MGE detailed information
MGE type: Genomic_island MGE length: 49253 bp
Accession: NZ_CP104206 Location: 4063589..4112841 Organism: Escherichia coli strain hubt-sl Replicon: chromosome
Accession: NZ_CP104206 Location: 4063589..4112841 Organism: Escherichia coli strain hubt-sl Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1H45_RS19850 (4058908) | 4058908..4059810 | - | 903 | WP_000832227.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
| N1H45_RS19855 (4059830) | 4059830..4060333 | - | 504 | WP_000872005.1 | type 1 fimbria minor subunit FimG | - |
| N1H45_RS19860 (4060346) | 4060346..4060876 | - | 531 | WP_001244838.1 | type 1 fimbria minor subunit FimF | - |
| N1H45_RS19865 (4060886) | 4060886..4063522 | - | 2637 | WP_000120941.1 | fimbrial usher FimD | - |
| N1H45_RS19870 (4063589) | 4063589..4064314 | - | 726 | WP_000066573.1 | hypothetical protein | VF |
| N1H45_RS19875 (4064351) | 4064351..4064890 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| N1H45_RS19880 (4064955) | 4064955..4065503 | - | 549 | WP_000695543.1 | hypothetical protein | VF |
| N1H45_RS19885 (4065983) | 4065983..4066579 | - | 597 | WP_000044711.1 | hypothetical protein | VF |
| N1H45_RS19890 (4067057) | 4067057..4067659 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| N1H45_RS19895 (4069115) | 4069115..4069831 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N1H45_RS19900 (4069851) | 4069851..4070957 | + | 1107 | WP_001349986.1 | N-acetylneuraminate epimerase | - |
| N1H45_RS19905 (4071022) | 4071022..4072002 | + | 981 | WP_000991460.1 | sialate O-acetylesterase | - |
| N1H45_RS19910 (4072010) | 4072010..4072114 | - | 105 | Protein_3891 | HNH endonuclease | - |
| N1H45_RS19915 (4072214) | 4072214..4073086 | + | 873 | WP_000168572.1 | HNH endonuclease | - |
| N1H45_RS19920 (4073256) | 4073256..4075331 | + | 2076 | WP_000177023.1 | AAA family ATPase | - |
| N1H45_RS19925 (4075324) | 4075324..4076667 | + | 1344 | WP_000504878.1 | McrC family protein | - |
| N1H45_RS19930 (4076664) | 4076664..4077050 | + | 387 | WP_000148648.1 | hypothetical protein | - |
| N1H45_RS19935 (4077101) | 4077101..4079248 | + | 2148 | WP_001040175.1 | N-6 DNA methylase | - |
| N1H45_RS19940 (4079248) | 4079248..4080774 | + | 1527 | WP_000357099.1 | hypothetical protein | - |
| N1H45_RS19945 (4080792) | 4080792..4082078 | + | 1287 | WP_000377420.1 | hypothetical protein | - |
| N1H45_RS19950 (4082075) | 4082075..4086361 | + | 4287 | WP_000007264.1 | hypothetical protein | - |
| N1H45_RS19955 (4086372) | 4086372..4087220 | + | 849 | WP_000092642.1 | hypothetical protein | - |
| N1H45_RS19960 (4087223) | 4087223..4088380 | + | 1158 | WP_001004904.1 | hypothetical protein | - |
| N1H45_RS19965 (4088370) | 4088370..4090055 | + | 1686 | WP_000323666.1 | ATP-binding protein | - |
| N1H45_RS19970 (4090063) | 4090063..4090605 | + | 543 | WP_001115385.1 | hypothetical protein | - |
| N1H45_RS19975 (4090602) | 4090602..4092071 | + | 1470 | WP_001022619.1 | hypothetical protein | VF |
| N1H45_RS19980 (4092272) | 4092272..4093537 | - | 1266 | WP_001218329.1 | hypothetical protein ; Integrase | Integrase |
| N1H45_RS19985 (4093930) | 4093930..4094877 | - | 948 | WP_000342500.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| N1H45_RS19990 (4094870) | 4094870..4095265 | - | 396 | WP_000152741.1 | DUF6088 family protein | Antitoxin Detail |
| N1H45_RS19995 (4095335) | 4095335..4096168 | - | 834 | WP_001192746.1 | DUF4942 domain-containing protein | - |
| N1H45_RS20000 (4096283) | 4096283..4096624 | - | 342 | WP_000691790.1 | TA system toxin CbtA family protein | Toxin Detail |
| N1H45_RS20005 (4096655) | 4096655..4096990 | - | 336 | WP_000939438.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| N1H45_RS20010 (4096990) | 4096990..4097463 | - | 474 | WP_001292742.1 | DNA repair protein RadC | - |
| N1H45_RS20015 (4097493) | 4097493..4098311 | - | 819 | WP_000761991.1 | DUF932 domain-containing protein | - |
| N1H45_RS20020 (4098547) | 4098547..4099500 | - | 954 | WP_000290405.1 | hypothetical protein | - |
| N1H45_RS20025 (4100093) | 4100093..4100707 | + | 615 | WP_000772909.1 | inovirus Gp2 family protein | - |
| N1H45_RS20030 (4100825) | 4100825..4101043 | + | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| N1H45_RS20035 (4101264) | 4101264..4102028 | - | 765 | WP_000802556.1 | hypothetical protein | - |
| N1H45_RS20040 (4102041) | 4102041..4103054 | - | 1014 | WP_000342612.1 | 50S ribosome-binding GTPase | - |
| N1H45_RS20045 (4103093) | 4103093..4103776 | - | 684 | WP_000856942.1 | WYL domain-containing protein | - |
| N1H45_RS20050 (4104353) | 4104353..4107766 | + | 3414 | WP_000438157.1 | DEAD/DEAH box helicase family protein | - |
| N1H45_RS20055 (4107830) | 4107830..4109464 | + | 1635 | WP_000627732.1 | class I SAM-dependent DNA methyltransferase | - |
| N1H45_RS20060 (4109461) | 4109461..4110639 | + | 1179 | WP_225376600.1 | restriction endonuclease subunit S | - |
| N1H45_RS20065 (4110834) | 4110834..4112582 | + | 1749 | WP_000776118.1 | hypothetical protein | - |
| N1H45_RS20070 (4112575) | 4112575..4112841 | + | 267 | WP_001291041.1 | hypothetical protein | - |
| N1H45_RS20075 (4112983) | 4112983..4113948 | + | 966 | WP_001115625.1 | 5'-nucleotidase | - |
| N1H45_RS20080 (4114026) | 4114026..4114901 | - | 876 | WP_000199891.1 | HNH endonuclease | - |
| N1H45_RS20085 (4115117) | 4115117..4116385 | - | 1269 | WP_001219046.1 | integrase arm-type DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|