MGE detailed information
MGE type: IS/Tn MGE length: 585 bp
Accession: NZ_CP104747 Location: 23824..24408 Organism: Erwinia pyrifoliae strain CP20113301 Replicon: plasmid unnamed2
Accession: NZ_CP104747 Location: 23824..24408 Organism: Erwinia pyrifoliae strain CP20113301 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYP80_RS19540 (NYP80_19540) | 19052..19336 | - | 285 | WP_011078079.1 | VF530 family DNA-binding protein | - |
| NYP80_RS19545 (NYP80_19545) | 19496..19783 | - | 288 | WP_011078058.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NYP80_RS19550 (NYP80_19550) | 19773..20027 | - | 255 | WP_011078059.1 | plasmid stabilization protein | Antitoxin Detail |
| NYP80_RS19555 (NYP80_19555) | 20238..21203 | - | 966 | WP_011078060.1 | ThiF family adenylyltransferase | - |
| NYP80_RS19560 (NYP80_19560) | 21219..21977 | - | 759 | WP_012814638.1 | thiazole synthase | - |
| NYP80_RS19565 (NYP80_19565) | 21981..22178 | - | 198 | WP_012814637.1 | sulfur carrier protein ThiS | - |
| NYP80_RS19570 (NYP80_19570) | 22175..23107 | - | 933 | WP_041473952.1 | FAD-dependent oxidoreductase | - |
| NYP80_RS19575 (NYP80_19575) | 23483..23644 | - | 162 | Protein_27 | Txe/YoeB family addiction module toxin | - |
| NYP80_RS19580 (NYP80_19580) | 23824..24408 | + | 585 | WP_012814636.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| NYP80_RS19585 (NYP80_19585) | 24735..25394 | + | 660 | WP_041473951.1 | class I SAM-dependent methyltransferase | - |
| NYP80_RS19590 (NYP80_19590) | 25779..27809 | - | 2031 | WP_011114006.1 | choline transporter | - |
| NYP80_RS19595 (NYP80_19595) | 28222..28391 | + | 170 | Protein_31 | Rpn family recombination-promoting nuclease/putative transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Erwinia pyrifoliae Ep1/96 | IS/Tn | TA6130 | NC_004445 | 17120..17704 | 0.001 |