MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP104366 Location: 2422298..2434383 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Accession: NZ_CP104366 Location: 2422298..2434383 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain PNUSAS028809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N4533_RS11785 (2418219) | 2418219..2419421 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| N4533_RS11790 (2419434) | 2419434..2420885 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| N4533_RS11795 (2421029) | 2421029..2422036 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| N4533_RS11800 (2422295) | 2422295..2423761 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| N4533_RS11805 (2424569) | 2424569..2425283 | + | 715 | Protein_2308 | helix-turn-helix domain-containing protein | - |
| N4533_RS11810 (2425339) | 2425339..2426247 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| N4533_RS11815 (2426390) | 2426390..2426722 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| N4533_RS11820 (2426712) | 2426712..2426927 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| N4533_RS11825 (2427079) | 2427079..2427327 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| N4533_RS11830 (2427317) | 2427317..2427601 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N4533_RS11835 (2427772) | 2427772..2428161 | + | 390 | WP_000194089.1 | RidA family protein | - |
| N4533_RS11840 (2428213) | 2428213..2429292 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| N4533_RS11845 (2429485) | 2429485..2429973 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| N4533_RS11850 (2430018) | 2430018..2431526 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| N4533_RS11855 (2431516) | 2431516..2432757 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| N4533_RS11860 (2432827) | 2432827..2434383 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| N4533_RS11865 (2434560) | 2434560..2435846 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| N4533_RS11870 (2435821) | 2435821..2436846 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| N4533_RS11875 (2436905) | 2436905..2437696 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| N4533_RS11880 (2437742) | 2437742..2438833 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |