MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP104629 Location: 4357699..4367050 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Accession: NZ_CP104629 Location: 4357699..4367050 Organism: Escherichia coli strain AHM21C2872I Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5855_RS20835 (4354430) | 4354430..4355149 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| N5855_RS20840 (4355146) | 4355146..4356777 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| N5855_RS20845 (4356958) | 4356958..4357188 | + | 231 | WP_021557455.1 | 4Fe-4S mono-cluster protein YjdI | - |
| N5855_RS20850 (4357200) | 4357200..4357472 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| N5855_RS20855 (4357699) | 4357699..4357995 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| N5855_RS20860 (4358023) | 4358023..4358196 | + | 174 | WP_001672275.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| N5855_RS20865 (4358315) | 4358315..4359832 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| N5855_RS20870 (4360069) | 4360069..4361526 | - | 1458 | WP_021557456.1 | dipeptide/tripeptide permease DtpC | - |
| N5855_RS20875 (4361585) | 4361585..4363732 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| N5855_RS20880 (4363812) | 4363812..4365146 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| N5855_RS20885 (4365512) | 4365512..4367050 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| N5855_RS20895 (4367849) | 4367849..4368424 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| N5855_RS20900 (4368461) | 4368461..4370158 | - | 1698 | WP_021557457.1 | protein-disulfide reductase DsbD | - |
| N5855_RS20905 (4370134) | 4370134..4370472 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| N5855_RS20910 (4370588) | 4370588..4371889 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |