MGE detailed information
MGE type: IScluster/Tn MGE length: 19927 bp
Accession: NZ_CP104540 Location: 55480..75406 Organism: Escherichia coli strain E6 Replicon: plasmid p1
Accession: NZ_CP104540 Location: 55480..75406 Organism: Escherichia coli strain E6 Replicon: plasmid p1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O76_RS23890 (50923) | 50923..51273 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| N5O76_RS23895 (51835) | 51835..52065 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N5O76_RS23900 (52062) | 52062..52478 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N5O76_RS23905 (52640) | 52640..54778 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| N5O76_RS23910 (55136) | 55136..56307 | + | 1172 | WP_094284492.1 | IS91 family transposase ISSbo1 | Transposase |
| N5O76_RS23915 (56470) | 56470..56709 | - | 240 | WP_001105068.1 | hypothetical protein | - |
| N5O76_RS23920 (56815) | 56815..57090 | - | 276 | WP_000421266.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N5O76_RS23925 (57090) | 57090..57374 | - | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| N5O76_RS23930 (57875) | 57875..58066 | + | 192 | Protein_54 | recombinase family protein | - |
| N5O76_RS23935 (58133) | 58133..58837 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N5O76_RS23940 (58883) | 58883..59293 | + | 411 | Protein_56 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| N5O76_RS23945 (59340) | 59340..59498 | + | 159 | Protein_57 | integrase core domain-containing protein | - |
| N5O76_RS23950 (59648) | 59648..60646 | + | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| N5O76_RS23955 (60646) | 60646..61683 | + | 1038 | WP_000110580.1 | Hemin transport system permease protein HmuU | VF |
| N5O76_RS23960 (61683) | 61683..62444 | + | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| N5O76_RS23965 (62501) | 62501..63688 | + | 1188 | WP_160348040.1 | MFS transporter | - |
| N5O76_RS23970 (63781) | 63781..64974 | - | 1194 | Protein_62 | IS3 family transposase IS629 | Transposase |
| N5O76_RS23975 (65121) | 65121..68618 | - | 3498 | WP_160348039.1 | Outer membrane protein IcsA autotransporter | VF |
| N5O76_RS23985 (70140) | 70140..71678 | - | 1539 | WP_096965644.1 | IS66 family transposase ISEc8 | Transposase |
| N5O76_RS23990 (71728) | 71728..72075 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| N5O76_RS23995 (72072) | 72072..72452 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| N5O76_RS24000 (72821) | 72821..74392 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24005 (74412) | 74412..74759 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24010 (74759) | 74759..75436 | - | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| N5O76_RS24015 (75751) | 75751..75948 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| N5O76_RS24020 (75945) | 75945..76229 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| N5O76_RS24025 (76249) | 76249..77382 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| N5O76_RS24030 (77922) | 77922..79160 | + | 1239 | WP_012006540.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| N5O76_RS24035 (79144) | 79144..79971 | + | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|