MGE detailed information
MGE type: Conjugative plasmid MGE length: 89710 bp
Accession: NZ_CP104620 Location: 1..89710 Organism: Escherichia coli strain AHM9C68I Replicon: plasmid pHNAH968-1
Accession: NZ_CP104620 Location: 1..89710 Organism: Escherichia coli strain AHM9C68I Replicon: plasmid pHNAH968-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5859_RS23340 () | 1..858 | + | 858 | WP_000130988.1 | incFII family plasmid replication initiator RepA | - |
| N5859_RS23345 () | 1560..1751 | + | 192 | WP_072656942.1 | hypothetical protein | - |
| N5859_RS23350 () | 1824..2075 | + | 252 | WP_106693621.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N5859_RS23355 () | 2072..2359 | + | 288 | WP_249578050.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5859_RS23360 () | 2529..2933 | + | 405 | WP_000154256.1 | DUF2251 domain-containing protein | - |
| N5859_RS23365 () | 3088..3468 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| N5859_RS23370 () | 3465..3730 | + | 266 | Protein_6 | IS66 family transposase ISEc8 | Transposase |
| N5859_RS23375 () | 3861..5399 | + | 1539 | WP_106693623.1 | IS66 family transposase ISEc8 | Transposase |
| N5859_RS23380 () | 5511..5846 | - | 336 | WP_021531026.1 | colicin E1 family microcin immunity protein | - |
| N5859_RS23385 () | 5975..6322 | + | 348 | WP_000142443.1 | DUF6404 family protein | - |
| N5859_RS23390 () | 6340..6930 | - | 591 | WP_045133249.1 | hypothetical protein | - |
| N5859_RS23395 () | 7139..7573 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| N5859_RS23400 () | 7570..7920 | + | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| N5859_RS23405 () | 7951..9564 | + | 1614 | WP_000080172.1 | IS66 family transposase ISEc43 | Transposase |
| N5859_RS23410 () | 9862..10209 | + | 348 | WP_072657006.1 | hypothetical protein | VF |
| N5859_RS23415 () | 10509..10745 | + | 237 | WP_247843941.1 | hypothetical protein | - |
| N5859_RS23420 () | 10781..14458 | + | 3678 | WP_072657008.1 | hypothetical protein | VF |
| N5859_RS23425 () | 14757..15182 | + | 426 | WP_000422722.1 | IS66 family transposase ISEc23 | Transposase |
| N5859_RS23430 () | 15179..15529 | + | 351 | WP_072657009.1 | IS66 family transposase ISEc47 | Transposase |
| N5859_RS23435 () | 15605..15985 | + | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| N5859_RS23440 () | 15982..16247 | + | 266 | Protein_20 | IS66 family transposase ISEc8 | Transposase |
| N5859_RS23445 () | 16378..17916 | + | 1539 | WP_284632942.1 | IS66 family transposase ISEc8 | Transposase |
| N5859_RS23450 () | 18085..19313 | + | 1229 | WP_166738926.1 | IS3 family transposase | - |
| N5859_RS23455 () | 19760..20212 | + | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| N5859_RS23460 () | 20322..20777 | - | 456 | WP_045133248.1 | IS200-IS605 family transposase IS200C | Transposase |
| N5859_RS23465 () | 20995..21477 | - | 483 | WP_066019395.1 | hypothetical protein | - |
| N5859_RS23470 () | 21970..22392 | - | 423 | WP_045133246.1 | Protein AggB | VF |
| N5859_RS23475 () | 22409..24967 | - | 2559 | WP_283247477.1 | F1 capsule-anchoring protein | VF |
| N5859_RS23480 () | 25095..25850 | - | 756 | WP_024198451.1 | Chaperone protein caf1M | VF |
| N5859_RS23485 () | 26039..26248 | - | 210 | WP_000929752.1 | PapB/FocB family fimbrial expression transcriptional regulator | - |
| N5859_RS23490 () | 26699..27282 | + | 584 | Protein_30 | IS1 family transposase | - |
| N5859_RS23495 () | 27293..27484 | - | 192 | WP_001515192.1 | hypothetical protein | - |
| N5859_RS23500 () | 27493..27828 | - | 336 | WP_001039462.1 | plasmid stabilization protein StbA | - |
| N5859_RS23505 () | 28487..28777 | + | 291 | WP_001471781.1 | hypothetical protein | - |
| N5859_RS23510 () | 28944..29684 | - | 741 | Protein_34 | IS5 family transposase IS903B | Transposase |
| N5859_RS23520 () | 30922..31611 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| N5859_RS23525 () | 31608..32396 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| N5859_RS23530 () | 32576..33220 | + | 645 | WP_001144036.1 | ParA family protein | - |
| N5859_RS23535 () | 33307..33615 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| N5859_RS23540 () | 34029..35009 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| N5859_RS23545 () | 35002..35418 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| N5859_RS23550 () | 35420..36694 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| N5859_RS23555 () | 36694..37131 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5859_RS23560 () | 37128..37376 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| N5859_RS23565 () | 37793..38695 | + | 903 | WP_077872020.1 | DUF1281 domain-containing protein | - |
| N5859_RS23570 () | 38692..39003 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| N5859_RS23575 () | 39079..39762 | + | 684 | WP_001474699.1 | DNA methylase | - |
| N5859_RS23580 () | 39763..39984 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| N5859_RS23585 () | 39998..40432 | + | 435 | WP_072657021.1 | DUF1380 family protein | - |
| N5859_RS23590 () | 40477..41247 | + | 771 | WP_021532679.1 | hypothetical protein | - |
| N5859_RS23595 () | 41660..42085 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| N5859_RS23600 () | 42132..42554 | + | 423 | WP_072657022.1 | DUF1380 family protein | - |
| N5859_RS23605 () | 42551..42742 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| N5859_RS23610 () | 42956..43111 | + | 156 | WP_001744062.1 | hypothetical protein | - |
| N5859_RS23615 () | 43780..44010 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| N5859_RS23620 () | 44062..45423 | + | 1362 | WP_240750878.1 | DUF3560 domain-containing protein | - |
| N5859_RS23625 () | 45471..46034 | + | 564 | WP_001330829.1 | class I SAM-dependent methyltransferase | - |
| N5859_RS23630 () | 46186..46413 | + | 228 | WP_071594011.1 | hypothetical protein | - |
| N5859_RS23635 () | 46654..46860 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| N5859_RS23640 () | 46886..47425 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| N5859_RS23645 () | 47487..47720 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| N5859_RS23650 () | 47785..49743 | + | 1959 | WP_284632911.1 | ParB/RepB/Spo0J family partition protein | - |
| N5859_RS23655 () | 49798..50232 | + | 435 | WP_000845930.1 | conjugation system SOS inhibitor PsiB | - |
| N5859_RS23660 () | 50229..50991 | + | 763 | Protein_64 | plasmid SOS inhibition protein A | - |
| N5859_RS23665 () | 50960..51148 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 50960..51184 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50960..51184 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50960..51184 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 50960..51184 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - | 51117..51182 | - | 66 | - | - | Antitoxin Detail |
| N5859_RS23670 () | 51170..51319 | + | 150 | Protein_66 | plasmid maintenance protein Mok | - |
| N5859_RS23675 () | 51261..51386 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| N5859_RS23680 () | 51606..51836 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| N5859_RS23685 () | 51834..52007 | - | 174 | Protein_69 | hypothetical protein | - |
| N5859_RS23690 () | 52077..52283 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| N5859_RS23695 () | 52308..52595 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| N5859_RS23700 () | 52715..53536 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| N5859_RS23705 () | 53833..54480 | - | 648 | WP_137531447.1 | hypothetical protein | VF |
| N5859_RS23710 () | 54757..55140 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N5859_RS23715 () | 55331..56017 | + | 687 | WP_001825184.1 | PAS domain-containing protein | - |
| N5859_RS23720 () | 56111..56338 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| N5859_RS23725 () | 56372..56731 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| N5859_RS23730 () | 56746..57057 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| N5859_RS23735 () | 57079..57645 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| N5859_RS23740 () | 57632..58360 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| N5859_RS23745 () | 58360..59787 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| N5859_RS23750 () | 59777..60349 | + | 573 | WP_024179131.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| N5859_RS23755 () | 60346..60666 | + | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| N5859_RS23760 () | 60659..60910 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| N5859_RS23765 () | 60907..61422 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| N5859_RS23770 () | 61557..61778 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| N5859_RS23775 () | 61938..64565 | + | 2628 | WP_001064243.1 | type IV secretion system protein TraC | - |
| N5859_RS23780 () | 64562..64948 | + | 387 | WP_029400173.1 | type-F conjugative transfer system protein TrbI | - |
| N5859_RS23785 () | 64945..65577 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| N5859_RS23790 () | 65574..66566 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| N5859_RS23795 () | 66592..67053 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| N5859_RS23800 () | 67083..67535 | + | 453 | WP_000069427.1 | hypothetical protein | - |
| N5859_RS23805 () | 67563..68201 | + | 639 | WP_001104086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| N5859_RS23810 () | 68198..70006 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| N5859_RS23815 () | 70033..70290 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| N5859_RS23820 () | 70283..71026 | + | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| N5859_RS23825 () | 71042..71389 | + | 348 | WP_072656932.1 | conjugal transfer protein TrbA | - |
| N5859_RS23830 () | 71508..71792 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N5859_RS23835 () | 71779..72324 | + | 546 | WP_000060037.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| N5859_RS23840 () | 72254..72616 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| N5859_RS23845 () | 72616..73989 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| N5859_RS23850 () | 73986..76811 | + | 2826 | WP_072656933.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| N5859_RS23855 () | 76808..77317 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| N5859_RS23860 () | 77331..78062 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| N5859_RS23865 () | 78315..80513 | + | 2199 | WP_072656934.1 | type IV conjugative transfer system coupling protein TraD | - |
| N5859_RS23870 () | 80513..85783 | + | 5271 | WP_284632922.1 | Multifunctional conjugation protein TraI | Relaxase |
| N5859_RS23875 () | 85803..86546 | + | 744 | WP_000205704.1 | conjugal transfer pilus acetylase TraX | - |
| N5859_RS23880 () | 86601..87161 | + | 561 | WP_024184455.1 | fertility inhibition protein FinO | - |
| N5859_RS23885 () | 87297..87503 | + | 207 | WP_072656937.1 | ANR family transcriptional regulator | - |
| N5859_RS23890 () | 87893..88492 | + | 600 | WP_072656938.1 | PIN domain-containing protein | - |
| N5859_RS23895 () | 89151..89405 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| N5859_RS23900 () | 89512..89698 | + | 187 | Protein_112 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|