protein_3491 | IS3 family transposase ISPa56 | Transposase |
| PALA13_RS17640 (PALA13_03505) | 3796187..3796360 | + | 174 | WP_023087250.1 | hypothetical protein | - |
| PALA13_RS17645 (PALA13_03506) | 3796424..3798346 | - | 1923 | WP_023087249.1 | hypothetical protein ; Integrase | Integrase |
| PALA13_RS17655 (PALA13_03508) | 3798719..3799279 | - | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA13_RS17660 (PALA13_03509) | 3799313..3801139 | - | 1827 | WP_003097551.1 | excinuclease ABC subunit UvrC | - |
| PALA13_RS17665 (PALA13_03510) | 3801140..3801784 | - | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA13_RS17670 (PALA13_03511) | 3802126..3803274 | - | 1149 | WP_003119987.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|