MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92729 bp
Accession: NZ_CP104640 Location: 1..92729 Organism: Escherichia coli strain PNUSAE014970 Replicon: plasmid unnamed1
Accession: NZ_CP104640 Location: 1..92729 Organism: Escherichia coli strain PNUSAE014970 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4555_RS26955 (499) | 499..1476 | + | 978 | WP_000776550.1 | hypothetical protein | VF |
| N4555_RS26960 (1410) | 1410..2687 | + | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| N4555_RS26965 (2674) | 2674..3186 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| N4555_RS26970 (3361) | 3361..4077 | + | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| N4555_RS26975 (4169) | 4169..4570 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| N4555_RS26980 (4749) | 4749..5920 | + | 1172 | WP_085949322.1 | IS3 family transposase ISLad1 | Transposase |
| N4555_RS26985 (6461) | 6461..6976 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| N4555_RS26990 (6978) | 6978..9974 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| N4555_RS26995 (10024) | 10024..12144 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| N4555_RS27000 (12148) | 12148..13587 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| N4555_RS27005 (13654) | 13654..13848 | + | 195 | WP_001303402.1 | hypothetical protein | VF |
| N4555_RS27010 (13878) | 13878..14162 | + | 285 | WP_001358890.1 | hypothetical protein | VF |
| N4555_RS27015 (14331) | 14331..14561 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| N4555_RS27020 (14682) | 14682..15422 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| N4555_RS27025 (15707) | 15707..16684 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| N4555_RS27030 (17092) | 17092..17292 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| N4555_RS27035 (17289) | 17289..17909 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| N4555_RS27040 (17906) | 17906..18589 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| N4555_RS27045 (19048) | 19048..19266 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N4555_RS27050 (19268) | 19268..19573 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N4555_RS27055 (19574) | 19574..20380 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| N4555_RS27065 (22278) | 22278..22616 | + | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| N4555_RS27070 (23204) | 23204..24370 | + | 1167 | WP_000772446.1 | hypothetical protein | VF |
| N4555_RS27075 (24370) | 24370..25341 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| N4555_RS27080 (26641) | 26641..28365 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| N4555_RS27085 (28442) | 28442..29344 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| N4555_RS27090 (29348) | 29348..29653 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| N4555_RS27095 (29730) | 29730..30413 | + | 684 | WP_000085945.1 | DNA methylase | - |
| N4555_RS27100 (30414) | 30414..30635 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| N4555_RS27105 (30529) | 30529..31083 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| N4555_RS27110 (31129) | 31129..31905 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| N4555_RS27115 (32323) | 32323..32748 | + | 426 | WP_001198930.1 | antirestriction protein | - |
| N4555_RS27120 (32795) | 32795..33217 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| N4555_RS27125 (33214) | 33214..33405 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| N4555_RS27130 (33375) | 33375..33884 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| N4555_RS27135 (34401) | 34401..34631 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| N4555_RS27140 (34683) | 34683..36044 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| N4555_RS27145 (36091) | 36091..36654 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| N4555_RS27150 (36740) | 36740..37189 | - | 450 | WP_001451816.1 | hypothetical protein | - |
| N4555_RS27155 (37259) | 37259..37465 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| N4555_RS27160 (37491) | 37491..37943 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| N4555_RS27165 (38000) | 38000..38233 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| N4555_RS27170 (38299) | 38299..40257 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| N4555_RS27175 (40312) | 40312..40746 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| N4555_RS27180 (40743) | 40743..41504 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - (41473) | 41473..41671 | + | 199 | NuclAT_0 | - | - |
| - (41473) | 41473..41671 | + | 199 | NuclAT_0 | - | - |
| - (41473) | 41473..41671 | + | 199 | NuclAT_0 | - | - |
| - (41473) | 41473..41671 | + | 199 | NuclAT_0 | - | - |
| N4555_RS27185 (41678) | 41678..41827 | + | 150 | Protein_47 | FlmC family protein | - |
| N4555_RS27190 (41769) | 41769..41894 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| N4555_RS27195 (42028) | 42028..44049 | + | 2022 | Protein_49 | hypothetical protein | Relaxase |
| N4555_RS27200 (44117) | 44117..44548 | + | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| N4555_RS27205 (45227) | 45227..45576 | - | 350 | Protein_51 | IS3 family transposase IS3H | Transposase |
| N4555_RS27210 (45670) | 45670..45933 | + | 264 | Protein_52 | IS21 family transposase ISEc62 | Transposase |
| N4555_RS27215 (45973) | 45973..46093 | + | 121 | Protein_53 | IS21 family transposase ISEc62 | Transposase |
| N4555_RS27220 (46090) | 46090..46242 | + | 153 | Protein_54 | IS1 family transposase | - |
| N4555_RS27225 (46349) | 46349..55858 | + | 9510 | WP_000581721.1 | hypothetical protein | VF |
| N4555_RS27230 (55932) | 55932..56156 | + | 225 | Protein_56 | IS3 family transposase IS3H | Transposase |
| N4555_RS27235 (56149) | 56149..56394 | - | 246 | Protein_57 | IS3 family transposase IS1203 | Transposase |
| N4555_RS27240 (56401) | 56401..56652 | - | 252 | Protein_58 | IS3 family transposase IS1203 | Transposase |
| N4555_RS27245 (56709) | 56709..58097 | + | 1389 | Protein_59 | Multifunctional conjugation protein TraI | Relaxase |
| N4555_RS27250 (58117) | 58117..58863 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| N4555_RS27255 (58922) | 58922..59782 | + | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| N4555_RS27260 (59885) | 59885..60445 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| N4555_RS27265 (60578) | 60578..60790 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| N4555_RS27270 (61035) | 61035..61496 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| N4555_RS27275 (61542) | 61542..61751 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| N4555_RS27280 (61789) | 61789..62127 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| N4555_RS27285 (62367) | 62367..62621 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| N4555_RS27290 (62857) | 62857..62931 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| N4555_RS27295 (62924) | 62924..63781 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| N4555_RS27300 (64693) | 64693..64977 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| N4555_RS27305 (64977) | 64977..65252 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N4555_RS27310 (65347) | 65347..65553 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| N4555_RS27315 (65653) | 65653..65868 | - | 216 | Protein_73 | transposase | - |
| N4555_RS27320 (65912) | 65912..66478 | - | 567 | Protein_74 | IS3 family transposase ISSd1 | Transposase |
| N4555_RS27325 (66478) | 66478..66894 | - | 417 | Protein_75 | IS91 family transposase | - |
| N4555_RS27330 (66894) | 66894..67079 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| N4555_RS27335 (67256) | 67256..69466 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| N4555_RS27340 (69510) | 69510..69899 | + | 390 | WP_001172748.1 | cytochrome b562 | - |
| N4555_RS27345 (69956) | 69956..70943 | + | 988 | Protein_79 | IS3 family transposase IS629 | Transposase |
| N4555_RS27350 (71124) | 71124..75026 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| N4555_RS27355 (75282) | 75282..75763 | - | 482 | Protein_81 | IS1 family transposase IS1N | Transposase |
| N4555_RS27360 (77205) | 77205..78026 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| N4555_RS27365 (78026) | 78026..79132 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| N4555_RS27370 (79222) | 79222..80943 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| N4555_RS27375 (81017) | 81017..82015 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| N4555_RS27380 (82068) | 82068..82256 | + | 189 | Protein_86 | hypothetical protein | - |
| N4555_RS27385 (82360) | 82360..82446 | - | 87 | Protein_87 | IS3 family transposase ISEhe3 | Transposase |
| N4555_RS27390 (82903) | 82903..85599 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| N4555_RS27395 (85686) | 85686..86561 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| N4555_RS27400 (86562) | 86562..88529 | + | 1968 | WP_001302177.1 | Secretin PulD | VF |
| N4555_RS27405 (88529) | 88529..90034 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| N4555_RS27410 (90036) | 90036..91259 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| N4555_RS27415 (91290) | 91290..91724 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| N4555_RS27420 (91721) | 91721..92275 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| N4555_RS27425 (92290) | 92290..92637 | + | 348 | WP_000173396.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|