MGE detailed information
MGE type: Genomic_island MGE length: 10439 bp
Accession: NZ_CP104491 Location: 1000431..1010869 Organism: Salmonella enterica strain SalSpp_sample_05_No.1 Replicon: chromosome
Accession: NZ_CP104491 Location: 1000431..1010869 Organism: Salmonella enterica strain SalSpp_sample_05_No.1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4229_RS04730 (996980) | 996980..997378 | + | 399 | Protein_927 | cytoplasmic protein | - |
| N4229_RS04735 (997569) | 997569..997808 | + | 240 | Protein_928 | hypothetical protein | - |
| N4229_RS04740 (997965) | 997965..998633 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| N4229_RS04745 (998660) | 998660..999154 | + | 495 | WP_020899151.1 | hypothetical protein | - |
| N4229_RS04750 (999399) | 999399..1000055 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| N4229_RS04755 (1000402) | 1000402..1000607 | + | 206 | Protein_932 | IS5 family transposase ISEcl3 | Transposase |
| N4229_RS04760 (1000680) | 1000680..1001207 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| N4229_RS04765 (1001204) | 1001204..1001494 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| N4229_RS04770 (1001764) | 1001764..1001953 | - | 190 | Protein_935 | IS3 family transposase | - |
| N4229_RS04775 (1002194) | 1002194..1002520 | + | 327 | WP_050067855.1 | hypothetical protein | - |
| N4229_RS04780 (1002793) | 1002793..1003140 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| N4229_RS04785 (1003125) | 1003125..1003574 | - | 450 | WP_050067853.1 | hypothetical protein | - |
| N4229_RS04790 (1004006) | 1004006..1004449 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| N4229_RS04795 (1004906) | 1004906..1005556 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| N4229_RS04800 (1005553) | 1005553..1007241 | + | 1689 | WP_000848101.1 | Type 3 secretion system secretin | VF |
| N4229_RS04805 (1007238) | 1007238..1008356 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| N4229_RS04810 (1008381) | 1008381..1010438 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| N4229_RS04815 (1010462) | 1010462..1010869 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| N4229_RS04820 (1010866) | 1010866..1012161 | + | 1296 | WP_050067852.1 | SctN family type III secretion system ATPase InvC | - |
| N4229_RS04825 (1012139) | 1012139..1012582 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| N4229_RS04830 (1012582) | 1012582..1013592 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| N4229_RS04835 (1013592) | 1013592..1014503 | + | 912 | WP_050067851.1 | SPI-1 type III secretion system protein SpaO | - |
| N4229_RS04840 (1014493) | 1014493..1015167 | + | 675 | WP_260951570.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| N4229_RS04845 (1015193) | 1015193..1015453 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.006 |