MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 124446 bp
Accession: NZ_CP104866 Location: 2648114..2772559 Organism: Pseudomonas aeruginosa strain PALA4 Replicon: chromosome
Accession: NZ_CP104866 Location: 2648114..2772559 Organism: Pseudomonas aeruginosa strain PALA4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PALA4_RS12430 (PALA4_02468) | 2643430..2644578 | + | 1149 | WP_003108790.1 | 2-heptyl-3-hydroxy-4(1H)-quinolone synthase | - |
| PALA4_RS12435 (PALA4_02469) | 2644920..2645564 | + | 645 | WP_003090351.1 | UvrY/SirA/GacA family response regulator transcription factor | - |
| PALA4_RS12440 (PALA4_02470) | 2645565..2647391 | + | 1827 | WP_003090350.1 | excinuclease ABC subunit UvrC | - |
| PALA4_RS12445 (PALA4_02471) | 2647425..2647985 | + | 561 | WP_003090349.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| PALA4_RS12455 (PALA4_02473) | 2648357..2650291 | + | 1935 | WP_023083474.1 | hypothetical protein ; Integrase | Integrase |
| PALA4_RS12460 | 2650585..2650918 | + | 334 | Protein_2463 | DUF2790 domain-containing protein | - |
| PALA4_RS12465 (PALA4_02474) | 2651052..2654171 | - | 3120 | WP_003090347.1 | efflux RND transporter permease subunit | - |
| PALA4_RS12470 (PALA4_02475) | 2654168..2655685 | - | 1518 | WP_003090346.1 | hypothetical protein | VF |
| PALA4_RS12475 (PALA4_02476) | 2655701..2657008 | - | 1308 | WP_023108471.1 | TolC family protein | - |
| PALA4_RS12480 | 2657084..2657395 | - | 312 | WP_006226245.1 | hypothetical protein | - |
| PALA4_RS12485 | 2657682..2658323 | - | 642 | WP_071659050.1 | LysR substrate-binding domain-containing protein | - |
| PALA4_RS12490 | 2658431..2658736 | + | 306 | WP_071659031.1 | helix-turn-helix transcriptional regulator | - |
| PALA4_RS12495 (PALA4_02478) | 2658741..2659631 | - | 891 | WP_003097524.1 | LysR family transcriptional regulator | - |
| PALA4_RS12500 (PALA4_02479) | 2659862..2660146 | - | 285 | WP_003090336.1 | CopK family periplasmic copper-binding protein | - |
| PALA4_RS12505 (PALA4_02480) | 2660275..2661201 | - | 927 | WP_003090321.1 | copper homeostasis membrane protein CopD | - |
| PALA4_RS12510 (PALA4_02481) | 2661206..2661592 | - | 387 | WP_003090319.1 | copper homeostasis periplasmic binding protein CopC | - |
| PALA4_RS12515 (PALA4_02482) | 2661734..2664040 | - | 2307 | WP_234385482.1 | heavy metal translocating P-type ATPase | - |
| PALA4_RS12520 (PALA4_02483) | 2664328..2664600 | - | 273 | WP_023108470.1 | DUF2933 domain-containing protein | - |
| PALA4_RS12525 (PALA4_02484) | 2664634..2665119 | - | 486 | WP_003090303.1 | DUF411 domain-containing protein | - |
| PALA4_RS12530 (PALA4_02485) | 2665157..2666137 | - | 981 | WP_005408883.1 | copper resistance protein B | - |
| PALA4_RS12535 (PALA4_02486) | 2666163..2668109 | - | 1947 | WP_023108469.1 | copper resistance system multicopper oxidase | - |
| PALA4_RS12540 (PALA4_02487) | 2668364..2669056 | + | 693 | WP_023108468.1 | Transcriptional regulatory protein CusR | VF |
| PALA4_RS12545 (PALA4_02488) | 2669028..2670464 | + | 1437 | WP_042173859.1 | Sensor histidine kinase CusS | VF |
| PALA4_RS12550 (PALA4_02489) | 2671099..2671425 | + | 327 | WP_003090285.1 | DUF2933 domain-containing protein | - |
| PALA4_RS12555 (PALA4_02490) | 2671444..2671743 | + | 300 | WP_003090284.1 | heavy-metal-associated domain-containing protein | - |
| PALA4_RS12560 (PALA4_02491) | 2671752..2673419 | + | 1668 | WP_003090283.1 | DUF3141 domain-containing protein | - |
| PALA4_RS12565 (PALA4_02492) | 2673715..2674848 | + | 1134 | WP_003090282.1 | acetate/propionate family kinase | - |
| PALA4_RS12570 (PALA4_02493) | 2675066..2675518 | + | 453 | WP_009516039.1 | MerR family DNA-binding protein | - |
| PALA4_RS12575 (PALA4_02494) | 2675673..2676989 | + | 1317 | WP_006226050.1 | cyclopropane-fatty-acyl-phospholipid synthase family protein | - |
| PALA4_RS12580 (PALA4_02495) | 2677107..2679536 | + | 2430 | WP_003090278.1 | D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase | - |
| PALA4_RS12585 (PALA4_02496) | 2679713..2680315 | - | 603 | WP_009516037.1 | hypothetical protein | VF |
| PALA4_RS12590 (PALA4_02497) | 2680421..2681251 | + | 831 | WP_003090276.1 | hypothetical protein | VF |
| PALA4_RS12595 (PALA4_02498) | 2681260..2682522 | - | 1263 | WP_003090275.1 | MgtC/SapB family protein | - |
| PALA4_RS12600 (PALA4_02499) | 2682519..2683574 | - | 1056 | WP_003090274.1 | type II glyceraldehyde-3-phosphate dehydrogenase | - |
| PALA4_RS12605 (PALA4_02500) | 2683602..2685224 | - | 1623 | WP_023108466.1 | AarF/UbiB family protein | - |
| PALA4_RS12610 (PALA4_02501) | 2685221..2686252 | - | 1032 | WP_003090272.1 | hydroxyacid dehydrogenase | - |
| PALA4_RS12615 (PALA4_02502) | 2686249..2686503 | - | 255 | WP_006226045.1 | hypothetical protein | - |
| PALA4_RS12620 (PALA4_02503) | 2686500..2687144 | - | 645 | WP_003090270.1 | hypothetical protein | - |
| PALA4_RS12625 (PALA4_02504) | 2687198..2688097 | - | 900 | WP_003090267.1 | ribose-phosphate pyrophosphokinase | - |
| PALA4_RS12630 (PALA4_02505) | 2688094..2689659 | - | 1566 | WP_023108465.1 | thymidine phosphorylase family protein | - |
| PALA4_RS12635 (PALA4_02506) | 2689656..2691017 | - | 1362 | WP_003090261.1 | MBL fold metallo-hydrolase | - |
| PALA4_RS12640 (PALA4_02507) | 2691043..2691540 | - | 498 | WP_003090258.1 | TPM domain-containing protein | - |
| PALA4_RS12645 (PALA4_02508) | 2691542..2692447 | - | 906 | WP_023108464.1 | TPM domain-containing protein | - |
| PALA4_RS12650 (PALA4_02509) | 2692449..2693060 | - | 612 | WP_003090252.1 | LemA family protein | - |
| PALA4_RS12655 (PALA4_02510) | 2693057..2694364 | - | 1308 | WP_171942236.1 | MFS transporter | - |
| PALA4_RS12660 (PALA4_02511) | 2694396..2696861 | - | 2466 | WP_006226038.1 | heavy metal translocating P-type ATPase | - |
| PALA4_RS12665 (PALA4_02512) | 2696894..2697757 | - | 864 | WP_003090242.1 | polyphosphate kinase 2 | - |
| PALA4_RS12670 (PALA4_02513) | 2697768..2697926 | - | 159 | WP_003090239.1 | hypothetical protein | - |
| PALA4_RS12675 (PALA4_02514) | 2697928..2698578 | - | 651 | WP_003090238.1 | isoprenylcysteine carboxylmethyltransferase family protein | - |
| PALA4_RS12680 (PALA4_02515) | 2698575..2698814 | - | 240 | WP_003090237.1 | DUF2933 domain-containing protein | - |
| PALA4_RS12685 (PALA4_02516) | 2698826..2699227 | - | 402 | WP_023108462.1 | hypothetical protein | - |
| PALA4_RS12690 | 2699382..2699816 | - | 435 | WP_079279895.1 | hypothetical protein | - |
| PALA4_RS12695 (PALA4_02517) | 2699960..2700382 | + | 423 | WP_003090234.1 | MerR family DNA-binding protein | - |
| PALA4_RS12700 | 2700617..2700949 | - | 333 | WP_228380005.1 | redox-sensitive transcriptional activator SoxR | - |
| PALA4_RS12705 (PALA4_02518) | 2700900..2701097 | + | 198 | WP_023108461.1 | hypothetical protein | - |
| PALA4_RS12710 (PALA4_02519) | 2701171..2702082 | + | 912 | WP_003090227.1 | NAD(P)H-binding protein | - |
| PALA4_RS12715 | 2702156..2702377 | + | 222 | WP_099459023.1 | MerR family DNA-binding transcriptional regulator | - |
| PALA4_RS12720 (PALA4_02520) | 2702359..2704176 | - | 1818 | WP_023108460.1 | MobH family relaxase | - |
| PALA4_RS12725 (PALA4_02521) | 2704476..2704793 | + | 318 | WP_023098543.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| PALA4_RS12730 (PALA4_02522) | 2704793..2705251 | + | 459 | WP_009518525.1 | type II toxin-antitoxin system YhaV family toxin | Toxin Detail |
| PALA4_RS12735 (PALA4_02523) | 2705278..2705655 | + | 378 | WP_009518524.1 | DUF3742 family protein | - |
| PALA4_RS12740 (PALA4_02524) | 2705671..2707188 | - | 1518 | WP_023108459.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| PALA4_RS12745 (PALA4_02525) | 2707203..2707562 | - | 360 | WP_023108458.1 | hypothetical protein | - |
| PALA4_RS12750 (PALA4_02526) | 2707559..2708953 | - | 1395 | WP_009518521.1 | integrating conjugative element protein | - |
| PALA4_RS12755 (PALA4_02527) | 2708963..2709910 | - | 948 | WP_023108457.1 | TIGR03756 family integrating conjugative element protein | - |
| PALA4_RS12760 (PALA4_02528) | 2709907..2710353 | - | 447 | WP_009518519.1 | TIGR03757 family integrating conjugative element protein | - |
| PALA4_RS12765 (PALA4_02529) | 2710517..2711011 | - | 495 | WP_009518518.1 | DNA repair protein RadC | - |
| PALA4_RS12770 (PALA4_02530) | 2711187..2711951 | - | 765 | WP_023098544.1 | thioredoxin domain-containing protein | - |
| PALA4_RS12775 (PALA4_02531) | 2711976..2714867 | - | 2892 | WP_023108456.1 | conjugative transfer ATPase | - |
| PALA4_RS12780 (PALA4_02532) | 2714867..2715316 | - | 450 | WP_023108455.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| PALA4_RS12785 (PALA4_02533) | 2715297..2716727 | - | 1431 | WP_009516218.1 | TIGR03752 family integrating conjugative element protein | - |
| PALA4_RS12790 (PALA4_02534) | 2716717..2717625 | - | 909 | WP_009516219.1 | TIGR03749 family integrating conjugative element protein | - |
| PALA4_RS12795 (PALA4_02535) | 2717622..2718314 | - | 693 | WP_009516220.1 | TIGR03746 family integrating conjugative element protein | - |
| PALA4_RS12800 (PALA4_02536) | 2718311..2718709 | - | 399 | WP_009516221.1 | TIGR03750 family conjugal transfer protein | - |
| PALA4_RS12805 (PALA4_02537) | 2718721..2719080 | - | 360 | WP_003090173.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| PALA4_RS12810 (PALA4_02538) | 2719097..2719330 | - | 234 | WP_003050225.1 | TIGR03758 family integrating conjugative element protein | - |
| PALA4_RS12815 (PALA4_02539) | 2719327..2719710 | - | 384 | WP_003090167.1 | RAQPRD family integrative conjugative element protein | - |
| PALA4_RS12820 (PALA4_02540) | 2719914..2720384 | + | 471 | WP_003050245.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PALA4_RS12825 (PALA4_02541) | 2720381..2720956 | + | 576 | WP_003153636.1 | PIN domain-containing protein | Toxin Detail |
| PALA4_RS12830 (PALA4_02542) | 2720974..2721888 | + | 915 | WP_003050256.1 | AAA family ATPase | - |
| PALA4_RS12835 (PALA4_02543) | 2721885..2722355 | + | 471 | WP_003090160.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap8 | - |
| PALA4_RS12840 (PALA4_02544) | 2722352..2722852 | + | 501 | WP_003090159.1 | type III CBASS phage resistance system CD-NTase-associated protein Cap7 | - |
| PALA4_RS12845 (PALA4_02545) | 2722852..2723754 | + | 903 | WP_003090158.1 | CBASS oligonucleotide cyclase | - |
| PALA4_RS12850 (PALA4_02546) | 2723793..2724518 | + | 726 | WP_003050273.1 | CBASS effector endonuclease NucC | - |
| PALA4_RS12855 (PALA4_02547) | 2724528..2727152 | + | 2625 | WP_023108454.1 | AAA family ATPase | - |
| PALA4_RS12860 (PALA4_02548) | 2727193..2727942 | - | 750 | WP_023108453.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| PALA4_RS12865 (PALA4_02549) | 2727939..2730131 | - | 2193 | WP_023108452.1 | type IV conjugative transfer system coupling protein TraD | - |
| PALA4_RS12870 (PALA4_02550) | 2730136..2730684 | - | 549 | WP_023108451.1 | integrating conjugative element protein | - |
| PALA4_RS12875 (PALA4_02551) | 2730681..2731271 | - | 591 | WP_023108450.1 | transglycosylase SLT domain-containing protein | - |
| PALA4_RS12880 (PALA4_02552) | 2731253..2731978 | - | 726 | WP_011804680.1 | TIGR03759 family integrating conjugative element protein | - |
| PALA4_RS12885 (PALA4_02553) | 2731995..2732630 | - | 636 | WP_011804681.1 | hypothetical protein | - |
| PALA4_RS12890 (PALA4_02554) | 2732627..2733193 | - | 567 | WP_011804682.1 | hypothetical protein | VF |
| PALA4_RS12895 (PALA4_02555) | 2733362..2733682 | + | 321 | WP_023108449.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| PALA4_RS12900 (PALA4_02556) | 2733685..2734179 | + | 495 | WP_011804684.1 | arsenate reductase ArsC | - |
| PALA4_RS12905 (PALA4_02557) | 2734190..2735266 | + | 1077 | WP_023108447.1 | ACR3 family arsenite efflux transporter | - |
| PALA4_RS12910 (PALA4_02558) | 2735283..2735705 | + | 423 | WP_011804686.1 | arsenate reductase (glutaredoxin) | - |
| PALA4_RS12915 (PALA4_02559) | 2735698..2736420 | + | 723 | WP_023108446.1 | arsenical resistance protein ArsH | - |
| PALA4_RS12920 (PALA4_02560) | 2736479..2737558 | - | 1080 | Protein_2555 | C-terminal helicase domain-containing protein | - |
| PALA4_RS12925 (PALA4_02561) | 2737641..2739344 | - | 1704 | WP_031631519.1 | group II intron reverse transcriptase/maturase | - |
| PALA4_RS12930 (PALA4_02562) | 2739941..2740141 | - | 201 | WP_031684077.1 | hypothetical protein | - |
| PALA4_RS12935 (PALA4_02563) | 2740209..2741927 | - | 1719 | WP_003116815.1 | group II intron reverse transcriptase/maturase | - |
| PALA4_RS12940 (PALA4_02564) | 2742545..2743579 | - | 1035 | Protein_2559 | DEAD/DEAH box helicase family protein | - |
| PALA4_RS12945 (PALA4_02565) | 2743716..2744021 | - | 306 | WP_011804740.1 | hypothetical protein | - |
| PALA4_RS12950 (PALA4_02566) | 2744111..2744431 | - | 321 | WP_023108443.1 | hypothetical protein | - |
| PALA4_RS12955 (PALA4_02567) | 2744482..2745591 | - | 1110 | WP_003098899.1 | DUF6094 domain-containing protein | - |
| PALA4_RS12960 (PALA4_02568) | 2745656..2746303 | - | 648 | WP_003098901.1 | hypothetical protein | - |
| PALA4_RS12965 (PALA4_02569) | 2746380..2746640 | - | 261 | WP_003098905.1 | hypothetical protein | - |
| PALA4_RS12970 (PALA4_02570) | 2746657..2747064 | - | 408 | WP_011804742.1 | hypothetical protein | - |
| PALA4_RS12975 (PALA4_02571) | 2747171..2747512 | - | 342 | WP_023108442.1 | hypothetical protein | - |
| PALA4_RS12980 (PALA4_02572) | 2747605..2748294 | - | 690 | WP_011804693.1 | DUF3275 family protein | - |
| PALA4_RS12985 (PALA4_02573) | 2748351..2749280 | - | 930 | WP_011804694.1 | DUF3577 domain-containing protein | - |
| PALA4_RS12990 (PALA4_02574) | 2749543..2750052 | - | 510 | WP_023108441.1 | hypothetical protein | - |
| PALA4_RS12995 (PALA4_02575) | 2750058..2750900 | - | 843 | WP_023108440.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| PALA4_RS13000 (PALA4_02576) | 2751051..2751404 | - | 354 | WP_023108439.1 | DUF3085 domain-containing protein | - |
| PALA4_RS13005 (PALA4_02577) | 2751528..2752352 | - | 825 | WP_023108438.1 | hypothetical protein | - |
| PALA4_RS13010 (PALA4_02578) | 2752641..2752919 | - | 279 | WP_023108437.1 | hypothetical protein | - |
| PALA4_RS13015 (PALA4_02579) | 2753016..2753753 | - | 738 | WP_023108436.1 | hypothetical protein | - |
| PALA4_RS13020 (PALA4_02580) | 2753837..2754523 | - | 687 | WP_023108435.1 | hypothetical protein | - |
| PALA4_RS13025 (PALA4_02581) | 2754705..2755097 | - | 393 | WP_023108434.1 | hypothetical protein | - |
| PALA4_RS13030 (PALA4_02582) | 2755119..2755340 | - | 222 | WP_003120032.1 | hypothetical protein | - |
| PALA4_RS13035 (PALA4_02583) | 2755674..2756231 | - | 558 | WP_023108433.1 | hypothetical protein | - |
| PALA4_RS13040 (PALA4_02585) | 2756475..2758086 | - | 1612 | Protein_2579 | DNA cytosine methyltransferase | - |
| PALA4_RS13045 (PALA4_02586) | 2758618..2760639 | - | 2022 | WP_023108431.1 | DNA topoisomerase III | - |
| PALA4_RS13050 (PALA4_02587) | 2760916..2761368 | - | 453 | WP_003120036.1 | single-stranded DNA-binding protein | - |
| PALA4_RS13055 (PALA4_02588) | 2761442..2761969 | - | 528 | WP_003090100.1 | DUF3158 family protein | - |
| PALA4_RS13060 (PALA4_02589) | 2761966..2762760 | - | 795 | WP_003090099.1 | TIGR03761 family integrating conjugative element protein | - |
| PALA4_RS13065 (PALA4_02590) | 2763191..2764423 | - | 1233 | WP_023113902.1 | STY4528 family pathogenicity island replication protein | - |
| PALA4_RS13070 (PALA4_02591) | 2764427..2764987 | - | 561 | WP_003090097.1 | DUF2857 domain-containing protein | - |
| PALA4_RS13075 (PALA4_02592) | 2765002..2766681 | - | 1680 | WP_023108429.1 | ParB family protein | - |
| PALA4_RS13080 (PALA4_02593) | 2766674..2766943 | - | 270 | WP_003050422.1 | hypothetical protein | - |
| PALA4_RS13085 (PALA4_02594) | 2766927..2767802 | - | 876 | WP_003090095.1 | Sporulation initiation inhibitor protein Soj | VF |
| PALA4_RS13090 (PALA4_02595) | 2767845..2768057 | - | 213 | WP_003090093.1 | AlpA family transcriptional regulator | - |
| PALA4_RS13095 (PALA4_02596) | 2768176..2768922 | - | 747 | WP_003120040.1 | hypothetical protein | - |
| PALA4_RS13100 (PALA4_02597) | 2769373..2769873 | + | 501 | WP_003098996.1 | DUF305 domain-containing protein | - |
| PALA4_RS13105 (PALA4_02598) | 2771011..2771871 | - | 861 | WP_224792188.1 | fimbrial protein | - |
| PALA4_RS13110 (PALA4_02599) | 2772703..2775681 | + | 2979 | WP_023443451.1 | transporter substrate-binding domain-containing protein | - |
| PALA4_RS13115 (PALA4_02600) | 2775772..2776305 | + | 534 | WP_003090076.1 | ProQ/FINO family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|