MGE detailed information
MGE type: Conjugative plasmid MGE length: 92922 bp
Accession: NZ_CP104927 Location: 1..92922 Organism: Klebsiella pasteurii strain AHM8C130-1I Replicon: plasmid pHNAH8130-1
Accession: NZ_CP104927 Location: 1..92922 Organism: Klebsiella pasteurii strain AHM8C130-1I Replicon: plasmid pHNAH8130-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5863_RS28985 (N5863_28980) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| N5863_RS28990 (N5863_28985) | 1709..2449 | - | 741 | WP_284659165.1 | tyrosine-type recombinase/integrase | - |
| N5863_RS28995 (N5863_28990) | 2811..3107 | - | 297 | WP_284659166.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5863_RS29000 (N5863_28995) | 3094..3360 | - | 267 | WP_284659167.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| N5863_RS29005 (N5863_29000) | 3571..3959 | - | 389 | Protein_4 | transposase | - |
| N5863_RS29010 (N5863_29005) | 4326..5243 | + | 918 | WP_284659168.1 | winged helix-turn-helix domain-containing protein | - |
| N5863_RS29015 (N5863_29010) | 5377..5940 | + | 564 | WP_284659169.1 | hypothetical protein | - |
| N5863_RS29020 (N5863_29015) | 7792..8385 | + | 594 | WP_284659170.1 | hypothetical protein | - |
| N5863_RS29025 (N5863_29020) | 8545..9300 | + | 756 | WP_284659171.1 | putative fimbrial chaperone YraI | VF |
| N5863_RS29030 (N5863_29025) | 9300..9935 | + | 636 | WP_284659172.1 | hypothetical protein | - |
| N5863_RS29035 (N5863_29030) | 9972..10616 | + | 645 | WP_284659173.1 | hypothetical protein | - |
| N5863_RS29040 (N5863_29035) | 10654..11262 | + | 609 | WP_284659174.1 | hypothetical protein | - |
| N5863_RS29045 (N5863_29040) | 11332..12024 | + | 693 | WP_284659175.1 | Chaperone protein FimC | VF |
| N5863_RS29050 (N5863_29045) | 12407..13237 | + | 831 | WP_284659176.1 | putative fimbrial chaperone protein ElfD | VF |
| N5863_RS29055 (N5863_29050) | 13234..15924 | + | 2691 | WP_284659177.1 | Outer membrane usher protein FimD | VF |
| N5863_RS29060 (N5863_29055) | 16353..17666 | + | 1314 | WP_284659178.1 | hypothetical protein | - |
| N5863_RS29065 (N5863_29060) | 18176..18781 | + | 606 | WP_284659179.1 | hypothetical protein | - |
| N5863_RS29070 (N5863_29065) | 18995..20105 | + | 1111 | WP_284659180.1 | IS3 family transposase IS1400 | Transposase |
| N5863_RS29075 (N5863_29070) | 20108..21255 | + | 1148 | WP_284659196.1 | IS3 family transposase ISEhe3 | Transposase |
| N5863_RS29080 (N5863_29075) | 21299..21862 | + | 564 | WP_284659181.1 | hypothetical protein | VF |
| N5863_RS29085 (N5863_29080) | 21974..22459 | - | 486 | WP_284659182.1 | hypothetical protein | - |
| N5863_RS29090 (N5863_29085) | 22449..23180 | - | 732 | WP_284659183.1 | winged helix-turn-helix domain-containing protein | - |
| N5863_RS29095 (N5863_29090) | 23631..24170 | + | 540 | Protein_22 | hypothetical protein | - |
| N5863_RS29100 (N5863_29095) | 24195..24452 | + | 258 | WP_284659201.1 | hypothetical protein | - |
| N5863_RS29105 (N5863_29100) | 24525..24791 | + | 267 | WP_284659184.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| N5863_RS29110 (N5863_29105) | 24779..25261 | + | 483 | WP_284659185.1 | GNAT family N-acetyltransferase | Toxin Detail |
| N5863_RS29115 (N5863_29110) | 25613..28564 | + | 2952 | WP_050484548.1 | hypothetical protein | - |
| N5863_RS29120 (N5863_29115) | 28548..29000 | + | 453 | WP_072023797.1 | response regulator | - |
| N5863_RS29125 (N5863_29120) | 28997..30157 | + | 1161 | WP_110183785.1 | hypothetical protein | - |
| N5863_RS29130 (N5863_29125) | 30959..31378 | + | 420 | WP_284659186.1 | ASCH domain-containing protein | - |
| N5863_RS29135 (N5863_29130) | 31634..32812 | + | 1179 | WP_284659187.1 | hypothetical protein | - |
| N5863_RS29140 (N5863_29135) | 32865..33188 | - | 324 | WP_070611377.1 | hypothetical protein | - |
| N5863_RS29145 (N5863_29140) | 33261..34256 | - | 996 | WP_047665792.1 | hypothetical protein | - |
| N5863_RS29150 (N5863_29145) | 34358..35272 | - | 915 | WP_284659188.1 | J domain-containing protein | - |
| N5863_RS29155 (N5863_29150) | 35527..35724 | - | 198 | WP_047665793.1 | hypothetical protein | - |
| N5863_RS29160 (N5863_29155) | 35910..36458 | - | 549 | WP_126065543.1 | thioredoxin fold domain-containing protein | - |
| N5863_RS29165 (N5863_29160) | 37506..38519 | - | 1014 | WP_284659189.1 | plasmid replication initiator RepA | - |
| N5863_RS29170 (N5863_29165) | 38512..39063 | - | 552 | WP_284659190.1 | plasmid replication initiator RepA | - |
| N5863_RS29175 (N5863_29170) | 39056..39127 | - | 72 | WP_142469928.1 | RepA leader peptide Tap | - |
| N5863_RS29180 (N5863_29175) | 39353..39613 | - | 261 | WP_284659191.1 | replication regulatory protein RepA | - |
| N5863_RS29185 (N5863_29180) | 39743..40294 | - | 552 | WP_284659197.1 | phospholipase D family protein | - |
| N5863_RS29190 (N5863_29185) | 40394..40702 | - | 309 | WP_284659192.1 | hypothetical protein | - |
| N5863_RS29195 (N5863_29190) | 40699..41349 | - | 651 | WP_284659193.1 | DUF2726 domain-containing protein | - |
| N5863_RS29200 (N5863_29195) | 41405..42049 | - | 645 | WP_211811642.1 | hypothetical protein | - |
| N5863_RS29205 (N5863_29200) | 42726..43319 | - | 594 | WP_049141667.1 | fertility inhibition protein FinO | - |
| N5863_RS29210 (N5863_29205) | 43475..44200 | - | 726 | WP_284659194.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| N5863_RS29215 (N5863_29210) | 44257..49518 | - | 5262 | WP_284659195.1 | Multifunctional conjugation protein TraI | Relaxase |
| N5863_RS29220 (N5863_29215) | 49518..51818 | - | 2301 | WP_284659122.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5863_RS29225 (N5863_29220) | 52034..52705 | - | 672 | WP_284659123.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| N5863_RS29230 (N5863_29225) | 52755..53393 | - | 639 | WP_284659124.1 | hypothetical protein | - |
| N5863_RS29235 (N5863_29230) | 53418..56276 | - | 2859 | WP_284659125.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N5863_RS29240 (N5863_29235) | 56276..57646 | - | 1371 | WP_284659126.1 | conjugal transfer pilus assembly protein TraH | - |
| N5863_RS29245 (N5863_29240) | 57633..58208 | - | 576 | WP_284659127.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N5863_RS29250 (N5863_29245) | 58180..58419 | - | 240 | WP_284659128.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N5863_RS29255 (N5863_29250) | 58430..59182 | - | 753 | WP_284659129.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N5863_RS29260 (N5863_29255) | 59203..59529 | - | 327 | WP_284659130.1 | hypothetical protein | - |
| N5863_RS29265 (N5863_29260) | 59542..59790 | - | 249 | WP_284659131.1 | hypothetical protein | - |
| N5863_RS29270 (N5863_29265) | 59768..60028 | - | 261 | WP_284659132.1 | conjugal transfer protein TrbE | - |
| N5863_RS29275 (N5863_29270) | 60018..60299 | - | 282 | WP_142480832.1 | hypothetical protein | - |
| N5863_RS29280 (N5863_29275) | 60332..62212 | - | 1881 | WP_284659133.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N5863_RS29285 (N5863_29280) | 62209..62592 | - | 384 | WP_284659134.1 | hypothetical protein | - |
| N5863_RS29290 (N5863_29285) | 62589..63227 | - | 639 | WP_284659135.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N5863_RS29295 (N5863_29290) | 63240..64223 | - | 984 | WP_284659198.1 | conjugal transfer pilus assembly protein TraU | - |
| N5863_RS29300 (N5863_29295) | 64243..64869 | - | 627 | WP_284659136.1 | type-F conjugative transfer system protein TraW | - |
| N5863_RS29305 (N5863_29300) | 64866..65273 | - | 408 | WP_284659199.1 | type-F conjugative transfer system protein TrbI | - |
| N5863_RS29310 (N5863_29305) | 65306..67945 | - | 2640 | WP_284659137.1 | type IV secretion system protein TraC | - |
| N5863_RS29315 (N5863_29310) | 68049..68348 | - | 300 | WP_284659138.1 | hypothetical protein | - |
| N5863_RS29320 (N5863_29315) | 68345..68749 | - | 405 | WP_284659139.1 | hypothetical protein | - |
| N5863_RS29325 (N5863_29320) | 68746..68967 | - | 222 | WP_284659140.1 | hypothetical protein | - |
| N5863_RS29330 (N5863_29325) | 68992..69414 | - | 423 | WP_284659141.1 | hypothetical protein | - |
| N5863_RS29335 (N5863_29330) | 69496..69894 | - | 399 | WP_284659142.1 | hypothetical protein | - |
| N5863_RS29340 (N5863_29335) | 70060..70641 | - | 582 | WP_284659143.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N5863_RS29345 (N5863_29340) | 70664..70888 | - | 225 | WP_284659144.1 | hypothetical protein | - |
| N5863_RS29350 (N5863_29345) | 70869..71465 | - | 597 | WP_284659145.1 | conjugal transfer protein TraP | - |
| N5863_RS29355 (N5863_29350) | 71458..72873 | - | 1416 | WP_284659146.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N5863_RS29360 (N5863_29355) | 72873..73613 | - | 741 | WP_284659147.1 | type-F conjugative transfer system secretin TraK | - |
| N5863_RS29365 (N5863_29360) | 73600..74166 | - | 567 | WP_284659148.1 | type IV conjugative transfer system protein TraE | - |
| N5863_RS29370 (N5863_29365) | 74186..74491 | - | 306 | WP_020323523.1 | type IV conjugative transfer system protein TraL | - |
| N5863_RS29375 (N5863_29370) | 74505..74870 | - | 366 | WP_284659149.1 | type IV conjugative transfer system pilin TraA | - |
| N5863_RS29380 (N5863_29375) | 74938..75138 | - | 201 | WP_284659150.1 | TraY domain-containing protein | - |
| N5863_RS29385 (N5863_29380) | 75222..75926 | - | 705 | WP_284659151.1 | hypothetical protein | - |
| N5863_RS29390 (N5863_29385) | 76164..76556 | - | 393 | WP_284659152.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N5863_RS29395 (N5863_29390) | 76989..77474 | + | 486 | WP_284659200.1 | hypothetical protein | VF |
| N5863_RS29400 (N5863_29395) | 77507..77836 | - | 330 | WP_284659153.1 | DUF5983 family protein | - |
| N5863_RS29405 (N5863_29400) | 77869..78690 | - | 822 | WP_284659154.1 | DUF932 domain-containing protein | - |
| N5863_RS29410 (N5863_29405) | 79462..79600 | - | 139 | Protein_85 | class I SAM-dependent methyltransferase | - |
| N5863_RS29415 (N5863_29410) | 79978..80540 | - | 563 | Protein_86 | methyltransferase | - |
| N5863_RS29420 (N5863_29415) | 80588..81943 | - | 1356 | WP_284659155.1 | DUF3560 domain-containing protein | - |
| N5863_RS29425 (N5863_29420) | 81995..82225 | - | 231 | WP_284659156.1 | hypothetical protein | - |
| N5863_RS29430 (N5863_29425) | 82317..82544 | - | 228 | WP_284659157.1 | hypothetical protein | - |
| N5863_RS29435 (N5863_29430) | 83274..83591 | - | 318 | WP_284659158.1 | hypothetical protein | - |
| N5863_RS29440 (N5863_29435) | 83626..83880 | - | 255 | WP_004206775.1 | DNA polymerase III subunit theta | - |
| N5863_RS29445 (N5863_29440) | 84117..84542 | - | 426 | WP_284659159.1 | antirestriction protein | - |
| N5863_RS29450 (N5863_29445) | 85064..85294 | - | 231 | WP_004206779.1 | hypothetical protein | - |
| N5863_RS29455 (N5863_29450) | 85550..86769 | + | 1220 | Protein_94 | ISL3 family transposase ISCfr12 | Transposase |
| N5863_RS29460 (N5863_29455) | 86832..87257 | + | 426 | WP_009309980.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5863_RS29465 (N5863_29460) | 87257..88528 | + | 1272 | WP_284659160.1 | Y-family DNA polymerase | - |
| N5863_RS29470 (N5863_29465) | 88607..88858 | + | 252 | WP_284659161.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| N5863_RS29475 (N5863_29470) | 88972..89595 | + | 624 | WP_284659162.1 | hypothetical protein | - |
| N5863_RS29480 (N5863_29475) | 90035..91006 | - | 972 | WP_284659163.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N5863_RS29485 (N5863_29480) | 91006..92172 | - | 1167 | WP_284659164.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|