MGE detailed information
MGE type: Prophage MGE length: 61416 bp
Accession: NZ_CP104309 Location: 2560070..2621485 Organism: Escherichia coli O157:H7 strain 380-94 Replicon: chromosome
Accession: NZ_CP104309 Location: 2560070..2621485 Organism: Escherichia coli O157:H7 strain 380-94 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUE46_RS12825 (2555110) | 2555110..2556141 | - | 1032 | WP_000559900.1 | low conductance mechanosensitive channel YnaI | - |
| NUE46_RS12830 (2556385) | 2556385..2556642 | + | 258 | WP_000605090.1 | DUF2534 family protein | - |
| NUE46_RS12835 (2556692) | 2556692..2557642 | - | 951 | WP_001262123.1 | universal stress protein UspE | - |
| NUE46_RS12840 (2557794) | 2557794..2558546 | - | 753 | WP_000611911.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| NUE46_RS12845 (2558741) | 2558741..2559256 | - | 516 | WP_000945010.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| NUE46_RS12850 (2559267) | 2559267..2560028 | - | 762 | Protein_2514 | AbgT family transporter | - |
| NUE46_RS12860 (2561339) | 2561339..2562106 | - | 768 | Protein_2516 | AbgT family transporter | - |
| NUE46_RS12865 (2562143) | 2562143..2563588 | - | 1446 | WP_001156434.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgB | - |
| NUE46_RS12870 (2563588) | 2563588..2564898 | - | 1311 | WP_000444937.1 | p-aminobenzoyl-glutamate hydrolase subunit AbgA | - |
| NUE46_RS12875 (2565074) | 2565074..2565982 | + | 909 | WP_000885454.1 | LysR family transcriptional regulator | - |
| NUE46_RS12880 (2566312) | 2566312..2566875 | + | 564 | WP_001046821.1 | DNA endonuclease SmrA | - |
| NUE46_RS12885 (2566896) | 2566896..2568128 | - | 1233 | WP_000628061.1 | diguanylate cyclase DgcM | - |
| NUE46_RS12890 (2568322) | 2568322..2568369 | + | 48 | WP_211180494.1 | protein YnaN | - |
| NUE46_RS12895 (2568383) | 2568383..2569366 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| NUE46_RS12900 (2569641) | 2569641..2569811 | + | 171 | WP_001625136.1 | protein YnaL | - |
| NUE46_RS12905 (2569844) | 2569844..2571217 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| NUE46_RS12910 (2571346) | 2571346..2572281 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| NUE46_RS12915 (2572333) | 2572333..2573568 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| NUE46_RS12920 (2573570) | 2573570..2573785 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| - (2573889) | 2573889..2574067 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2573889) | 2573889..2574067 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2573889) | 2573889..2574067 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2573889) | 2573889..2574067 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| NUE46_RS12925 (2573885) | 2573885..2574073 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| NUE46_RS12930 (2574111) | 2574111..2574260 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| NUE46_RS12935 (2574316) | 2574316..2575125 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| NUE46_RS12940 (2575118) | 2575118..2577718 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| NUE46_RS12945 (2577820) | 2577820..2578095 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| NUE46_RS12950 (2578170) | 2578170..2578340 | - | 171 | WP_001352098.1 | YdaE family protein | - |
| NUE46_RS12955 (2578340) | 2578340..2578561 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| NUE46_RS12960 (2579003) | 2579003..2579491 | + | 489 | WP_001312793.1 | superinfection exclusion B family protein | - |
| NUE46_RS12965 (2579488) | 2579488..2579643 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| NUE46_RS12970 (2579654) | 2579654..2579833 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| NUE46_RS12975 (2580076) | 2580076..2580495 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| NUE46_RS12980 (2580575) | 2580575..2580829 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| NUE46_RS12985 (2580826) | 2580826..2581248 | + | 423 | WP_000693803.1 | toxin YdaT family protein | - |
| NUE46_RS12990 (2581326) | 2581326..2582114 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| NUE46_RS12995 (2582121) | 2582121..2582867 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| NUE46_RS13000 (2582890) | 2582890..2583651 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| NUE46_RS13005 (2583667) | 2583667..2584089 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| NUE46_RS13010 (2584195) | 2584195..2584407 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| NUE46_RS13015 (2584440) | 2584440..2584657 | + | 218 | Protein_2547 | DUF4014 family protein | - |
| NUE46_RS13020 (2584659) | 2584659..2584922 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| NUE46_RS13025 (2584933) | 2584933..2585094 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| NUE46_RS13030 (2585152) | 2585152..2585256 | + | 105 | Protein_2550 | hypothetical protein | - |
| NUE46_RS13035 (2585850) | 2585850..2587001 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| NUE46_RS13040 (2586969) | 2586969..2587958 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| NUE46_RS13045 (2587958) | 2587958..2589349 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| NUE46_RS13050 (2589849) | 2589849..2590448 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| NUE46_RS13055 (2590448) | 2590448..2590738 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| NUE46_RS13060 (2590735) | 2590735..2591289 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| NUE46_RS13075 (2591851) | 2591851..2592282 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| NUE46_RS13080 (2592279) | 2592279..2592446 | + | 168 | WP_000216636.1 | DUF3927 family protein | - |
| NUE46_RS13085 (2592857) | 2592857..2594710 | + | 1854 | WP_000143079.1 | SASA family carbohydrate esterase | - |
| NUE46_RS13090 (2594860) | 2594860..2595075 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| NUE46_RS13095 (2595080) | 2595080..2595424 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| NUE46_RS13100 (2595475) | 2595475..2596008 | + | 534 | WP_000992086.1 | lysozyme | - |
| NUE46_RS13105 (2596282) | 2596282..2596977 | + | 696 | WP_000661712.1 | phage antirepressor protein | - |
| NUE46_RS13110 (2597072) | 2597072..2597203 | + | 132 | WP_001280923.1 | hypothetical protein | - |
| NUE46_RS13115 (2597426) | 2597426..2597611 | + | 186 | WP_012817877.1 | Rz1 family lipoprotein | - |
| NUE46_RS13120 (2598012) | 2598012..2598338 | + | 327 | WP_000828070.1 | TonB family protein | - |
| NUE46_RS13125 (2598470) | 2598470..2598670 | - | 201 | WP_000095744.1 | YlcI/YnfO family protein | - |
| NUE46_RS13130 (2598712) | 2598712..2599077 | + | 366 | WP_000829192.1 | HNH endonuclease | - |
| NUE46_RS13135 (2599366) | 2599366..2599929 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| NUE46_RS13140 (2599926) | 2599926..2601587 | + | 1662 | WP_001411753.1 | terminase large subunit | - |
| NUE46_RS13145 (2601651) | 2601651..2603588 | + | 1938 | WP_000173011.1 | phage major capsid protein | - |
| NUE46_RS13150 (2603633) | 2603633..2603854 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| NUE46_RS13155 (2603800) | 2603800..2606384 | + | 2585 | Protein_2573 | phage portal protein | - |
| NUE46_RS13160 (2606381) | 2606381..2606707 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| NUE46_RS13165 (2606717) | 2606717..2607067 | + | 351 | WP_001007911.1 | phage head closure protein | - |
| NUE46_RS13170 (2607064) | 2607064..2607510 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| NUE46_RS13175 (2607507) | 2607507..2607851 | + | 345 | WP_000133393.1 | DUF3168 domain-containing protein | - |
| NUE46_RS13180 (2607920) | 2607920..2608636 | + | 717 | WP_001275479.1 | major tail subunit | - |
| NUE46_RS13185 (2608642) | 2608642..2609016 | + | 375 | WP_001030060.1 | phage tail assembly chaperone | - |
| NUE46_RS13190 (2609112) | 2609112..2609321 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| NUE46_RS13195 (2609373) | 2609373..2612453 | + | 3081 | WP_000212768.1 | phage tail tape measure protein | - |
| NUE46_RS13200 (2612446) | 2612446..2612787 | + | 342 | WP_000807964.1 | phage tail protein | - |
| NUE46_RS13205 (2612787) | 2612787..2613485 | + | 699 | WP_001152159.1 | phage minor tail protein L | - |
| NUE46_RS13210 (2613496) | 2613496..2614239 | + | 744 | WP_000194763.1 | C40 family peptidase | - |
| NUE46_RS13215 (2614236) | 2614236..2614817 | + | 582 | WP_001089974.1 | tail assembly protein | - |
| NUE46_RS13220 (2615008) | 2615008..2615535 | - | 528 | WP_000649829.1 | Superoxide dismutase [Cu-Zn] 1 | VF |
| NUE46_RS13225 (2615669) | 2615669..2619166 | + | 3498 | WP_000515042.1 | host specificity protein J | - |
| NUE46_RS13230 (2619237) | 2619237..2619836 | + | 600 | WP_001230550.1 | Outer membrane protein X | VF |
| NUE46_RS13235 (2619901) | 2619901..2621214 | + | 1314 | WP_000268955.1 | ISNCY family transposase KIS | Transposase |
| NUE46_RS13240 (2621216) | 2621216..2621485 | + | 270 | WP_001023992.1 | phage tail fiber C-terminal domain-containing protein | - |
| NUE46_RS13245 (2621598) | 2621598..2622173 | + | 576 | WP_001131659.1 | DUF1076 domain-containing protein | - |
| NUE46_RS13250 (2622246) | 2622246..2622875 | + | 630 | WP_001443810.1 | DUF1076 domain-containing protein | - |
| NUE46_RS13255 (2622957) | 2622957..2623598 | + | 642 | WP_001143784.1 | DUF1076 domain-containing protein | - |
| NUE46_RS13260 (2624179) | 2624179..2624613 | - | 435 | WP_001295593.1 | universal stress protein UspF | - |
| NUE46_RS13265 (2624754) | 2624754..2625867 | - | 1114 | Protein_2595 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10219 | NC_002695 | 1921609..1970151 | 0.009 |