MGE detailed information
MGE type: Prophage MGE length: 52712 bp
Accession: NZ_CP104309 Location: 2402722..2455433 Organism: Escherichia coli O157:H7 strain 380-94 Replicon: chromosome
Accession: NZ_CP104309 Location: 2402722..2455433 Organism: Escherichia coli O157:H7 strain 380-94 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUE46_RS11955 (2398622) | 2398622..2399842 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| NUE46_RS11960 (2399967) | 2399967..2400662 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| NUE46_RS11965 (2400615) | 2400615..2401907 | - | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| NUE46_RS11970 (2402065) | 2402065..2402679 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| NUE46_RS11975 (2402722) | 2402722..2403576 | - | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| NUE46_RS11980 (2403578) | 2403578..2404195 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| NUE46_RS11985 (2404206) | 2404206..2406629 | - | 2424 | WP_001414236.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NUE46_RS11990 (2406690) | 2406690..2409116 | - | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| NUE46_RS11995 (2409315) | 2409315..2409620 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| NUE46_RS12000 (2409728) | 2409728..2410438 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| NUE46_RS12005 (2410441) | 2410441..2411001 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| NUE46_RS12010 (2411036) | 2411036..2411377 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| NUE46_RS12015 (2411512) | 2411512..2411838 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| NUE46_RS12020 (2412044) | 2412044..2412130 | + | 87 | Protein_2351 | hypothetical protein | - |
| NUE46_RS12025 (2412110) | 2412110..2412792 | - | 683 | Protein_2352 | DUF3596 domain-containing protein | - |
| NUE46_RS12030 (2412827) | 2412827..2413078 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| NUE46_RS12035 (2413151) | 2413151..2415622 | - | 2472 | WP_000048458.1 | exonuclease | - |
| NUE46_RS12040 (2415715) | 2415715..2415906 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| NUE46_RS12045 (2415903) | 2415903..2416091 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| NUE46_RS12050 (2416660) | 2416660..2416878 | - | 219 | WP_001171930.1 | protein YdfC | - |
| NUE46_RS12055 (2416950) | 2416950..2417249 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| NUE46_RS12060 (2417602) | 2417602..2417880 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NUE46_RS12065 (2417882) | 2417882..2418073 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| NUE46_RS12070 (2418094) | 2418094..2418465 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| NUE46_RS12075 (2418563) | 2418563..2418865 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| NUE46_RS12080 (2418862) | 2418862..2419287 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| NUE46_RS12085 (2419310) | 2419310..2420272 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| NUE46_RS12090 (2420279) | 2420279..2421019 | + | 741 | WP_000788938.1 | ATP-binding protein | - |
| NUE46_RS12095 (2421045) | 2421045..2421814 | + | 770 | Protein_2366 | DUF1627 domain-containing protein | - |
| NUE46_RS12100 (2421830) | 2421830..2422225 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| NUE46_RS12105 (2422282) | 2422282..2422866 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| NUE46_RS12110 (2422982) | 2422982..2423086 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| NUE46_RS12115 (2423332) | 2423332..2423487 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| NUE46_RS12120 (2423655) | 2423655..2423933 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| NUE46_RS12125 (2423935) | 2423935..2424984 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| NUE46_RS12130 (2424997) | 2424997..2425356 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NUE46_RS12135 (2425353) | 2425353..2426042 | + | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| NUE46_RS12155 (2426682) | 2426682..2427110 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| NUE46_RS12160 (2427107) | 2427107..2427274 | + | 168 | WP_000216653.1 | DUF3927 family protein | - |
| NUE46_RS12165 (2427469) | 2427469..2427612 | - | 144 | Protein_2377 | hypothetical protein | - |
| NUE46_RS12170 (2427589) | 2427589..2429439 | + | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| NUE46_RS12175 (2429879) | 2429879..2430094 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| NUE46_RS12180 (2430099) | 2430099..2430443 | + | 345 | WP_000731259.1 | YdfR family protein | - |
| NUE46_RS12185 (2430494) | 2430494..2431027 | + | 534 | WP_000992137.1 | lysozyme | - |
| NUE46_RS12190 (2431298) | 2431298..2431867 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| NUE46_RS12195 (2431867) | 2431867..2432013 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| NUE46_RS12200 (2432241) | 2432241..2432426 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| NUE46_RS12205 (2432851) | 2432851..2433078 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| NUE46_RS12210 (2433120) | 2433120..2433485 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| NUE46_RS12215 (2433775) | 2433775..2434338 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| NUE46_RS12220 (2434335) | 2434335..2435996 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| NUE46_RS12225 (2436060) | 2436060..2437997 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| NUE46_RS12230 (2438042) | 2438042..2438263 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| NUE46_RS12235 (2438209) | 2438209..2440788 | + | 2580 | WP_001304108.1 | phage portal protein | - |
| NUE46_RS12240 (2440791) | 2440791..2441117 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| NUE46_RS12245 (2441127) | 2441127..2441477 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| NUE46_RS12250 (2441474) | 2441474..2441920 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| NUE46_RS12255 (2441917) | 2441917..2442261 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| NUE46_RS12260 (2442327) | 2442327..2443043 | + | 717 | WP_001275434.1 | major tail subunit | - |
| NUE46_RS12265 (2443058) | 2443058..2443432 | + | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| NUE46_RS12270 (2443528) | 2443528..2443737 | + | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| NUE46_RS12275 (2443785) | 2443785..2447027 | + | 3243 | WP_260655078.1 | phage tail tape measure protein | - |
| NUE46_RS12280 (2447020) | 2447020..2447361 | + | 342 | WP_000807954.1 | phage tail protein | - |
| NUE46_RS12285 (2447361) | 2447361..2448059 | + | 699 | WP_070080222.1 | phage minor tail protein L | - |
| NUE46_RS12290 (2448070) | 2448070..2448813 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| NUE46_RS12295 (2448810) | 2448810..2449391 | + | 582 | WP_001089999.1 | tail assembly protein | - |
| NUE46_RS12300 (2449733) | 2449733..2453207 | + | 3475 | Protein_2404 | host specificity protein J | - |
| NUE46_RS12305 (2453275) | 2453275..2453874 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| NUE46_RS12310 (2453939) | 2453939..2455162 | + | 1224 | WP_000268860.1 | prophage tail fiber N-terminal domain-containing protein | - |
| NUE46_RS12315 (2455164) | 2455164..2455433 | + | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| NUE46_RS12320 (2455592) | 2455592..2456122 | + | 531 | WP_044386033.1 | DUF1076 domain-containing protein | - |
| NUE46_RS12325 (2456833) | 2456833..2457483 | + | 651 | WP_001121225.1 | type III secretion system effector NleG7 | - |
| NUE46_RS12330 (2457633) | 2457633..2458028 | + | 396 | Protein_2410 | IS256 family transposase | - |
| NUE46_RS12335 (2458066) | 2458066..2459604 | - | 1539 | WP_000998048.1 | IS66-like element ISEc8 family transposase | - |
| NUE46_RS12340 (2459654) | 2459654..2460001 | - | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| NUE46_RS12345 (2459998) | 2459998..2460378 | - | 381 | WP_001171554.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | Prophage | TA20321 | NC_002655 | 2282958..2329636 | 0.01 |