MGE detailed information
MGE type: Genomic_island MGE length: 71664 bp
Accession: NZ_CP104533 Location: 4493579..4565242 Organism: Escherichia coli strain E10 Replicon: chromosome
Accession: NZ_CP104533 Location: 4493579..4565242 Organism: Escherichia coli strain E10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5O77_RS22330 (4489055) | 4489055..4489393 | + | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| N5O77_RS22335 (4489369) | 4489369..4491066 | + | 1698 | WP_000068942.1 | protein-disulfide reductase DsbD | - |
| N5O77_RS22340 (4491103) | 4491103..4491678 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| N5O77_RS22350 (4492058) | 4492058..4493323 | + | 1266 | WP_001218869.1 | integrase arm-type DNA-binding domain-containing protein | - |
| N5O77_RS22355 (4493579) | 4493579..4494622 | + | 1044 | WP_000147021.1 | hypothetical protein | - |
| N5O77_RS22360 (4495152) | 4495152..4495849 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| N5O77_RS22365 (4495866) | 4495866..4496657 | + | 792 | Protein_4380 | IS3 family transposase | - |
| N5O77_RS22370 (4496824) | 4496824..4497375 | + | 552 | WP_001447126.1 | hypothetical protein | VF |
| N5O77_RS22380 (4498682) | 4498682..4500181 | - | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| N5O77_RS22385 (4500256) | 4500256..4502625 | - | 2370 | WP_000671170.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| N5O77_RS22390 (4502730) | 4502730..4504199 | - | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| N5O77_RS22395 (4504452) | 4504452..4505145 | + | 694 | Protein_4386 | IS1 family transposase IS1N | Transposase |
| N5O77_RS22400 (4505763) | 4505763..4506107 | + | 345 | Protein_4387 | alcohol dehydrogenase catalytic domain-containing protein | - |
| N5O77_RS22405 (4506180) | 4506180..4507336 | + | 1157 | WP_099133509.1 | IS3 family transposase | - |
| N5O77_RS22410 (4507357) | 4507357..4507542 | + | 186 | Protein_4389 | IS66 family transposase IS682 | Transposase |
| N5O77_RS22415 (4507677) | 4507677..4509005 | + | 1329 | WP_261175543.1 | nucleotidyltransferase | - |
| N5O77_RS22420 (4509013) | 4509013..4509588 | + | 576 | WP_001514083.1 | SLATT domain-containing protein | - |
| N5O77_RS22425 (4510141) | 4510141..4510866 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| N5O77_RS22430 (4510863) | 4510863..4512167 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| N5O77_RS22435 (4512164) | 4512164..4512916 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| N5O77_RS22440 (4512916) | 4512916..4514700 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| N5O77_RS22445 (4514832) | 4514832..4516286 | - | 1455 | WP_261175544.1 | hypothetical protein | - |
| N5O77_RS22450 (4516525) | 4516525..4517001 | - | 477 | Protein_4397 | hypothetical protein | - |
| N5O77_RS22455 (4517001) | 4517001..4517345 | - | 345 | Protein_4398 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| N5O77_RS22460 (4518025) | 4518025..4518216 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| N5O77_RS22465 (4518269) | 4518269..4518502 | - | 234 | WP_000124175.1 | hypothetical protein | - |
| N5O77_RS22470 (4518598) | 4518598..4519097 | - | 500 | Protein_4401 | DNA-binding protein | - |
| N5O77_RS22475 (4519448) | 4519448..4520566 | + | 1119 | WP_000135343.1 | hypothetical protein | VF |
| N5O77_RS22480 (4520706) | 4520706..4521392 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| N5O77_RS22485 (4521447) | 4521447..4522205 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| N5O77_RS22490 (4522189) | 4522189..4522914 | + | 726 | WP_002430742.1 | propanediol utilization system flavoprotein GrpD | - |
| N5O77_RS22495 (4522926) | 4522926..4523195 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| N5O77_RS22500 (4523223) | 4523223..4523720 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| N5O77_RS22505 (4523749) | 4523749..4524945 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| N5O77_RS22510 (4525230) | 4525230..4525511 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| N5O77_RS22515 (4525533) | 4525533..4526318 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| N5O77_RS22520 (4526379) | 4526379..4527896 | + | 1518 | WP_000997839.1 | hypothetical protein | VF |
| N5O77_RS22525 (4527920) | 4527920..4528219 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| N5O77_RS22530 (4528230) | 4528230..4528805 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| N5O77_RS22535 (4528854) | 4528854..4531406 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| N5O77_RS22540 (4531515) | 4531515..4532432 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| N5O77_RS22545 (4532569) | 4532569..4533474 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| N5O77_RS22550 (4533960) | 4533960..4534499 | + | 540 | WP_001332064.1 | maturase | - |
| N5O77_RS22555 (4534566) | 4534566..4535048 | + | 483 | WP_261175545.1 | reverse transcriptase domain-containing protein | - |
| N5O77_RS22560 (4535598) | 4535598..4536860 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| N5O77_RS22565 (4536877) | 4536877..4537932 | + | 1056 | WP_000494233.1 | hypothetical protein | VF |
| N5O77_RS22570 (4538061) | 4538061..4539212 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| N5O77_RS22575 (4539257) | 4539257..4539802 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| N5O77_RS22580 (4540159) | 4540159..4540344 | - | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| N5O77_RS22585 (4540295) | 4540295..4540504 | - | 210 | WP_001332061.1 | hypothetical protein | VF |
| N5O77_RS22590 (4540776) | 4540776..4541147 | - | 372 | WP_002430738.1 | TetR family transcriptional regulator | - |
| N5O77_RS22595 (4541247) | 4541247..4542395 | - | 1149 | Protein_4426 | hypothetical protein | VF |
| N5O77_RS22600 (4542495) | 4542495..4542755 | + | 261 | Protein_4427 | IS3 family transposase IS2 | Transposase |
| N5O77_RS22605 (4542747) | 4542747..4542809 | - | 63 | Protein_4428 | IS3 family transposase IS2 | Transposase |
| N5O77_RS22610 (4542938) | 4542938..4543063 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| N5O77_RS22615 (4543060) | 4543060..4543293 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| N5O77_RS22620 (4543362) | 4543362..4543937 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| N5O77_RS22625 (4544284) | 4544284..4545015 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| N5O77_RS22630 (4546468) | 4546468..4547691 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| N5O77_RS22635 (4547792) | 4547792..4548676 | + | 885 | WP_001116794.1 | YfjP family GTPase | - |
| N5O77_RS22640 (4548879) | 4548879..4549559 | + | 681 | WP_001278649.1 | WYL domain-containing protein | - |
| N5O77_RS22645 (4549710) | 4549710..4550387 | + | 678 | WP_001097565.1 | hypothetical protein | - |
| N5O77_RS22650 (4550393) | 4550393..4550626 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| N5O77_RS22655 (4550716) | 4550716..4551534 | + | 819 | WP_001175155.1 | DUF932 domain-containing protein | - |
| N5O77_RS22660 (4551560) | 4551560..4551700 | - | 141 | WP_000997937.1 | hypothetical protein | - |
| N5O77_RS22665 (4551800) | 4551800..4552279 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| N5O77_RS22670 (4552294) | 4552294..4552770 | + | 477 | WP_001186193.1 | RadC family protein | - |
| N5O77_RS22675 (4552857) | 4552857..4553078 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| N5O77_RS22680 (4553158) | 4553158..4553526 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N5O77_RS22685 (4553615) | 4553615..4553992 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| N5O77_RS22690 (4553989) | 4553989..4554186 | + | 198 | Protein_4445 | DUF5983 family protein | - |
| N5O77_RS22695 (4554214) | 4554214..4554411 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| N5O77_RS22700 (4554496) | 4554496..4555056 | + | 561 | Protein_4447 | DUF4942 domain-containing protein | - |
| N5O77_RS22705 (4555891) | 4555891..4557429 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| N5O77_RS22710 (4557795) | 4557795..4559129 | + | 1335 | WP_153789750.1 | cadaverine/lysine antiporter | - |
| N5O77_RS22715 (4559209) | 4559209..4561356 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| N5O77_RS22720 (4561415) | 4561415..4562872 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| N5O77_RS22725 (4563109) | 4563109..4564626 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| N5O77_RS22730 (4564745) | 4564745..4564918 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| N5O77_RS22735 (4564946) | 4564946..4565242 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| N5O77_RS22740 (4565470) | 4565470..4565742 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| N5O77_RS22745 (4565754) | 4565754..4565984 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| N5O77_RS22750 (4566165) | 4566165..4567796 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| N5O77_RS22755 (4567793) | 4567793..4568512 | + | 720 | WP_000611291.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|