MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60959 bp
Accession: NZ_CP104081 Location: 1..60959 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-4
Accession: NZ_CP104081 Location: 1..60959 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0M81_RS24275 (N0M81_24275) | 488..1516 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| N0M81_RS24280 (N0M81_24280) | 2217..2407 | + | 191 | Protein_1 | hypothetical protein | - |
| N0M81_RS24285 (N0M81_24285) | 3057..3209 | + | 153 | Protein_2 | FlmC family protein | - |
| N0M81_RS24290 (N0M81_24290) | 3157..3276 | + | 120 | WP_229002406.1 | Hok/Gef family protein | - |
| N0M81_RS24295 (N0M81_24295) | 3426..4022 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| N0M81_RS24300 (N0M81_24300) | 4040..4324 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| N0M81_RS24305 (N0M81_24305) | 4398..5063 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| N0M81_RS24310 (N0M81_24310) | 5652..5981 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| N0M81_RS24315 (N0M81_24315) | 6382..6897 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| N0M81_RS24320 (N0M81_24320) | 7001..7543 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| N0M81_RS24325 (N0M81_24325) | 7540..7794 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| N0M81_RS24330 (N0M81_24330) | 7791..8033 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| N0M81_RS24335 (N0M81_24335) | 8604..8897 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| N0M81_RS24340 (N0M81_24340) | 9386..9634 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| N0M81_RS24345 (N0M81_24345) | 9631..9978 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| N0M81_RS24350 (N0M81_24350) | 10066..10509 | - | 444 | WP_023223351.1 | hypothetical protein | - |
| N0M81_RS24355 (N0M81_24355) | 10750..11049 | + | 300 | WP_034169410.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| N0M81_RS24360 (N0M81_24360) | 11309..11635 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| N0M81_RS24365 (N0M81_24365) | 11637..11960 | - | 324 | WP_223666488.1 | hypothetical protein | - |
| N0M81_RS24370 (N0M81_24370) | 11937..12077 | - | 141 | Protein_19 | hypothetical protein | - |
| N0M81_RS24375 (N0M81_24375) | 12097..12804 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| N0M81_RS24380 (N0M81_24380) | 12806..13558 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| N0M81_RS24385 (N0M81_24385) | 13576..13977 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| N0M81_RS24390 (N0M81_24390) | 14345..14686 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| N0M81_RS24395 (N0M81_24395) | 14683..18996 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| N0M81_RS24400 (N0M81_24400) | 19217..20842 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| N0M81_RS24405 (N0M81_24405) | 20914..21687 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| N0M81_RS24410 (N0M81_24410) | 21646..22086 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| N0M81_RS24415 (N0M81_24415) | 22432..22638 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| N0M81_RS24420 (N0M81_24420) | 22707..24872 | - | 2166 | WP_063078686.1 | type IA DNA topoisomerase | - |
| N0M81_RS24425 (N0M81_24425) | 24877..25452 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| N0M81_RS24430 (N0M81_24430) | 25622..27298 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| N0M81_RS24435 (N0M81_24435) | 27393..27925 | - | 533 | Protein_32 | thermonuclease family protein | - |
| N0M81_RS24440 (N0M81_24440) | 27955..28608 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| N0M81_RS24445 (N0M81_24445) | 28620..29744 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| N0M81_RS24450 (N0M81_24450) | 29882..30037 | + | 156 | WP_001358489.1 | hypothetical protein | - |
| N0M81_RS24455 (N0M81_24455) | 31456..32742 | - | 1287 | WP_104730792.1 | hypothetical protein | VF |
| N0M81_RS24460 (N0M81_24460) | 32755..33390 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| N0M81_RS24465 (N0M81_24465) | 33394..33876 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| N0M81_RS24470 (N0M81_24470) | 33942..34505 | - | 564 | WP_034169414.1 | type 4 pilus major pilin | - |
| N0M81_RS24475 (N0M81_24475) | 34555..35664 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| N0M81_RS24480 (N0M81_24480) | 35655..37193 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| N0M81_RS24485 (N0M81_24485) | 37218..37712 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| N0M81_RS24490 (N0M81_24490) | 37696..39006 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| N0M81_RS24495 (N0M81_24495) | 39057..40700 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| N0M81_RS24500 (N0M81_24500) | 40693..41229 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| N0M81_RS24505 (N0M81_24505) | 41276..43234 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| N0M81_RS24510 (N0M81_24510) | 43250..44305 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| N0M81_RS24515 (N0M81_24515) | 44324..45463 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| N0M81_RS24520 (N0M81_24520) | 45453..46223 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| N0M81_RS24525 (N0M81_24525) | 46220..46705 | - | 486 | WP_000370544.1 | Type IV secretion system protein virB8 | VF |
| N0M81_RS24530 (N0M81_24530) | 46834..46956 | - | 123 | WP_259904997.1 | hypothetical protein | - |
| N0M81_RS24535 (N0M81_24535) | 47087..49480 | - | 2394 | WP_259904999.1 | conjugal transfer protein | - |
| N0M81_RS24540 (N0M81_24540) | 49486..49806 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| N0M81_RS24545 (N0M81_24545) | 49877..50167 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| N0M81_RS24550 (N0M81_24550) | 50167..50751 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| N0M81_RS24555 (N0M81_24555) | 50772..51170 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| N0M81_RS24560 (N0M81_24560) | 51289..51726 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| N0M81_RS24565 (N0M81_24565) | 51732..52967 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| N0M81_RS24570 (N0M81_24570) | 52970..53269 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| N0M81_RS24575 (N0M81_24575) | 53317..54126 | + | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| N0M81_RS24580 (N0M81_24580) | 54349..54573 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| N0M81_RS24585 (N0M81_24585) | 54582..55226 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| N0M81_RS24590 (N0M81_24590) | 55232..56227 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| N0M81_RS24595 (N0M81_24595) | 56231..56488 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| N0M81_RS24600 (N0M81_24600) | 56767..57024 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| N0M81_RS24605 (N0M81_24605) | 57057..57503 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| N0M81_RS24610 (N0M81_24610) | 57514..57684 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| N0M81_RS24615 (N0M81_24615) | 57688..58131 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| N0M81_RS24620 (N0M81_24620) | 58505..59459 | - | 955 | Protein_69 | SPFH/Band 7/PHB domain protein | - |
| N0M81_RS24625 (N0M81_24625) | 59486..59662 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| N0M81_RS24630 (N0M81_24630) | 59655..59870 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| N0M81_RS24635 (N0M81_24635) | 59863..60315 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|