MGE detailed information
MGE type: IScluster/Tn MGE length: 23596 bp
Accession: NZ_CP104683 Location: 18717..42312 Organism: Escherichia coli strain 2022CK-00450 Replicon: plasmid unnamed2
Accession: NZ_CP104683 Location: 18717..42312 Organism: Escherichia coli strain 2022CK-00450 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5922_RS25195 (N5922_25190) | 14063..14854 | + | 792 | WP_001325019.1 | ABC transporter ATP-binding protein | - |
| N5922_RS25200 (N5922_25195) | 14856..15794 | + | 939 | WP_000449980.1 | MlaD family protein | - |
| N5922_RS25205 (N5922_25200) | 15794..16435 | + | 642 | WP_000948259.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| N5922_RS25210 (N5922_25205) | 16783..18060 | + | 1278 | WP_001515737.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| N5922_RS25215 (N5922_25210) | 18142..18660 | + | 519 | Protein_18 | PLP-dependent aspartate aminotransferase family protein | - |
| N5922_RS25220 (N5922_25215) | 18717..19414 | + | 698 | WP_223335778.1 | IS1 family transposase IS1X2 | Transposase |
| N5922_RS25225 (N5922_25220) | 19424..20506 | + | 1083 | WP_032140505.1 | lytic murein transglycosylase B | - |
| N5922_RS25230 (N5922_25225) | 20614..21471 | - | 858 | Protein_21 | APC family permease | - |
| N5922_RS25235 (N5922_25230) | 21524..22228 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25240 (N5922_25235) | 22293..22754 | + | 462 | Protein_23 | lactate utilization protein C | - |
| N5922_RS25245 (N5922_25240) | 22804..23184 | - | 381 | Protein_24 | gluconate permease | - |
| N5922_RS25250 (N5922_25245) | 23395..23706 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| N5922_RS25255 (N5922_25250) | 23703..24122 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| N5922_RS25265 (N5922_25260) | 25566..25766 | - | 201 | Protein_28 | hypothetical protein | - |
| N5922_RS25270 (N5922_25265) | 25928..26278 | + | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| N5922_RS25275 (N5922_25270) | 26583..27059 | - | 477 | WP_000043177.1 | DNA protection during starvation protein | VF |
| N5922_RS25280 (N5922_25275) | 27183..28130 | - | 948 | Protein_31 | Tn3 family transposase ISEc63 | Transposase |
| N5922_RS25285 (N5922_25280) | 28196..28900 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25290 (N5922_25285) | 29284..29775 | + | 492 | WP_004206662.1 | hypothetical protein | - |
| N5922_RS25295 (N5922_25290) | 29836..30039 | + | 204 | WP_004213596.1 | HHA domain-containing protein | - |
| N5922_RS25300 (N5922_25295) | 30053..30274 | + | 222 | WP_016237028.1 | hypothetical protein | - |
| N5922_RS25305 (N5922_25300) | 30296..31135 | + | 840 | Protein_36 | IS5 family transposase IS903B | Transposase |
| N5922_RS25310 (N5922_25305) | 31135..31440 | + | 306 | Protein_37 | IS481 family transposase ISKpn28 | Transposase |
| N5922_RS25315 (N5922_25310) | 31391..31783 | - | 393 | Protein_38 | transposase | - |
| N5922_RS25320 (N5922_25315) | 32482..32742 | + | 261 | WP_004026352.1 | hypothetical protein | - |
| N5922_RS25325 (N5922_25320) | 32852..33322 | - | 471 | WP_004026354.1 | RES family NAD+ phosphorylase | Toxin Detail |
| N5922_RS25330 (N5922_25325) | 33319..33762 | - | 444 | WP_004181895.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| N5922_RS25335 (N5922_25330) | 33863..35134 | - | 1272 | WP_004181894.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| N5922_RS25340 (N5922_25335) | 35134..35502 | - | 369 | WP_042014650.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5922_RS25345 (N5922_25340) | 35595..36575 | - | 981 | WP_103284490.1 | IS5 family transposase ISKpn26 | Transposase |
| N5922_RS25350 (N5922_25345) | 36601..37563 | + | 963 | WP_261588837.1 | IS5 family transposase IS903B | Transposase |
| N5922_RS25355 (N5922_25350) | 37789..38486 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N5922_RS25360 (N5922_25355) | 38641..39459 | - | 819 | WP_042014904.1 | phospholipase D family protein | - |
| N5922_RS25365 (N5922_25360) | 39569..40063 | - | 495 | WP_042014906.1 | thermonuclease family protein | - |
| N5922_RS25370 (N5922_25365) | 40246..41517 | + | 1272 | WP_038992356.1 | DUF1173 family protein | - |
| N5922_RS25375 (N5922_25370) | 41608..42312 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25380 (N5922_25375) | 42517..43431 | + | 915 | WP_023277424.1 | TnsD family Tn7-like transposition protein | - |
| N5922_RS25385 (N5922_25380) | 43466..45046 | + | 1581 | WP_000881617.1 | Tn7-like element transposition protein TnsE | - |
| N5922_RS25390 (N5922_25385) | 45138..45236 | + | 99 | Protein_53 | ATP-binding protein | - |
| N5922_RS25395 (N5922_25390) | 45530..45682 | - | 153 | Protein_54 | transposase domain-containing protein | - |
| N5922_RS25400 (N5922_25395) | 45639..45902 | - | 264 | WP_001446199.1 | transposase | - |
| N5922_RS25405 (N5922_25400) | 45917..46180 | + | 264 | WP_001446200.1 | hypothetical protein | - |
| N5922_RS25410 (N5922_25405) | 46408..46689 | + | 282 | WP_000127020.1 | helix-turn-helix domain-containing protein | - |
| N5922_RS25415 (N5922_25410) | 46725..47294 | + | 570 | WP_000350432.1 | Hsp20/alpha crystallin family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|