NZ_CP1047621028724..1118411

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 89688 bp
Accession: NZ_CP104762        Location: 1028724..1118411         Organism: Enterococcus raffinosus strain ATCC 49464       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
N7K38_RS05185 (1023922) 1023922..1024833 + 912 WP_010746419.1 Gfo/Idh/MocA family oxidoreductase -
N7K38_RS05190 (1024919) 1024919..1025827 + 909 WP_010746418.1 UDP-N-acetylmuramate dehydrogenase -
N7K38_RS05195 (1025873) 1025873..1026496 - 624 WP_010746417.1 ECF transporter S component -
N7K38_RS05200 (1026500) 1026500..1027042 - 543 WP_010746416.1 phosphopantothenoylcysteine decarboxylase -
N7K38_RS05205 (1027039) 1027039..1027764 - 726 WP_010746415.1 phosphopantothenate--cysteine ligase -
N7K38_RS05210 (1027761) 1027761..1028756 - 996 WP_010746414.1 YhdH/YhfP family quinone oxidoreductase -
N7K38_RS05215 (1029257) 1029257..1029799 + 543 WP_010746413.1 XRE family transcriptional regulator -
N7K38_RS05220 (1029821) 1029821..1030909 + 1089 WP_010746412.1 Vitamin B12 import ATP-binding protein BtuD VF
N7K38_RS05225 (1030925) 1030925..1031734 + 810 WP_010746411.1 ABC transporter permease -
N7K38_RS05230 (1031731) 1031731..1032576 + 846 WP_010746410.1 ABC transporter permease -
N7K38_RS05235 (1032573) 1032573..1033643 + 1071 WP_010746409.1 ABC transporter substrate-binding protein -
N7K38_RS05240 (1034589) 1034589..1034894 + 306 WP_010746408.1 hypothetical protein -
N7K38_RS05245 (1035843) 1035843..1037081 + 1239 WP_010746407.1 replication initiator protein A -
N7K38_RS05250 (1037392) 1037392..1037775 + 384 WP_010746405.1 hypothetical protein -
N7K38_RS05255 (1038506) 1038506..1038907 + 402 WP_010746404.1 hypothetical protein -
N7K38_RS05260 (1038944) 1038944..1039165 + 222 WP_010746403.1 hypothetical protein -
N7K38_RS05265 (1039307) 1039307..1039750 - 444 WP_010746402.1 hypothetical protein -
N7K38_RS05270 (1039892) 1039892..1040071 + 180 WP_035016662.1 hypothetical protein -
N7K38_RS05275 (1040061) 1040061..1040909 + 849 WP_010746401.1 LysM peptidoglycan-binding domain-containing protein -
N7K38_RS05280 (1041006) 1041006..1044473 + 3468 WP_010746400.1 SpaA isopeptide-forming pilin-related protein -
N7K38_RS05285 (1044543) 1044543..1044893 + 351 WP_010746399.1 PrgU family protein -
N7K38_RS05290 (1044917) 1044917..1045186 + 270 WP_010746398.1 hypothetical protein -
N7K38_RS05295 (1045192) 1045192..1046103 + 912 WP_010746397.1 hypothetical protein -
N7K38_RS05300 (1046135) 1046135..1046926 + 792 WP_010746396.1 LPXTG cell wall anchor domain-containing protein -
N7K38_RS05305 (1046945) 1046945..1047109 + 165 WP_010746395.1 hypothetical protein -
N7K38_RS05310 (1047119) 1047119..1048396 + 1278 WP_010746394.1 CHAP domain-containing protein -
N7K38_RS05315 (1048402) 1048402..1049004 + 603 WP_010746393.1 hypothetical protein -
N7K38_RS05320 (1049069) 1049069..1049380 + 312 WP_035016678.1 thioredoxin domain-containing protein -
N7K38_RS05325 (1049407) 1049407..1049718 + 312 WP_010746391.1 hypothetical protein -
N7K38_RS05330 (1049711) 1049711..1050730 + 1020 WP_010746390.1 conjugal transfer protein -
N7K38_RS05335 (1050720) 1050720..1051049 + 330 WP_231371797.1 hypothetical protein -
N7K38_RS05340 (1050995) 1050995..1051387 + 393 WP_010746388.1 TcpE family conjugal transfer membrane protein -
N7K38_RS05345 (1051397) 1051397..1053889 + 2493 WP_010746387.1 ATP-binding protein -
N7K38_RS05350 (1054184) 1054184..1054531 + 348 WP_010746386.1 hypothetical protein -
N7K38_RS05355 (1054543) 1054543..1056903 + 2361 WP_010746385.1 hypothetical protein -
N7K38_RS05360 (1056890) 1056890..1059169 + 2280 WP_010746384.1 TraM recognition domain-containing protein -
N7K38_RS05365 (1059660) 1059660..1060454 + 795 WP_010746383.1 replication-relaxation family protein -
N7K38_RS05370 (1060451) 1060451..1060765 + 315 WP_010746382.1 hypothetical protein -
N7K38_RS05375 (1061157) 1061157..1061432 + 276 WP_010746381.1 hypothetical protein -
N7K38_RS05380 (1061456) 1061456..1061791 + 336 WP_010746380.1 hypothetical protein -
N7K38_RS05385 (1061920) 1061920..1062306 + 387 WP_010746379.1 hypothetical protein -
N7K38_RS05390 (1062381) 1062381..1062845 + 465 WP_010746378.1 single-stranded DNA-binding protein -
- (1062875) 1062875..1063128 + 254 NuclAT_0 - Antitoxin Detail
N7K38_RS05395 (1063065) 1063065..1063208 - 144 WP_010746377.1 putative holin-like toxin Toxin Detail
N7K38_RS05400 (1063246) 1063246..1063506 - 261 WP_162531353.1 hypothetical protein -
N7K38_RS05405 (1063550) 1063550..1064062 + 513 WP_010746376.1 hypothetical protein -
N7K38_RS05410 (1064064) 1064064..1064237 + 174 WP_010746375.1 hypothetical protein -
N7K38_RS05415 (1064234) 1064234..1064731 + 498 WP_010746374.1 DnaJ domain-containing protein -
N7K38_RS05420 (1064842) 1064842..1065060 + 219 WP_010746373.1 hypothetical protein -
N7K38_RS05425 (1065050) 1065050..1065229 + 180 WP_010746372.1 hypothetical protein -
N7K38_RS05430 (1065245) 1065245..1065433 + 189 WP_010746371.1 hypothetical protein -
N7K38_RS05435 (1065475) 1065475..1066329 + 855 WP_010746370.1 DNA/RNA non-specific endonuclease -
N7K38_RS05440 (1066326) 1066326..1066457 + 132 WP_010746369.1 hypothetical protein -
N7K38_RS05445 (1066521) 1066521..1066769 + 249 WP_000447966.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
N7K38_RS05450 (1066771) 1066771..1067058 + 288 WP_000179848.1 Txe/YoeB family addiction module toxin -
N7K38_RS05455 (1067299) 1067299..1067538 + 240 WP_010746368.1 BRCT domain-containing protein -
N7K38_RS05460 (1067773) 1067773..1068018 + 246 WP_010746367.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein -
N7K38_RS05465 (1068012) 1068012..1068341 + 330 Protein_1075 type II toxin-antitoxin system PemK/MazF family toxin -
N7K38_RS05475 (1069919) 1069919..1070122 - 204 WP_071859008.1 transposase -
N7K38_RS05480 (1070182) 1070182..1070517 - 336 WP_010746365.1 ISL3 family transposase IS1476 Transposase
N7K38_RS05485 (1070523) 1070523..1071032 - 510 WP_249023767.1 helix-turn-helix domain-containing protein -
N7K38_RS05490 (1071007) 1071007..1071177 - 171 WP_010746364.1 hypothetical protein -
N7K38_RS05495 (1071339) 1071339..1072622 - 1284 Protein_1081 ISL3 family transposase IS1251 Transposase
N7K38_RS05500 (1073211) 1073211..1076234 + 3024 WP_010746362.1 hypothetical protein VF
N7K38_RS05505 (1076235) 1076235..1077767 + 1533 WP_010746361.1 hypothetical protein VF
N7K38_RS05510 (1077784) 1077784..1079685 + 1902 WP_035016684.1 hypothetical protein VF
N7K38_RS05515 (1079751) 1079751..1080572 + 822 Protein_1085 hypothetical protein VF
N7K38_RS05520 (1080546) 1080546..1080938 + 393 WP_245176497.1 hypothetical protein VF
N7K38_RS05525 (1081038) 1081038..1081226 + 189 WP_010746358.1 CsbD family protein -
N7K38_RS05530 (1081315) 1081315..1081425 - 111 WP_231371798.1 hypothetical protein -
N7K38_RS05535 (1081649) 1081649..1081990 - 342 WP_231371799.1 ISL3 family transposase IS1476 Transposase
N7K38_RS05540 (1082011) 1082011..1082211 - 201 WP_231371800.1 hypothetical protein -
N7K38_RS05545 (1082864) 1082864..1084026 + 1163 WP_095007062.1 IS3 family transposase ISEfa8 Transposase
N7K38_RS05550 (1084438) 1084438..1085712 + 1275 WP_010746355.1 DUF3440 domain-containing protein -
N7K38_RS05555 (1085696) 1085696..1086214 + 519 WP_010746354.1 ParB N-terminal domain-containing protein -
N7K38_RS05560 (1087581) 1087581..1087805 - 225 WP_231371801.1 hypothetical protein -
N7K38_RS05565 (1087821) 1087821..1087985 - 165 WP_231371802.1 IS110 family transposase -
N7K38_RS05570 (1088512) 1088512..1088775 - 264 WP_010746353.1 hypothetical protein -
N7K38_RS05575 (1089154) 1089154..1089915 + 762 WP_010746352.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
N7K38_RS05580 (1091290) 1091290..1092066 - 777 WP_010746350.1 sulfite exporter TauE/SafE family protein -
N7K38_RS05585 (1092474) 1092474..1093722 + 1249 Protein_1099 IS110 family transposase -
N7K38_RS05590 (1093832) 1093832..1094953 - 1122 WP_010746346.1 SPASM domain-containing protein -
N7K38_RS05595 (1095048) 1095048..1095752 - 705 WP_010746345.1 GntR family transcriptional regulator -
N7K38_RS05600 (1096195) 1096195..1097973 + 1779 WP_010746344.1 beta-galactosidase -
N7K38_RS05605 (1097977) 1097977..1098456 + 480 WP_010746343.1 PTS sugar transporter subunit IIB -
N7K38_RS05610 (1099004) 1099004..1099816 + 813 WP_174519990.1 PTS sugar transporter subunit IIC -
N7K38_RS05615 (1099806) 1099806..1100618 + 813 WP_143139631.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
N7K38_RS05620 (1100682) 1100682..1102145 + 1464 WP_010746340.1 hypothetical protein VF
N7K38_RS05625 (1102147) 1102147..1102998 + 852 WP_010746339.1 Hercynine oxygenase VF
N7K38_RS05630 (1103581) 1103581..1103853 - 273 WP_010746338.1 ISL3 family transposase IS1476 Transposase
N7K38_RS05635 (1105765) 1105765..1107012 + 1248 WP_010743568.1 IS256 family transposase ISBsu2 Transposase
N7K38_RS05640 (1107250) 1107250..1107630 - 381 WP_010746337.1 Tn3 family transposase TnpR_ISMex38 Transposase
N7K38_RS05645 (1107670) 1107670..1107807 - 138 WP_010746336.1 recombinase family protein -
N7K38_RS05650 (1108544) 1108544..1108804 + 261 WP_010746335.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
N7K38_RS05655 (1108791) 1108791..1109069 + 279 WP_010746334.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
N7K38_RS05660 (1109351) 1109351..1109485 + 135 WP_010746332.1 hypothetical protein -
N7K38_RS05665 (1109593) 1109593..1110840 - 1248 WP_010743568.1 IS256 family transposase ISBsu2 Transposase
N7K38_RS05670 (1111087) 1111087..1111434 - 348 WP_010746331.1 hypothetical protein -
N7K38_RS05675 (1111616) 1111616..1111728 + 113 Protein_1117 replication initiator protein A -
N7K38_RS05680 (1111965) 1111965..1112285 + 321 WP_010746330.1 DUF5839 family protein -
N7K38_RS05685 (1112625) 1112625..1112819 + 195 WP_010746329.1 hypothetical protein -
N7K38_RS05690 (1112841) 1112841..1113437 + 597 Protein_1120 hypothetical protein ; Integrase Integrase
N7K38_RS05695 (1113475) 1113475..1113921 + 447 WP_010746327.1 ISLre2 family transposase ISBco6 Transposase
N7K38_RS05700 (1114854) 1114854..1115282 + 429 WP_010746326.1 hypothetical protein -
N7K38_RS05705 (1115303) 1115303..1115500 + 198 WP_010746325.1 hypothetical protein -
N7K38_RS05710 (1116767) 1116767..1117735 + 969 WP_010746324.1 alpha/beta hydrolase -
N7K38_RS05715 (1117750) 1117750..1118121 + 372 WP_010746323.1 EamA family transporter -
N7K38_RS05720 (1118114) 1118114..1118461 + 348 WP_010746322.1 EamA family transporter -
N7K38_RS05725 (1118717) 1118717..1118950 - 234 WP_231371804.1 tyrosine-type recombinase/integrase -
N7K38_RS05730 (1119634) 1119634..1120356 + 723 WP_010746321.1 GntR family transcriptional regulator -
N7K38_RS05735 (1120368) 1120368..1121540 + 1173 WP_010746320.1 SIS domain-containing protein -
N7K38_RS05740 (1121563) 1121563..1122555 + 993 WP_010746319.1 tagatose-bisphosphate aldolase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance