MGE detailed information
MGE type: IScluster/Tn MGE length: 20748 bp
Accession: NZ_CP104847 Location: 11327..32074 Organism: Escherichia coli strain DFS.1 Replicon: plasmid unnamed1
Accession: NZ_CP104847 Location: 11327..32074 Organism: Escherichia coli strain DFS.1 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N7219_RS24250 (8119) | 8119..8679 | + | 561 | WP_261631931.1 | CPBP family intramembrane metalloprotease | - |
| N7219_RS24255 (8864) | 8864..9121 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| N7219_RS24260 (9054) | 9054..9455 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| N7219_RS24265 (9740) | 9740..11050 | + | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| N7219_RS24270 (11079) | 11079..11177 | + | 99 | Protein_17 | IS1 family transposase | - |
| N7219_RS24275 (11327) | 11327..12187 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N7219_RS24280 (12486) | 12486..13190 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N7219_RS24285 (13257) | 13257..13637 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| N7219_RS24290 (13642) | 13642..13821 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| N7219_RS24295 (13849) | 13849..14127 | + | 279 | Protein_22 | pdcB | - |
| N7219_RS24300 (14132) | 14132..14545 | + | 414 | Protein_23 | IS3 family transposase ISLad1 | Transposase |
| N7219_RS24305 (14495) | 14495..14830 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7219_RS24310 (15040) | 15040..16020 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7219_RS24315 (16264) | 16264..17667 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7219_RS24320 (17654) | 17654..18586 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7219_RS24325 (18695) | 18695..19024 | - | 330 | Protein_28 | TOBE domain-containing protein | - |
| N7219_RS24335 (19885) | 19885..20043 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| N7219_RS24340 (20202) | 20202..21173 | - | 972 | Protein_31 | hypothetical protein | - |
| N7219_RS24345 (21929) | 21929..22906 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| N7219_RS24350 (23191) | 23191..23931 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| N7219_RS24355 (24052) | 24052..24240 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| N7219_RS24360 (24321) | 24321..25018 | + | 698 | WP_223293341.1 | IS1 family transposase IS1R | Transposase |
| N7219_RS24365 (25034) | 25034..25363 | + | 330 | Protein_36 | TOBE domain-containing protein | - |
| N7219_RS24370 (25472) | 25472..26404 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| N7219_RS24375 (26391) | 26391..27794 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| N7219_RS24380 (28038) | 28038..29018 | + | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| N7219_RS24385 (29228) | 29228..29563 | + | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| N7219_RS24390 (29513) | 29513..29926 | - | 414 | Protein_41 | IS3 family transposase ISLad1 | Transposase |
| N7219_RS24395 (29931) | 29931..30209 | - | 279 | Protein_42 | pdcB | - |
| N7219_RS24400 (30237) | 30237..30416 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| N7219_RS24405 (30421) | 30421..30801 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| N7219_RS24410 (30801) | 30801..31022 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N7219_RS24415 (31205) | 31205..31321 | + | 117 | Protein_46 | type I restriction endonuclease subunit M | - |
| N7219_RS24420 (31377) | 31377..32074 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N7219_RS24425 (32211) | 32211..33104 | - | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| N7219_RS24430 (33147) | 33147..34142 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| N7219_RS24435 (34850) | 34850..35068 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N7219_RS24440 (35070) | 35070..35375 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N7219_RS24445 (35376) | 35376..36182 | + | 807 | WP_000016982.1 | site-specific integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|