MGE detailed information
MGE type: Genomic_island MGE length: 30963 bp
Accession: NZ_CP104539 Location: 4218853..4249815 Organism: Escherichia coli strain E6 Replicon: chromosome
Accession: NZ_CP104539 Location: 4218853..4249815 Organism: Escherichia coli strain E6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O76_RS20550 (4214172) | 4214172..4215074 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| N5O76_RS20555 (4215094) | 4215094..4215597 | - | 504 | WP_000872004.1 | type 1 fimbria minor subunit FimG | - |
| N5O76_RS20560 (4215610) | 4215610..4216140 | - | 531 | WP_001244823.1 | type 1 fimbria minor subunit FimF | - |
| N5O76_RS20565 (4216150) | 4216150..4218786 | - | 2637 | WP_000121021.1 | fimbrial usher FimD | - |
| N5O76_RS20570 (4218853) | 4218853..4219578 | - | 726 | WP_000066573.1 | hypothetical protein | VF |
| N5O76_RS20575 (4219615) | 4219615..4220154 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| N5O76_RS20580 (4220219) | 4220219..4220767 | - | 549 | WP_000695543.1 | hypothetical protein | VF |
| N5O76_RS20585 (4221247) | 4221247..4221843 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| N5O76_RS20590 (4222315) | 4222315..4222923 | - | 609 | WP_086629326.1 | Tyrosine recombinase XerC | VF |
| N5O76_RS20595 (4224379) | 4224379..4225095 | + | 717 | WP_021534608.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N5O76_RS20600 (4225115) | 4225115..4226221 | + | 1107 | WP_032217392.1 | N-acetylneuraminate epimerase | - |
| N5O76_RS20605 (4226286) | 4226286..4227266 | + | 981 | WP_053264536.1 | sialate O-acetylesterase | - |
| N5O76_RS20610 (4227274) | 4227274..4227924 | - | 651 | WP_001037963.1 | HNH endonuclease | - |
| N5O76_RS20615 (4228061) | 4228061..4228204 | + | 144 | Protein_4035 | HNH endonuclease | - |
| N5O76_RS20620 (4228303) | 4228303..4228488 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| N5O76_RS20625 (4228526) | 4228526..4229473 | - | 948 | WP_000342497.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| N5O76_RS20630 (4229466) | 4229466..4229861 | - | 396 | WP_000152741.1 | DUF6088 family protein | Antitoxin Detail |
| N5O76_RS20635 (4229931) | 4229931..4230764 | - | 834 | WP_053264535.1 | DUF4942 domain-containing protein | - |
| N5O76_RS20640 (4230879) | 4230879..4231220 | - | 342 | WP_089586169.1 | TA system toxin CbtA family protein | Toxin Detail |
| N5O76_RS20645 (4231251) | 4231251..4231586 | - | 336 | WP_053264533.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5O76_RS20650 (4231586) | 4231586..4232059 | - | 474 | WP_001296921.1 | DNA repair protein RadC | - |
| N5O76_RS20655 (4232089) | 4232089..4232907 | - | 819 | WP_160347992.1 | DUF932 domain-containing protein | - |
| N5O76_RS20660 (4233143) | 4233143..4234096 | - | 954 | WP_053264531.1 | hypothetical protein | - |
| N5O76_RS20665 (4234689) | 4234689..4235303 | + | 615 | WP_000772910.1 | inovirus Gp2 family protein | - |
| N5O76_RS20670 (4235421) | 4235421..4235639 | + | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| N5O76_RS20675 (4235854) | 4235854..4236639 | - | 786 | WP_053264530.1 | hypothetical protein | - |
| N5O76_RS20680 (4236651) | 4236651..4237664 | - | 1014 | WP_000342611.1 | 50S ribosome-binding GTPase | - |
| N5O76_RS20685 (4237703) | 4237703..4238386 | - | 684 | WP_064759377.1 | WYL domain-containing protein | - |
| N5O76_RS20690 (4238962) | 4238962..4242375 | + | 3414 | WP_053264528.1 | DEAD/DEAH box helicase family protein | - |
| N5O76_RS20695 (4242439) | 4242439..4244073 | + | 1635 | WP_053264527.1 | class I SAM-dependent DNA methyltransferase | - |
| N5O76_RS20700 (4244070) | 4244070..4245236 | + | 1167 | WP_053264526.1 | restriction endonuclease subunit S | - |
| N5O76_RS20705 (4245297) | 4245297..4245983 | + | 687 | WP_053264525.1 | hypothetical protein | - |
| N5O76_RS20710 (4246024) | 4246024..4249815 | - | 3792 | WP_053264524.1 | anti-phage defense-associated sirtuin Dsr1 | - |
| N5O76_RS20715 (4249965) | 4249965..4250930 | + | 966 | WP_053264523.1 | 5'-nucleotidase | - |
| N5O76_RS20720 (4251008) | 4251008..4251883 | - | 876 | WP_044066756.1 | HNH endonuclease | - |
| N5O76_RS20725 (4252088) | 4252088..4253359 | - | 1272 | WP_053264522.1 | integrase arm-type DNA-binding domain-containing protein | - |
| N5O76_RS20735 (4253838) | 4253838..4254064 | + | 227 | Protein_4058 | alcohol dehydrogenase catalytic domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|