MGE detailed information
MGE type: Genomic_island MGE length: 10154 bp
Accession: NZ_CP104639 Location: 1338373..1348526 Organism: Escherichia coli strain PNUSAE014970 Replicon: chromosome
Accession: NZ_CP104639 Location: 1338373..1348526 Organism: Escherichia coli strain PNUSAE014970 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4555_RS06560 (1333571) | 1333571..1334779 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| N4555_RS06565 (1334805) | 1334805..1336136 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| N4555_RS06570 (1336158) | 1336158..1337147 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| N4555_RS06575 (1337246) | 1337246..1338184 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| N4555_RS06580 (1338499) | 1338499..1338717 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| N4555_RS06585 (1338973) | 1338973..1339512 | + | 540 | WP_000675739.1 | protein YhaB | - |
| N4555_RS06590 (1339534) | 1339534..1340721 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| N4555_RS06600 (1341350) | 1341350..1342495 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| N4555_RS06605 (1342592) | 1342592..1343482 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| N4555_RS06610 (1343512) | 1343512..1344282 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| N4555_RS06615 (1344298) | 1344298..1345632 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| N4555_RS06620 (1346007) | 1346007..1347578 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| N4555_RS06625 (1347727) | 1347727..1348062 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| N4555_RS06630 (1348062) | 1348062..1348526 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| N4555_RS06635 (1348581) | 1348581..1349390 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| N4555_RS06640 (1349639) | 1349639..1350919 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| N4555_RS06645 (1350942) | 1350942..1351415 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| N4555_RS06650 (1351426) | 1351426..1352205 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| N4555_RS06655 (1352195) | 1352195..1353073 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| N4555_RS06660 (1353091) | 1353091..1353525 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |