MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89688 bp
Accession: NZ_CP104762 Location: 1028724..1118411 Organism: Enterococcus raffinosus strain ATCC 49464 Replicon: chromosome
Accession: NZ_CP104762 Location: 1028724..1118411 Organism: Enterococcus raffinosus strain ATCC 49464 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
N7K38_RS05185 (1023922) | 1023922..1024833 | + | 912 | WP_010746419.1 | Gfo/Idh/MocA family oxidoreductase | - |
N7K38_RS05190 (1024919) | 1024919..1025827 | + | 909 | WP_010746418.1 | UDP-N-acetylmuramate dehydrogenase | - |
N7K38_RS05195 (1025873) | 1025873..1026496 | - | 624 | WP_010746417.1 | ECF transporter S component | - |
N7K38_RS05200 (1026500) | 1026500..1027042 | - | 543 | WP_010746416.1 | phosphopantothenoylcysteine decarboxylase | - |
N7K38_RS05205 (1027039) | 1027039..1027764 | - | 726 | WP_010746415.1 | phosphopantothenate--cysteine ligase | - |
N7K38_RS05210 (1027761) | 1027761..1028756 | - | 996 | WP_010746414.1 | YhdH/YhfP family quinone oxidoreductase | - |
N7K38_RS05215 (1029257) | 1029257..1029799 | + | 543 | WP_010746413.1 | XRE family transcriptional regulator | - |
N7K38_RS05220 (1029821) | 1029821..1030909 | + | 1089 | WP_010746412.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
N7K38_RS05225 (1030925) | 1030925..1031734 | + | 810 | WP_010746411.1 | ABC transporter permease | - |
N7K38_RS05230 (1031731) | 1031731..1032576 | + | 846 | WP_010746410.1 | ABC transporter permease | - |
N7K38_RS05235 (1032573) | 1032573..1033643 | + | 1071 | WP_010746409.1 | ABC transporter substrate-binding protein | - |
N7K38_RS05240 (1034589) | 1034589..1034894 | + | 306 | WP_010746408.1 | hypothetical protein | - |
N7K38_RS05245 (1035843) | 1035843..1037081 | + | 1239 | WP_010746407.1 | replication initiator protein A | - |
N7K38_RS05250 (1037392) | 1037392..1037775 | + | 384 | WP_010746405.1 | hypothetical protein | - |
N7K38_RS05255 (1038506) | 1038506..1038907 | + | 402 | WP_010746404.1 | hypothetical protein | - |
N7K38_RS05260 (1038944) | 1038944..1039165 | + | 222 | WP_010746403.1 | hypothetical protein | - |
N7K38_RS05265 (1039307) | 1039307..1039750 | - | 444 | WP_010746402.1 | hypothetical protein | - |
N7K38_RS05270 (1039892) | 1039892..1040071 | + | 180 | WP_035016662.1 | hypothetical protein | - |
N7K38_RS05275 (1040061) | 1040061..1040909 | + | 849 | WP_010746401.1 | LysM peptidoglycan-binding domain-containing protein | - |
N7K38_RS05280 (1041006) | 1041006..1044473 | + | 3468 | WP_010746400.1 | SpaA isopeptide-forming pilin-related protein | - |
N7K38_RS05285 (1044543) | 1044543..1044893 | + | 351 | WP_010746399.1 | PrgU family protein | - |
N7K38_RS05290 (1044917) | 1044917..1045186 | + | 270 | WP_010746398.1 | hypothetical protein | - |
N7K38_RS05295 (1045192) | 1045192..1046103 | + | 912 | WP_010746397.1 | hypothetical protein | - |
N7K38_RS05300 (1046135) | 1046135..1046926 | + | 792 | WP_010746396.1 | LPXTG cell wall anchor domain-containing protein | - |
N7K38_RS05305 (1046945) | 1046945..1047109 | + | 165 | WP_010746395.1 | hypothetical protein | - |
N7K38_RS05310 (1047119) | 1047119..1048396 | + | 1278 | WP_010746394.1 | CHAP domain-containing protein | - |
N7K38_RS05315 (1048402) | 1048402..1049004 | + | 603 | WP_010746393.1 | hypothetical protein | - |
N7K38_RS05320 (1049069) | 1049069..1049380 | + | 312 | WP_035016678.1 | thioredoxin domain-containing protein | - |
N7K38_RS05325 (1049407) | 1049407..1049718 | + | 312 | WP_010746391.1 | hypothetical protein | - |
N7K38_RS05330 (1049711) | 1049711..1050730 | + | 1020 | WP_010746390.1 | conjugal transfer protein | - |
N7K38_RS05335 (1050720) | 1050720..1051049 | + | 330 | WP_231371797.1 | hypothetical protein | - |
N7K38_RS05340 (1050995) | 1050995..1051387 | + | 393 | WP_010746388.1 | TcpE family conjugal transfer membrane protein | - |
N7K38_RS05345 (1051397) | 1051397..1053889 | + | 2493 | WP_010746387.1 | ATP-binding protein | - |
N7K38_RS05350 (1054184) | 1054184..1054531 | + | 348 | WP_010746386.1 | hypothetical protein | - |
N7K38_RS05355 (1054543) | 1054543..1056903 | + | 2361 | WP_010746385.1 | hypothetical protein | - |
N7K38_RS05360 (1056890) | 1056890..1059169 | + | 2280 | WP_010746384.1 | TraM recognition domain-containing protein | - |
N7K38_RS05365 (1059660) | 1059660..1060454 | + | 795 | WP_010746383.1 | replication-relaxation family protein | - |
N7K38_RS05370 (1060451) | 1060451..1060765 | + | 315 | WP_010746382.1 | hypothetical protein | - |
N7K38_RS05375 (1061157) | 1061157..1061432 | + | 276 | WP_010746381.1 | hypothetical protein | - |
N7K38_RS05380 (1061456) | 1061456..1061791 | + | 336 | WP_010746380.1 | hypothetical protein | - |
N7K38_RS05385 (1061920) | 1061920..1062306 | + | 387 | WP_010746379.1 | hypothetical protein | - |
N7K38_RS05390 (1062381) | 1062381..1062845 | + | 465 | WP_010746378.1 | single-stranded DNA-binding protein | - |
- (1062875) | 1062875..1063128 | + | 254 | NuclAT_0 | - | Antitoxin Detail |
N7K38_RS05395 (1063065) | 1063065..1063208 | - | 144 | WP_010746377.1 | putative holin-like toxin | Toxin Detail |
N7K38_RS05400 (1063246) | 1063246..1063506 | - | 261 | WP_162531353.1 | hypothetical protein | - |
N7K38_RS05405 (1063550) | 1063550..1064062 | + | 513 | WP_010746376.1 | hypothetical protein | - |
N7K38_RS05410 (1064064) | 1064064..1064237 | + | 174 | WP_010746375.1 | hypothetical protein | - |
N7K38_RS05415 (1064234) | 1064234..1064731 | + | 498 | WP_010746374.1 | DnaJ domain-containing protein | - |
N7K38_RS05420 (1064842) | 1064842..1065060 | + | 219 | WP_010746373.1 | hypothetical protein | - |
N7K38_RS05425 (1065050) | 1065050..1065229 | + | 180 | WP_010746372.1 | hypothetical protein | - |
N7K38_RS05430 (1065245) | 1065245..1065433 | + | 189 | WP_010746371.1 | hypothetical protein | - |
N7K38_RS05435 (1065475) | 1065475..1066329 | + | 855 | WP_010746370.1 | DNA/RNA non-specific endonuclease | - |
N7K38_RS05440 (1066326) | 1066326..1066457 | + | 132 | WP_010746369.1 | hypothetical protein | - |
N7K38_RS05445 (1066521) | 1066521..1066769 | + | 249 | WP_000447966.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
N7K38_RS05450 (1066771) | 1066771..1067058 | + | 288 | WP_000179848.1 | Txe/YoeB family addiction module toxin | - |
N7K38_RS05455 (1067299) | 1067299..1067538 | + | 240 | WP_010746368.1 | BRCT domain-containing protein | - |
N7K38_RS05460 (1067773) | 1067773..1068018 | + | 246 | WP_010746367.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
N7K38_RS05465 (1068012) | 1068012..1068341 | + | 330 | Protein_1075 | type II toxin-antitoxin system PemK/MazF family toxin | - |
N7K38_RS05475 (1069919) | 1069919..1070122 | - | 204 | WP_071859008.1 | transposase | - |
N7K38_RS05480 (1070182) | 1070182..1070517 | - | 336 | WP_010746365.1 | ISL3 family transposase IS1476 | Transposase |
N7K38_RS05485 (1070523) | 1070523..1071032 | - | 510 | WP_249023767.1 | helix-turn-helix domain-containing protein | - |
N7K38_RS05490 (1071007) | 1071007..1071177 | - | 171 | WP_010746364.1 | hypothetical protein | - |
N7K38_RS05495 (1071339) | 1071339..1072622 | - | 1284 | Protein_1081 | ISL3 family transposase IS1251 | Transposase |
N7K38_RS05500 (1073211) | 1073211..1076234 | + | 3024 | WP_010746362.1 | hypothetical protein | VF |
N7K38_RS05505 (1076235) | 1076235..1077767 | + | 1533 | WP_010746361.1 | hypothetical protein | VF |
N7K38_RS05510 (1077784) | 1077784..1079685 | + | 1902 | WP_035016684.1 | hypothetical protein | VF |
N7K38_RS05515 (1079751) | 1079751..1080572 | + | 822 | Protein_1085 | hypothetical protein | VF |
N7K38_RS05520 (1080546) | 1080546..1080938 | + | 393 | WP_245176497.1 | hypothetical protein | VF |
N7K38_RS05525 (1081038) | 1081038..1081226 | + | 189 | WP_010746358.1 | CsbD family protein | - |
N7K38_RS05530 (1081315) | 1081315..1081425 | - | 111 | WP_231371798.1 | hypothetical protein | - |
N7K38_RS05535 (1081649) | 1081649..1081990 | - | 342 | WP_231371799.1 | ISL3 family transposase IS1476 | Transposase |
N7K38_RS05540 (1082011) | 1082011..1082211 | - | 201 | WP_231371800.1 | hypothetical protein | - |
N7K38_RS05545 (1082864) | 1082864..1084026 | + | 1163 | WP_095007062.1 | IS3 family transposase ISEfa8 | Transposase |
N7K38_RS05550 (1084438) | 1084438..1085712 | + | 1275 | WP_010746355.1 | DUF3440 domain-containing protein | - |
N7K38_RS05555 (1085696) | 1085696..1086214 | + | 519 | WP_010746354.1 | ParB N-terminal domain-containing protein | - |
N7K38_RS05560 (1087581) | 1087581..1087805 | - | 225 | WP_231371801.1 | hypothetical protein | - |
N7K38_RS05565 (1087821) | 1087821..1087985 | - | 165 | WP_231371802.1 | IS110 family transposase | - |
N7K38_RS05570 (1088512) | 1088512..1088775 | - | 264 | WP_010746353.1 | hypothetical protein | - |
N7K38_RS05575 (1089154) | 1089154..1089915 | + | 762 | WP_010746352.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
N7K38_RS05580 (1091290) | 1091290..1092066 | - | 777 | WP_010746350.1 | sulfite exporter TauE/SafE family protein | - |
N7K38_RS05585 (1092474) | 1092474..1093722 | + | 1249 | Protein_1099 | IS110 family transposase | - |
N7K38_RS05590 (1093832) | 1093832..1094953 | - | 1122 | WP_010746346.1 | SPASM domain-containing protein | - |
N7K38_RS05595 (1095048) | 1095048..1095752 | - | 705 | WP_010746345.1 | GntR family transcriptional regulator | - |
N7K38_RS05600 (1096195) | 1096195..1097973 | + | 1779 | WP_010746344.1 | beta-galactosidase | - |
N7K38_RS05605 (1097977) | 1097977..1098456 | + | 480 | WP_010746343.1 | PTS sugar transporter subunit IIB | - |
N7K38_RS05610 (1099004) | 1099004..1099816 | + | 813 | WP_174519990.1 | PTS sugar transporter subunit IIC | - |
N7K38_RS05615 (1099806) | 1099806..1100618 | + | 813 | WP_143139631.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
N7K38_RS05620 (1100682) | 1100682..1102145 | + | 1464 | WP_010746340.1 | hypothetical protein | VF |
N7K38_RS05625 (1102147) | 1102147..1102998 | + | 852 | WP_010746339.1 | Hercynine oxygenase | VF |
N7K38_RS05630 (1103581) | 1103581..1103853 | - | 273 | WP_010746338.1 | ISL3 family transposase IS1476 | Transposase |
N7K38_RS05635 (1105765) | 1105765..1107012 | + | 1248 | WP_010743568.1 | IS256 family transposase ISBsu2 | Transposase |
N7K38_RS05640 (1107250) | 1107250..1107630 | - | 381 | WP_010746337.1 | Tn3 family transposase TnpR_ISMex38 | Transposase |
N7K38_RS05645 (1107670) | 1107670..1107807 | - | 138 | WP_010746336.1 | recombinase family protein | - |
N7K38_RS05650 (1108544) | 1108544..1108804 | + | 261 | WP_010746335.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
N7K38_RS05655 (1108791) | 1108791..1109069 | + | 279 | WP_010746334.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
N7K38_RS05660 (1109351) | 1109351..1109485 | + | 135 | WP_010746332.1 | hypothetical protein | - |
N7K38_RS05665 (1109593) | 1109593..1110840 | - | 1248 | WP_010743568.1 | IS256 family transposase ISBsu2 | Transposase |
N7K38_RS05670 (1111087) | 1111087..1111434 | - | 348 | WP_010746331.1 | hypothetical protein | - |
N7K38_RS05675 (1111616) | 1111616..1111728 | + | 113 | Protein_1117 | replication initiator protein A | - |
N7K38_RS05680 (1111965) | 1111965..1112285 | + | 321 | WP_010746330.1 | DUF5839 family protein | - |
N7K38_RS05685 (1112625) | 1112625..1112819 | + | 195 | WP_010746329.1 | hypothetical protein | - |
N7K38_RS05690 (1112841) | 1112841..1113437 | + | 597 | Protein_1120 | hypothetical protein ; Integrase | Integrase |
N7K38_RS05695 (1113475) | 1113475..1113921 | + | 447 | WP_010746327.1 | ISLre2 family transposase ISBco6 | Transposase |
N7K38_RS05700 (1114854) | 1114854..1115282 | + | 429 | WP_010746326.1 | hypothetical protein | - |
N7K38_RS05705 (1115303) | 1115303..1115500 | + | 198 | WP_010746325.1 | hypothetical protein | - |
N7K38_RS05710 (1116767) | 1116767..1117735 | + | 969 | WP_010746324.1 | alpha/beta hydrolase | - |
N7K38_RS05715 (1117750) | 1117750..1118121 | + | 372 | WP_010746323.1 | EamA family transporter | - |
N7K38_RS05720 (1118114) | 1118114..1118461 | + | 348 | WP_010746322.1 | EamA family transporter | - |
N7K38_RS05725 (1118717) | 1118717..1118950 | - | 234 | WP_231371804.1 | tyrosine-type recombinase/integrase | - |
N7K38_RS05730 (1119634) | 1119634..1120356 | + | 723 | WP_010746321.1 | GntR family transcriptional regulator | - |
N7K38_RS05735 (1120368) | 1120368..1121540 | + | 1173 | WP_010746320.1 | SIS domain-containing protein | - |
N7K38_RS05740 (1121563) | 1121563..1122555 | + | 993 | WP_010746319.1 | tagatose-bisphosphate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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