MGE detailed information
MGE type: Conjugative plasmid MGE length: 85007 bp
Accession: NZ_CP104849 Location: 1..85007 Organism: Escherichia coli strain DFK.1 Replicon: plasmid unnamed1
Accession: NZ_CP104849 Location: 1..85007 Organism: Escherichia coli strain DFK.1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7218_RS24835 (1539) | 1539..2284 | + | 746 | Protein_1 | conjugal transfer pilus acetylase TraX | - |
| N7218_RS24840 (2339) | 2339..2898 | + | 560 | Protein_2 | fertility inhibition protein FinO | - |
| N7218_RS24845 (3038) | 3038..3229 | + | 192 | Protein_3 | hypothetical protein | - |
| N7218_RS24850 (3836) | 3836..4277 | + | 442 | Protein_4 | transposase | - |
| N7218_RS24855 (4216) | 4216..4368 | + | 153 | WP_261628963.1 | IS66 family transposase ISEc23 | Transposase |
| N7218_RS24860 (4365) | 4365..4565 | + | 201 | WP_261628964.1 | IS66 family transposase ISEc23 | Transposase |
| N7218_RS24865 (4596) | 4596..4868 | + | 273 | WP_261628965.1 | IS66 family transposase ISEc23 | Transposase |
| N7218_RS24870 (4934) | 4934..5140 | + | 207 | WP_261628966.1 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| N7218_RS24875 (5214) | 5214..5336 | + | 123 | WP_261628967.1 | IS66 family transposase | - |
| N7218_RS24880 (5610) | 5610..6209 | + | 600 | WP_261628968.1 | IS66 family transposase ISEc23 | Transposase |
| N7218_RS24885 (6287) | 6287..6590 | + | 304 | Protein_11 | DUF2726 domain-containing protein | - |
| N7218_RS24890 (6644) | 6644..6778 | + | 135 | WP_023144756.1 | Hok/Gef family protein | - |
| N7218_RS24895 (7075) | 7075..7327 | + | 253 | Protein_13 | replication regulatory protein RepA | - |
| N7218_RS24900 (7433) | 7433..7564 | + | 132 | Protein_14 | protein CopA/IncA | - |
| N7218_RS24905 (7564) | 7564..7638 | + | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| N7218_RS24910 (7631) | 7631..8488 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| N7218_RS24915 (9428) | 9428..10081 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| N7218_RS24920 (10174) | 10174..10431 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| N7218_RS24925 (10364) | 10364..10765 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| N7218_RS24930 (11050) | 11050..12360 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| N7218_RS24935 (12389) | 12389..12487 | + | 99 | Protein_21 | IS1 family transposase | - |
| N7218_RS24940 (12637) | 12637..13497 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N7218_RS24945 (13796) | 13796..14500 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N7218_RS24950 (14567) | 14567..14947 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| N7218_RS24955 (14952) | 14952..15131 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| N7218_RS24960 (15159) | 15159..15437 | + | 279 | Protein_26 | pdcB | - |
| N7218_RS24965 (15442) | 15442..15855 | + | 414 | Protein_27 | IS3 family transposase ISLad1 | Transposase |
| N7218_RS24970 (15805) | 15805..16140 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7218_RS24975 (16350) | 16350..17330 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7218_RS24980 (17574) | 17574..18977 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7218_RS24985 (18964) | 18964..19896 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7218_RS24990 (20005) | 20005..20334 | - | 330 | Protein_32 | TOBE domain-containing protein | - |
| N7218_RS25000 (21195) | 21195..21353 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| N7218_RS25005 (21512) | 21512..22483 | - | 972 | Protein_35 | hypothetical protein | - |
| N7218_RS25010 (23239) | 23239..24216 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| N7218_RS25015 (24501) | 24501..25241 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| N7218_RS25020 (25362) | 25362..25550 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| N7218_RS25025 (25631) | 25631..26328 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| N7218_RS25030 (26344) | 26344..26673 | + | 330 | Protein_40 | TOBE domain-containing protein | - |
| N7218_RS25035 (26782) | 26782..27714 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7218_RS25040 (27701) | 27701..29104 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7218_RS25045 (29348) | 29348..30328 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7218_RS25050 (30538) | 30538..30873 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7218_RS25055 (30823) | 30823..31236 | - | 414 | Protein_45 | IS3 family transposase ISLad1 | Transposase |
| N7218_RS25060 (31241) | 31241..31519 | - | 279 | Protein_46 | pdcB | - |
| N7218_RS25065 (31547) | 31547..31726 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| N7218_RS25070 (31731) | 31731..32111 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N7218_RS25075 (32111) | 32111..32332 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N7218_RS25080 (32515) | 32515..32631 | + | 117 | Protein_50 | type I restriction endonuclease subunit M | - |
| N7218_RS25085 (32687) | 32687..33384 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N7218_RS25090 (33521) | 33521..34414 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| N7218_RS25095 (34457) | 34457..35452 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| N7218_RS25100 (36160) | 36160..36378 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N7218_RS25105 (36380) | 36380..36685 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N7218_RS25110 (36686) | 36686..37492 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| N7218_RS25115 (38266) | 38266..39021 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| N7218_RS25120 (39609) | 39609..40775 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| N7218_RS25125 (40775) | 40775..41746 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N7218_RS25130 (42613) | 42613..43515 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| N7218_RS25135 (43512) | 43512..43823 | + | 312 | WP_032143366.1 | hypothetical protein | - |
| N7218_RS25140 (43900) | 43900..44583 | + | 684 | WP_000086185.1 | DNA methylase | - |
| N7218_RS25145 (44584) | 44584..44805 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| N7218_RS25150 (44735) | 44735..45253 | + | 519 | WP_123325260.1 | DUF1380 family protein | - |
| N7218_RS25155 (45304) | 45304..46080 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| N7218_RS25160 (46497) | 46497..46922 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| N7218_RS25165 (46969) | 46969..47391 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| N7218_RS25170 (47388) | 47388..47579 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| N7218_RS25175 (48614) | 48614..48844 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| N7218_RS25180 (48896) | 48896..50257 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| N7218_RS25185 (50305) | 50305..50868 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| N7218_RS25190 (50894) | 50894..51124 | + | 231 | WP_021526513.1 | hypothetical protein | - |
| N7218_RS25195 (51019) | 51019..51294 | + | 276 | WP_071780182.1 | hypothetical protein | - |
| N7218_RS25200 (51287) | 51287..51622 | + | 336 | WP_013023883.1 | hypothetical protein | - |
| N7218_RS25205 (51535) | 51535..51741 | + | 207 | WP_000547975.1 | hypothetical protein | - |
| N7218_RS25210 (51767) | 51767..52306 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| N7218_RS25215 (52369) | 52369..52602 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| N7218_RS25220 (52668) | 52668..54626 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| N7218_RS25225 (54681) | 54681..55115 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| N7218_RS25230 (55112) | 55112..55874 | + | 763 | Protein_80 | plasmid SOS inhibition protein A | - |
| - (55843) | 55843..56029 | + | 187 | NuclAT_0 | - | - |
| - (55843) | 55843..56029 | + | 187 | NuclAT_0 | - | - |
| - (55843) | 55843..56029 | + | 187 | NuclAT_0 | - | - |
| - (55843) | 55843..56029 | + | 187 | NuclAT_0 | - | - |
| N7218_RS25235 (56077) | 56077..57446 | + | 1370 | WP_085947770.1 | IS3-like element IS150 family transposase | - |
| - (57473) | 57473..57513 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (57473) | 57473..57513 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (57473) | 57473..57513 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (57473) | 57473..57513 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| N7218_RS25240 (57499) | 57499..57648 | + | 150 | Protein_82 | plasmid maintenance protein Mok | - |
| N7218_RS25245 (57590) | 57590..57715 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| N7218_RS25250 (57935) | 57935..58165 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| N7218_RS25255 (58163) | 58163..58336 | - | 174 | Protein_85 | hypothetical protein | - |
| N7218_RS25260 (58406) | 58406..58612 | + | 207 | WP_024261895.1 | hypothetical protein | - |
| N7218_RS25265 (58637) | 58637..58924 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| N7218_RS25270 (59043) | 59043..59864 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| N7218_RS25275 (60161) | 60161..60763 | - | 603 | WP_260654181.1 | hypothetical protein | VF |
| N7218_RS25280 (61094) | 61094..61477 | + | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N7218_RS25285 (61611) | 61611..62288 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| N7218_RS25290 (62376) | 62376..62603 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| N7218_RS25295 (62637) | 62637..62999 | + | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| N7218_RS25300 (63004) | 63004..63315 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| N7218_RS25305 (63337) | 63337..63903 | + | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| N7218_RS25310 (63890) | 63890..64618 | + | 729 | WP_001230808.1 | type-F conjugative transfer system secretin TraK | - |
| N7218_RS25315 (64618) | 64618..66069 | + | 1452 | WP_000146687.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N7218_RS25320 (66059) | 66059..66625 | + | 567 | WP_001617877.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| N7218_RS25325 (66612) | 66612..66923 | + | 312 | WP_001057272.1 | conjugal transfer protein TrbD | - |
| N7218_RS25330 (66923) | 66923..67438 | + | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N7218_RS25335 (67573) | 67573..67794 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| N7218_RS25340 (67954) | 67954..70581 | + | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| N7218_RS25345 (70578) | 70578..70964 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| N7218_RS25350 (70961) | 70961..71593 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| N7218_RS25355 (71590) | 71590..72582 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| N7218_RS25360 (72612) | 72612..72917 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| N7218_RS25365 (72926) | 72926..73564 | + | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N7218_RS25370 (73561) | 73561..75411 | + | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N7218_RS25375 (75438) | 75438..75695 | + | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| N7218_RS25380 (75688) | 75688..76431 | + | 744 | WP_001030401.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N7218_RS25385 (76561) | 76561..77541 | + | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| N7218_RS25390 (77696) | 77696..78393 | + | 698 | WP_223216367.1 | IS1 family transposase | - |
| N7218_RS25395 (78403) | 78403..79074 | + | 672 | WP_260663770.1 | hypothetical protein | - |
| N7218_RS25400 (79071) | 79071..81260 | + | 2190 | WP_024946705.1 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|