MGE detailed information
MGE type: Conjugative plasmid MGE length: 114993 bp
Accession: NZ_CP104541 Location: 1..114993 Organism: Escherichia coli strain E6 Replicon: plasmid p2
Accession: NZ_CP104541 Location: 1..114993 Organism: Escherichia coli strain E6 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O76_RS24625 (46) | 46..1077 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| N5O76_RS24630 (1773) | 1773..1931 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| N5O76_RS24635 (1986) | 1986..2255 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| N5O76_RS24640 (2255) | 2255..2533 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| N5O76_RS24645 (2573) | 2573..3421 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| N5O76_RS24650 (3658) | 3658..3783 | - | 126 | Protein_5 | MerR family transcriptional regulator | - |
| N5O76_RS24655 (3778) | 3778..5388 | + | 1611 | Protein_6 | DDE-type integrase/transposase/recombinase | - |
| N5O76_RS24660 (5391) | 5391..6251 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| N5O76_RS24665 (6353) | 6353..7876 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| N5O76_RS24670 (7866) | 7866..8648 | + | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| N5O76_RS24675 (8824) | 8824..9324 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| N5O76_RS24680 (9452) | 9452..10291 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| N5O76_RS24685 (10285) | 10285..10632 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| N5O76_RS24690 (10850) | 10850..12085 | - | 1236 | WP_001137513.1 | IS256 family transposase ISEc58 | Transposase |
| N5O76_RS24695 (12353) | 12353..13846 | - | 1494 | WP_042038115.1 | IS91 family transposase ISVsa3 | Transposase |
| N5O76_RS24700 (14071) | 14071..15708 | - | 1638 | WP_000719078.1 | chaperonin GroEL | - |
| N5O76_RS24705 (15764) | 15764..16084 | - | 321 | WP_000535481.1 | co-chaperone GroES | - |
| N5O76_RS24710 (16291) | 16291..17190 | - | 900 | WP_000131886.1 | hypothetical protein | ARG |
| N5O76_RS24715 (17310) | 17310..18148 | - | 839 | Protein_18 | hypothetical protein | ARG |
| N5O76_RS24720 (18297) | 18297..19310 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| N5O76_RS24725 (19513) | 19513..19863 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| N5O76_RS24730 (19989) | 19989..20264 | + | 276 | Protein_21 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| N5O76_RS24735 (20327) | 20327..21031 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N5O76_RS24740 (21084) | 21084..21377 | + | 294 | Protein_23 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| N5O76_RS24745 (21380) | 21380..24346 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| N5O76_RS24750 (24355) | 24355..24771 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| N5O76_RS24755 (25248) | 25248..25514 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| N5O76_RS24760 (25514) | 25514..26008 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| N5O76_RS24765 (26064) | 26064..26666 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| N5O76_RS24770 (27020) | 27020..28366 | + | 1347 | WP_001132019.1 | protein YagA | - |
| N5O76_RS24775 (28805) | 28805..29482 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24780 (29482) | 29482..29829 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24785 (29849) | 29849..31420 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24790 (31450) | 31450..31623 | + | 174 | Protein_33 | DUF4113 domain-containing protein | - |
| N5O76_RS24795 (31625) | 31625..32041 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| N5O76_RS24800 (32034) | 32034..33014 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| N5O76_RS24805 (33428) | 33428..33736 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| N5O76_RS24810 (33823) | 33823..34467 | - | 645 | WP_001144036.1 | ParA family protein | - |
| N5O76_RS24815 (34647) | 34647..35453 | - | 807 | WP_033904598.1 | site-specific integrase | - |
| N5O76_RS24820 (35454) | 35454..35759 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| N5O76_RS24825 (35761) | 35761..35979 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| N5O76_RS24830 (36576) | 36576..36836 | + | 261 | WP_000343102.1 | hypothetical protein | - |
| N5O76_RS24835 (36833) | 36833..37423 | + | 591 | WP_000194555.1 | hypothetical protein | - |
| N5O76_RS24840 (37441) | 37441..37788 | - | 348 | WP_000142424.1 | DUF6404 family protein | - |
| N5O76_RS24845 (37907) | 37907..38254 | + | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| N5O76_RS24850 (38272) | 38272..39897 | - | 1626 | WP_001456214.1 | colicin Ia central receptor-binding domain-containing protein | - |
| N5O76_RS24855 (40084) | 40084..41655 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24860 (41675) | 41675..42022 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24865 (42022) | 42022..42699 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24870 (42739) | 42739..43862 | - | 1124 | Protein_49 | translesion error-prone DNA polymerase V subunit UmuC | - |
| N5O76_RS24875 (43862) | 43862..44299 | - | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N5O76_RS24880 (44296) | 44296..44544 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| N5O76_RS24885 (44962) | 44962..45864 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| N5O76_RS24890 (45861) | 45861..46172 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| N5O76_RS24895 (46249) | 46249..46932 | + | 684 | WP_000086178.1 | DNA methylase | - |
| N5O76_RS24900 (46933) | 46933..47154 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| N5O76_RS24905 (47114) | 47114..47600 | + | 487 | Protein_56 | DUF1380 domain-containing protein | - |
| N5O76_RS24910 (47651) | 47651..48421 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| N5O76_RS24915 (48839) | 48839..49264 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| N5O76_RS24920 (49311) | 49311..49733 | + | 423 | WP_006907871.1 | DUF1380 family protein | - |
| N5O76_RS24925 (49730) | 49730..49921 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| N5O76_RS24930 (50112) | 50112..50489 | - | 378 | WP_024126038.1 | hypothetical protein | - |
| N5O76_RS24935 (50691) | 50691..51218 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| N5O76_RS24940 (51276) | 51276..51509 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| N5O76_RS24945 (51568) | 51568..53526 | + | 1959 | WP_143553528.1 | ParB/RepB/Spo0J family partition protein | - |
| N5O76_RS24950 (53581) | 53581..54015 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| N5O76_RS24955 (54012) | 54012..54731 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| N5O76_RS24960 (54728) | 54728..55324 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| N5O76_RS24965 (55787) | 55787..56287 | + | 501 | WP_000117633.1 | antirestriction protein ArdA | - |
| N5O76_RS24970 (56289) | 56289..56897 | - | 609 | WP_170852529.1 | hypothetical protein | - |
| N5O76_RS24975 (57016) | 57016..57450 | + | 435 | WP_029392001.1 | hypothetical protein | - |
| N5O76_RS24980 (57544) | 57544..57810 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| N5O76_RS24985 (57875) | 57875..58813 | + | 939 | WP_000078704.1 | hypothetical protein | VF |
| N5O76_RS24990 (58836) | 58836..59033 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| N5O76_RS24995 (59064) | 59064..59315 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| N5O76_RS25000 (59349) | 59349..59651 | - | 303 | WP_261306669.1 | hypothetical protein | - |
| N5O76_RS25005 (59895) | 59895..60743 | + | 849 | WP_021532736.1 | DUF4942 domain-containing protein | - |
| N5O76_RS25010 (60829) | 60829..61164 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| N5O76_RS25015 (61397) | 61397..61729 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| N5O76_RS25020 (61740) | 61740..64439 | + | 2700 | WP_001354015.1 | hypothetical protein | Relaxase |
| N5O76_RS25025 (64476) | 64476..66767 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| N5O76_RS25030 (66760) | 66760..67830 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| N5O76_RS25035 (67849) | 67849..69057 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (69237) | 69237..69294 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (69237) | 69237..69294 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (69237) | 69237..69294 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (69237) | 69237..69294 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| N5O76_RS25040 (69349) | 69349..69501 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| N5O76_RS25045 (70124) | 70124..70420 | + | 297 | WP_001275298.1 | DinQ-like type I toxin DqlB | - |
| N5O76_RS25050 (70485) | 70485..70661 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| N5O76_RS25055 (71053) | 71053..71262 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| N5O76_RS25060 (71334) | 71334..71996 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| N5O76_RS25065 (72061) | 72061..74223 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| N5O76_RS25070 (74320) | 74320..74904 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| N5O76_RS25075 (74933) | 74933..76135 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| N5O76_RS25080 (76102) | 76102..76716 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| N5O76_RS25085 (76716) | 76716..79760 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| N5O76_RS25090 (79850) | 79850..80650 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| N5O76_RS25095 (80634) | 80634..80822 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| N5O76_RS25100 (80886) | 80886..81290 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| N5O76_RS25105 (81341) | 81341..81868 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| N5O76_RS25110 (81868) | 81868..82572 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| N5O76_RS25115 (82572) | 82572..83861 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| N5O76_RS25120 (83864) | 83864..84847 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| N5O76_RS25125 (84858) | 84858..85550 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| N5O76_RS25130 (85547) | 85547..85894 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| N5O76_RS25135 (85912) | 85912..89679 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| N5O76_RS25140 (89769) | 89769..90320 | - | 552 | WP_000014583.1 | Cardiolipin synthase A | VF |
| N5O76_RS25145 (90335) | 90335..90625 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| N5O76_RS25150 (90622) | 90622..91770 | - | 1149 | WP_001024972.1 | hypothetical protein | VF |
| N5O76_RS25155 (91767) | 91767..92585 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| N5O76_RS25160 (92582) | 92582..93040 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| N5O76_RS25165 (93435) | 93435..94019 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| N5O76_RS25170 (94079) | 94079..95281 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| N5O76_RS25175 (95366) | 95366..96190 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| N5O76_RS25180 (96341) | 96341..97495 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| N5O76_RS25185 (97494) | 97494..97847 | + | 354 | WP_001393368.1 | hypothetical protein | - |
| N5O76_RS25190 (98670) | 98670..99971 | - | 1302 | WP_261306670.1 | hypothetical protein | VF |
| N5O76_RS25195 (99971) | 99971..100627 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| N5O76_RS25200 (100612) | 100612..101172 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| N5O76_RS25205 (101182) | 101182..101796 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| N5O76_RS25210 (101814) | 101814..102911 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| N5O76_RS25215 (102924) | 102924..104477 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| N5O76_RS25220 (104488) | 104488..104940 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| N5O76_RS25225 (104927) | 104927..106222 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| N5O76_RS25230 (106215) | 106215..107897 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| N5O76_RS25235 (107911) | 107911..108348 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| N5O76_RS25240 (108348) | 108348..109415 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| N5O76_RS25245 (110089) | 110089..110541 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| N5O76_RS25250 (110584) | 110584..110838 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| N5O76_RS25255 (111106) | 111106..111672 | - | 567 | WP_000776428.1 | protein TraD | - |
| N5O76_RS25260 (111686) | 111686..112369 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| N5O76_RS25265 (112623) | 112623..113156 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| N5O76_RS25270 (113598) | 113598..113885 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| N5O76_RS25275 (113803) | 113803..114081 | - | 279 | WP_219065241.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|