MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 122304 bp
Accession: NZ_CP104683 Location: 1..122304 Organism: Escherichia coli strain 2022CK-00450 Replicon: plasmid unnamed2
Accession: NZ_CP104683 Location: 1..122304 Organism: Escherichia coli strain 2022CK-00450 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5922_RS25125 (N5922_25120) | 1..1011 | + | 1011 | WP_000200071.1 | RepB family plasmid replication initiator protein | - |
| N5922_RS25130 (N5922_25125) | 1728..2468 | - | 741 | WP_001515717.1 | tyrosine-type recombinase/integrase | - |
| N5922_RS25135 (N5922_25130) | 2800..3130 | - | 331 | Protein_2 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5922_RS25140 (N5922_25135) | 3117..3423 | - | 307 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| N5922_RS25145 (N5922_25140) | 3500..4197 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| N5922_RS25150 (N5922_25145) | 4581..5585 | - | 1005 | WP_000851062.1 | LacI family DNA-binding transcriptional regulator | - |
| N5922_RS25155 (N5922_25150) | 5615..7015 | - | 1401 | WP_001515710.1 | sucrose-6-phosphate hydrolase | - |
| N5922_RS25160 (N5922_25155) | 7015..8385 | - | 1371 | WP_000345204.1 | sucrose-specific PTS transporter subunit IIBC | - |
| N5922_RS25165 (N5922_25160) | 8523..10040 | - | 1518 | WP_000488917.1 | carbohydrate porin | - |
| N5922_RS25170 (N5922_25165) | 10206..11129 | - | 924 | WP_000992320.1 | aminoimidazole riboside kinase | - |
| N5922_RS25175 (N5922_25170) | 11484..11732 | + | 249 | Protein_10 | IS3 family transposase ISEhe3 | Transposase |
| N5922_RS25180 (N5922_25175) | 11784..12488 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25185 (N5922_25180) | 12547..12798 | + | 252 | WP_001515736.1 | hypothetical protein | - |
| N5922_RS25190 (N5922_25185) | 12912..14057 | + | 1146 | WP_001325018.1 | ABC transporter permease | - |
| N5922_RS25195 (N5922_25190) | 14063..14854 | + | 792 | WP_001325019.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| N5922_RS25200 (N5922_25195) | 14856..15794 | + | 939 | WP_000449980.1 | MlaD family protein | - |
| N5922_RS25205 (N5922_25200) | 15794..16435 | + | 642 | WP_000948259.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| N5922_RS25210 (N5922_25205) | 16783..18060 | + | 1278 | WP_001515737.1 | L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha | - |
| N5922_RS25215 (N5922_25210) | 18142..18660 | + | 519 | Protein_18 | PLP-dependent aspartate aminotransferase family protein | - |
| N5922_RS25220 (N5922_25215) | 18717..19414 | + | 698 | WP_223335778.1 | IS1 family transposase IS1X2 | Transposase |
| N5922_RS25225 (N5922_25220) | 19424..20506 | + | 1083 | WP_032140505.1 | lytic murein transglycosylase B | - |
| N5922_RS25230 (N5922_25225) | 20614..21471 | - | 858 | Protein_21 | APC family permease | - |
| N5922_RS25235 (N5922_25230) | 21524..22228 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25240 (N5922_25235) | 22293..22754 | + | 462 | Protein_23 | lactate utilization protein C | - |
| N5922_RS25245 (N5922_25240) | 22804..23184 | - | 381 | Protein_24 | gluconate permease | - |
| N5922_RS25250 (N5922_25245) | 23395..23706 | + | 312 | WP_000558568.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| N5922_RS25255 (N5922_25250) | 23703..24122 | + | 420 | WP_000990392.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| N5922_RS25265 (N5922_25260) | 25566..25766 | - | 201 | Protein_28 | hypothetical protein | - |
| N5922_RS25270 (N5922_25265) | 25928..26278 | + | 351 | WP_000928911.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| N5922_RS25275 (N5922_25270) | 26583..27059 | - | 477 | WP_000043177.1 | DNA protection during starvation protein | VF |
| N5922_RS25280 (N5922_25275) | 27183..28130 | - | 948 | Protein_31 | Tn3 family transposase ISEc63 | Transposase |
| N5922_RS25285 (N5922_25280) | 28196..28900 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25290 (N5922_25285) | 29284..29775 | + | 492 | WP_004206662.1 | hypothetical protein | - |
| N5922_RS25295 (N5922_25290) | 29836..30039 | + | 204 | WP_004213596.1 | HHA domain-containing protein | - |
| N5922_RS25300 (N5922_25295) | 30053..30274 | + | 222 | WP_016237028.1 | hypothetical protein | - |
| N5922_RS25305 (N5922_25300) | 30296..31135 | + | 840 | Protein_36 | IS5 family transposase IS903B | Transposase |
| N5922_RS25310 (N5922_25305) | 31135..31440 | + | 306 | Protein_37 | IS481 family transposase ISKpn28 | Transposase |
| N5922_RS25315 (N5922_25310) | 31391..31783 | - | 393 | Protein_38 | transposase | - |
| N5922_RS25320 (N5922_25315) | 32482..32742 | + | 261 | WP_004026352.1 | hypothetical protein | - |
| N5922_RS25325 (N5922_25320) | 32852..33322 | - | 471 | WP_004026354.1 | RES family NAD+ phosphorylase | Toxin Detail |
| N5922_RS25330 (N5922_25325) | 33319..33762 | - | 444 | WP_004181895.1 | DUF2384 domain-containing protein | Antitoxin Detail |
| N5922_RS25335 (N5922_25330) | 33863..35134 | - | 1272 | WP_004181894.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| N5922_RS25340 (N5922_25335) | 35134..35502 | - | 369 | WP_042014650.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5922_RS25345 (N5922_25340) | 35595..36575 | - | 981 | WP_103284490.1 | IS5 family transposase ISKpn26 | Transposase |
| N5922_RS25350 (N5922_25345) | 36601..37563 | + | 963 | WP_261588837.1 | IS5 family transposase IS903B | Transposase |
| N5922_RS25355 (N5922_25350) | 37789..38486 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| N5922_RS25360 (N5922_25355) | 38641..39459 | - | 819 | WP_042014904.1 | phospholipase D family protein | - |
| N5922_RS25365 (N5922_25360) | 39569..40063 | - | 495 | WP_042014906.1 | thermonuclease family protein | - |
| N5922_RS25370 (N5922_25365) | 40246..41517 | + | 1272 | WP_038992356.1 | DUF1173 family protein | - |
| N5922_RS25375 (N5922_25370) | 41608..42312 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25380 (N5922_25375) | 42517..43431 | + | 915 | WP_023277424.1 | TnsD family Tn7-like transposition protein | - |
| N5922_RS25385 (N5922_25380) | 43466..45046 | + | 1581 | WP_000881617.1 | Tn7-like element transposition protein TnsE | - |
| N5922_RS25390 (N5922_25385) | 45138..45236 | + | 99 | Protein_53 | ATP-binding protein | - |
| N5922_RS25395 (N5922_25390) | 45530..45682 | - | 153 | Protein_54 | transposase domain-containing protein | - |
| N5922_RS25400 (N5922_25395) | 45639..45902 | - | 264 | WP_001446199.1 | IS66 family transposase ISPpu19 | Transposase |
| N5922_RS25405 (N5922_25400) | 45917..46180 | + | 264 | WP_001446200.1 | hypothetical protein | - |
| N5922_RS25410 (N5922_25405) | 46408..46689 | + | 282 | WP_000127020.1 | helix-turn-helix domain-containing protein | - |
| N5922_RS25415 (N5922_25410) | 46725..47294 | + | 570 | WP_000350432.1 | Small heat shock protein IbpA | VF |
| N5922_RS25420 (N5922_25415) | 47392..50241 | + | 2850 | WP_000101609.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| N5922_RS25425 (N5922_25420) | 50258..51688 | + | 1431 | WP_023205563.1 | cardiolipin synthase | - |
| N5922_RS25430 (N5922_25425) | 51716..53545 | + | 1830 | WP_021567664.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| N5922_RS25435 (N5922_25430) | 53624..54082 | + | 459 | WP_023205562.1 | hypothetical protein | VF |
| N5922_RS25440 (N5922_25435) | 54104..55012 | + | 909 | WP_021567662.1 | heat resistance protein YfdX1 | - |
| N5922_RS25445 (N5922_25440) | 55115..56002 | + | 888 | WP_016239829.1 | heat resistance protein YfdX2 | - |
| N5922_RS25450 (N5922_25445) | 56099..56710 | + | 612 | WP_001090783.1 | heat resistance membrane protein HdeD-GI | - |
| N5922_RS25455 (N5922_25450) | 56790..57935 | + | 1146 | WP_001166993.1 | hypothetical protein | - |
| N5922_RS25460 (N5922_25455) | 57925..58365 | + | 441 | WP_000786814.1 | heat resistance system thioredoxin Trx-GI | - |
| N5922_RS25465 (N5922_25460) | 58369..60084 | + | 1716 | WP_023063510.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| N5922_RS25470 (N5922_25465) | 60081..60578 | + | 498 | WP_016239752.1 | heat resistance protein PsiE-GI | - |
| N5922_RS25475 (N5922_25470) | 60556..61521 | + | 966 | WP_001721693.1 | zinc metalloprotease HtpX | - |
| N5922_RS25480 (N5922_25475) | 61546..62697 | + | 1152 | WP_016156528.1 | hypothetical protein | VF |
| N5922_RS25485 (N5922_25480) | 62922..63311 | - | 390 | Protein_72 | IS5 family transposase ISThi1 | Transposase |
| N5922_RS25490 (N5922_25485) | 63692..64396 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25495 (N5922_25490) | 64448..64630 | + | 183 | Protein_74 | IS5 family transposase IS5D | Transposase |
| N5922_RS25500 (N5922_25495) | 64888..65745 | - | 858 | WP_001445939.1 | RNA polymerase sigma factor RpoH | - |
| N5922_RS25505 (N5922_25500) | 65843..66811 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| N5922_RS25510 (N5922_25505) | 67012..67709 | + | 698 | WP_225858622.1 | IS1 family transposase IS1X2 | Transposase |
| N5922_RS25515 (N5922_25510) | 67725..67808 | + | 84 | Protein_78 | hypothetical protein | - |
| N5922_RS25520 (N5922_25515) | 67868..68467 | - | 600 | Protein_79 | IS6 family transposase IS15DI | Transposase |
| N5922_RS25525 (N5922_25520) | 68536..69318 | - | 783 | WP_032140521.1 | IS21 family transposase ISSen3 | Transposase |
| N5922_RS25530 (N5922_25525) | 69315..70337 | - | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| N5922_RS25535 (N5922_25530) | 70423..70533 | - | 111 | Protein_82 | IS6 family transposase IS15DII | Transposase |
| N5922_RS25540 (N5922_25535) | 70914..71069 | + | 156 | WP_000075580.1 | hypothetical protein | - |
| N5922_RS25545 (N5922_25540) | 71118..72110 | + | 993 | WP_001145103.1 | hypothetical protein | - |
| N5922_RS25550 (N5922_25545) | 72167..72297 | + | 131 | Protein_85 | ISNCY family transposase | - |
| N5922_RS25555 (N5922_25550) | 72294..72908 | - | 615 | WP_001445935.1 | DUF2913 family protein | - |
| N5922_RS25560 (N5922_25555) | 72962..73243 | - | 282 | WP_001261568.1 | hypothetical protein | - |
| N5922_RS25565 | 73262..73393 | + | 132 | WP_001326845.1 | hypothetical protein | - |
| N5922_RS25570 (N5922_25560) | 73425..73751 | + | 327 | WP_004201125.1 | C2H2-type zinc finger protein | - |
| N5922_RS25575 (N5922_25565) | 74232..75227 | + | 996 | WP_000484486.1 | IS110 family transposase IS1663 | Transposase |
| N5922_RS25580 (N5922_25570) | 75399..76706 | - | 1308 | WP_000149431.1 | McrC family protein | - |
| N5922_RS25585 (N5922_25575) | 76703..78859 | - | 2157 | WP_000895052.1 | AAA family ATPase | - |
| N5922_RS25590 (N5922_25580) | 79273..80805 | + | 1533 | Protein_93 | IS3 family transposase ISKpn38 | Transposase |
| N5922_RS25595 (N5922_25585) | 80943..81347 | - | 405 | WP_001515732.1 | ISNCY family transposase ISKpn21 | Transposase |
| N5922_RS25600 (N5922_25590) | 81514..82218 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25605 (N5922_25595) | 82273..82842 | - | 570 | Protein_96 | IS5 family transposase ISKpn26 | Transposase |
| N5922_RS25610 (N5922_25600) | 83120..83401 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| N5922_RS25615 (N5922_25605) | 83382..83711 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5922_RS25620 (N5922_25610) | 84757..84960 | - | 204 | Protein_99 | IS110 family transposase | - |
| N5922_RS25625 (N5922_25615) | 85014..85718 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5922_RS25630 (N5922_25620) | 85783..86013 | + | 231 | Protein_101 | IS5/IS1182 family transposase | - |
| N5922_RS25640 (N5922_25630) | 87041..87442 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| N5922_RS25645 (N5922_25635) | 87375..87632 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| N5922_RS25650 (N5922_25640) | 87725..88378 | - | 654 | WP_000616806.1 | CPBP family intramembrane metalloprotease | - |
| N5922_RS25655 (N5922_25645) | 89316..90173 | - | 858 | Protein_106 | incFII family plasmid replication initiator RepA | - |
| N5922_RS25660 (N5922_25650) | 90166..90240 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| N5922_RS25665 (N5922_25655) | 90475..90732 | - | 258 | WP_000083825.1 | replication regulatory protein RepA | - |
| N5922_RS25670 (N5922_25660) | 90972..91550 | - | 579 | WP_032142246.1 | DUF2726 domain-containing protein | - |
| N5922_RS25675 (N5922_25665) | 91583..92280 | + | 698 | WP_223584563.1 | IS1 family transposase IS1R | Transposase |
| N5922_RS25680 (N5922_25670) | 92297..93040 | + | 744 | Protein_111 | RNA 3'-terminal phosphate cyclase | - |
| N5922_RS25685 (N5922_25675) | 93083..95788 | - | 2706 | WP_016239750.1 | HTH-type transcriptional regulator MalT | VF |
| N5922_RS25690 (N5922_25680) | 96117..96814 | + | 698 | WP_223419864.1 | IS1 family transposase IS1R | Transposase |
| N5922_RS25695 (N5922_25685) | 96967..99099 | - | 2133 | WP_001192442.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| N5922_RS25700 (N5922_25690) | 99101..100450 | - | 1350 | WP_001549868.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| N5922_RS25705 (N5922_25695) | 100447..101328 | - | 882 | WP_001549866.1 | efflux RND transporter periplasmic adaptor subunit | - |
| N5922_RS25710 (N5922_25700) | 101343..103262 | - | 1920 | WP_000989158.1 | TolC family protein | - |
| N5922_RS25715 (N5922_25705) | 103339..116712 | - | 13374 | WP_088765934.1 | Ig-like domain-containing protein | - |
| N5922_RS25720 (N5922_25710) | 117260..118240 | + | 981 | WP_016236480.1 | IS5 family transposase ISKpn26 | Transposase |
| N5922_RS25725 (N5922_25715) | 119416..120387 | - | 972 | WP_000817039.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N5922_RS25730 (N5922_25720) | 120387..121553 | - | 1167 | WP_000523813.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|