MGE detailed information
MGE type: Mobilizable plasmid MGE length: 95335 bp
Accession: NZ_CP104615 Location: 1..95335 Organism: Escherichia coli strain AHM8C212RI Replicon: plasmid pHNAH8212R
Accession: NZ_CP104615 Location: 1..95335 Organism: Escherichia coli strain AHM8C212RI Replicon: plasmid pHNAH8212R
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5856_RS24350 (N5856_24280) | 414..1628 | + | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| N5856_RS24355 (N5856_24285) | 1656..1961 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N5856_RS24360 (N5856_24290) | 2073..2261 | + | 189 | Protein_3 | IS91 family transposase | - |
| N5856_RS24365 (N5856_24295) | 2228..3427 | - | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| N5856_RS24370 (N5856_24300) | 3533..4183 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N5856_RS24375 (N5856_24305) | 4215..4457 | - | 243 | WP_000844627.1 | transposase | - |
| N5856_RS24380 (N5856_24310) | 4763..5599 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| N5856_RS24385 (N5856_24315) | 5599..6402 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N5856_RS24390 (N5856_24320) | 6463..7278 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| N5856_RS24395 (N5856_24325) | 7608..7694 | + | 87 | Protein_10 | Arm DNA-binding domain-containing protein | - |
| N5856_RS24400 (N5856_24330) | 7966..8721 | - | 756 | Protein_11 | IS110 family transposase IS5075 | Transposase |
| N5856_RS24405 (N5856_24335) | 8774..9478 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24410 (N5856_24340) | 9544..11058 | + | 1515 | Protein_13 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N5856_RS24415 (N5856_24345) | 11091..11324 | - | 234 | Protein_14 | transposase | - |
| N5856_RS24420 (N5856_24350) | 11906..12292 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| N5856_RS24425 (N5856_24355) | 12432..13400 | - | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| N5856_RS24430 (N5856_24360) | 14803..15111 | - | 309 | Protein_17 | replication initiation protein | - |
| N5856_RS24440 (N5856_24370) | 16006..16185 | + | 180 | Protein_19 | IS91 family transposase | - |
| N5856_RS24445 (N5856_24375) | 16300..17808 | - | 1509 | Protein_20 | group II intron reverse transcriptase/maturase | - |
| N5856_RS24450 (N5856_24380) | 18214..18645 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5856_RS24455 (N5856_24385) | 18645..19916 | + | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| N5856_RS24460 (N5856_24390) | 19998..20972 | - | 975 | WP_000064119.1 | ParB family protein | - |
| N5856_RS24465 (N5856_24395) | 20972..22177 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| N5856_RS24470 (N5856_24400) | 22592..22861 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| N5856_RS24475 (N5856_24405) | 23037..23903 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| N5856_RS24480 (N5856_24410) | 24433..24537 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| N5856_RS24485 (N5856_24415) | 24666..24923 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| N5856_RS24490 (N5856_24420) | 24981..25757 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| N5856_RS24495 (N5856_24425) | 25754..26497 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| N5856_RS24500 (N5856_24430) | 26548..26898 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| N5856_RS24505 (N5856_24435) | 27450..28538 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| N5856_RS24510 (N5856_24440) | 28540..30672 | + | 2133 | WP_284632466.1 | P-loop NTPase fold protein | - |
| N5856_RS24515 (N5856_24445) | 30699..31721 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| N5856_RS24520 (N5856_24450) | 31718..32500 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| N5856_RS24525 (N5856_24455) | 32539..32724 | + | 186 | WP_284632464.1 | hypothetical protein | - |
| N5856_RS24530 (N5856_24460) | 32774..33673 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| N5856_RS24535 (N5856_24465) | 33663..33953 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| N5856_RS24540 (N5856_24470) | 34249..34479 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5856_RS24545 (N5856_24475) | 34476..34892 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5856_RS24550 (N5856_24480) | 35054..37192 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| N5856_RS24555 (N5856_24485) | 37546..37803 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| N5856_RS24560 (N5856_24490) | 37803..38393 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| N5856_RS24565 (N5856_24495) | 38656..40212 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| N5856_RS24570 (N5856_24500) | 40404..41021 | + | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| N5856_RS24575 (N5856_24505) | 41314..42351 | - | 1038 | WP_044502555.1 | permease | - |
| N5856_RS24580 (N5856_24510) | 42456..42779 | + | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| N5856_RS24585 (N5856_24515) | 42978..43682 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24590 (N5856_24520) | 43688..44416 | + | 729 | WP_152921961.1 | replication initiation protein | - |
| N5856_RS24595 (N5856_24525) | 45010..46446 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| N5856_RS24600 (N5856_24530) | 46713..47417 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24605 (N5856_24535) | 47539..48444 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| N5856_RS24610 (N5856_24540) | 48441..49679 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| N5856_RS24615 (N5856_24545) | 49679..50263 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| N5856_RS24620 (N5856_24550) | 50756..51520 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| N5856_RS24625 (N5856_24555) | 51661..52365 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N5856_RS24630 (N5856_24560) | 52670..53845 | + | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| N5856_RS24635 (N5856_24565) | 53869..57021 | + | 3153 | WP_000347934.1 | multidrug efflux RND transporter permease subunit OqxB3 | VF |
| N5856_RS24640 (N5856_24570) | 57091..57570 | - | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| N5856_RS24645 (N5856_24575) | 57672..58376 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24650 (N5856_24580) | 58426..58662 | - | 237 | Protein_61 | hypothetical protein | - |
| N5856_RS24655 (N5856_24585) | 58683..59477 | - | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N5856_RS24660 (N5856_24590) | 59506..60936 | - | 1431 | Protein_63 | IS4 family transposase IS50R | Transposase |
| N5856_RS24665 (N5856_24595) | 61056..61244 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| N5856_RS24670 (N5856_24600) | 61254..62453 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| N5856_RS24675 (N5856_24605) | 62619..62711 | + | 93 | Protein_66 | IS6 family transposase | - |
| N5856_RS24680 (N5856_24610) | 62950..63231 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5856_RS24685 (N5856_24615) | 63221..63472 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| N5856_RS24690 (N5856_24620) | 64663..65502 | + | 840 | WP_024129959.1 | replication initiation protein | - |
| N5856_RS24695 (N5856_24625) | 65523..66365 | + | 843 | WP_000435064.1 | replication initiation protein | - |
| N5856_RS24700 (N5856_24630) | 66369..66815 | + | 447 | WP_001074384.1 | hypothetical protein | - |
| N5856_RS24705 (N5856_24635) | 66952..67305 | + | 354 | WP_024129958.1 | DNA distortion polypeptide 3 | - |
| N5856_RS24710 (N5856_24640) | 67844..68908 | - | 1065 | WP_012291478.1 | ParA family protein | - |
| N5856_RS24715 (N5856_24645) | 69332..69562 | - | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| N5856_RS24720 (N5856_24650) | 69614..70234 | - | 621 | WP_000864788.1 | ParA family protein | - |
| N5856_RS24725 (N5856_24655) | 70529..71173 | + | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N5856_RS24730 (N5856_24660) | 71289..71468 | - | 180 | WP_000347021.1 | hypothetical protein | - |
| N5856_RS24735 | 71535..71630 | - | 96 | WP_000609146.1 | DinQ-like type I toxin DqlB | - |
| N5856_RS24740 | 72191..72274 | - | 84 | WP_272056275.1 | DinQ-like type I toxin DqlB | - |
| N5856_RS24745 (N5856_24665) | 72766..72975 | - | 210 | Protein_80 | IS1 family transposase | - |
| N5856_RS24750 (N5856_24670) | 73040..73744 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24755 (N5856_24675) | 73797..74453 | - | 657 | Protein_82 | IS91 family transposase ISAzo26 | Transposase |
| N5856_RS24760 (N5856_24680) | 74598..75095 | + | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| N5856_RS24765 (N5856_24685) | 75207..75497 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| N5856_RS24770 (N5856_24690) | 75503..76341 | + | 839 | Protein_85 | Streptomycin 3''-adenylyltransferase | ARG |
| N5856_RS24775 (N5856_24695) | 76458..76805 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| N5856_RS24780 (N5856_24700) | 76799..77638 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| N5856_RS24785 (N5856_24705) | 78043..79584 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| N5856_RS24790 (N5856_24710) | 79897..80271 | + | 375 | Protein_89 | protein-disulfide reductase DsbD family protein | - |
| N5856_RS24795 (N5856_24715) | 80371..80928 | + | 558 | Protein_90 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| N5856_RS24800 (N5856_24720) | 80939..81577 | - | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| N5856_RS24805 (N5856_24725) | 81582..81947 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| N5856_RS24810 (N5856_24730) | 81951..82763 | - | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| N5856_RS24815 (N5856_24735) | 82864..83157 | - | 294 | Protein_94 | IS30 family transposase | - |
| N5856_RS24820 (N5856_24740) | 83322..84026 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24825 (N5856_24745) | 84220..84570 | - | 351 | Protein_96 | 60 kDa chaperonin | VF |
| N5856_RS24830 (N5856_24750) | 84633..85181 | + | 549 | WP_014342204.1 | cation:proton antiporter | - |
| N5856_RS24835 (N5856_24755) | 85262..86017 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| N5856_RS24840 (N5856_24760) | 86187..87047 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N5856_RS24845 (N5856_24765) | 87868..89238 | - | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| N5856_RS24850 (N5856_24770) | 89353..90489 | - | 1137 | WP_000080861.1 | DUF3883 domain-containing protein | - |
| N5856_RS24855 (N5856_24775) | 90619..91323 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N5856_RS24860 (N5856_24780) | 91329..91469 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| N5856_RS24865 (N5856_24785) | 91955..92692 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N5856_RS24870 (N5856_24790) | 92689..92913 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| N5856_RS24875 (N5856_24795) | 93124..94617 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|