MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP104366 Location: 995012..1005438 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Accession: NZ_CP104366 Location: 995012..1005438 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4533_RS04730 (990125) | 990125..990505 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| N4533_RS04735 (990561) | 990561..993128 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| N4533_RS04740 (993287) | 993287..993808 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| N4533_RS04745 (993980) | 993980..994636 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| N4533_RS04750 (994983) | 994983..995188 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| N4533_RS04755 (995261) | 995261..995788 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| N4533_RS04760 (995785) | 995785..996075 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| N4533_RS04765 (996345) | 996345..996523 | - | 179 | Protein_934 | IS3 family transposase | - |
| N4533_RS04770 (996764) | 996764..997090 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| N4533_RS04775 (997363) | 997363..997710 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| N4533_RS04780 (997695) | 997695..998144 | - | 450 | WP_000381610.1 | membrane protein | - |
| N4533_RS04785 (998575) | 998575..999018 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| N4533_RS04790 (999475) | 999475..1000125 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| N4533_RS04795 (1000122) | 1000122..1001810 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| N4533_RS04800 (1001807) | 1001807..1002925 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| N4533_RS04805 (1002950) | 1002950..1005007 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| N4533_RS04810 (1005031) | 1005031..1005438 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| N4533_RS04815 (1005435) | 1005435..1006730 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| N4533_RS04820 (1006708) | 1006708..1007151 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| N4533_RS04825 (1007151) | 1007151..1008161 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| N4533_RS04830 (1008161) | 1008161..1009072 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| N4533_RS04835 (1009062) | 1009062..1009736 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| N4533_RS04840 (1009762) | 1009762..1010022 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |