MGE detailed information
MGE type: Mobilizable plasmid MGE length: 61731 bp
Accession: NZ_CP104080 Location: 1..61731 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-3
Accession: NZ_CP104080 Location: 1..61731 Organism: Escherichia coli strain HB42 Replicon: plasmid pHB42-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N0M81_RS23920 (N0M81_23920) | 1..447 | - | 447 | WP_001074384.1 | hypothetical protein | - |
| N0M81_RS23925 (N0M81_23925) | 451..1293 | - | 843 | WP_000435064.1 | replication initiation protein | - |
| N0M81_RS23930 (N0M81_23930) | 1314..2153 | - | 840 | WP_024129959.1 | replication initiation protein | - |
| N0M81_RS23935 (N0M81_23935) | 3388..3639 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| N0M81_RS23940 (N0M81_23940) | 3629..3910 | + | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| N0M81_RS23945 (N0M81_23945) | 4149..4241 | - | 93 | Protein_5 | IS6 family transposase | - |
| N0M81_RS23950 (N0M81_23950) | 4407..5606 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| N0M81_RS23955 (N0M81_23955) | 5616..5804 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| N0M81_RS23960 (N0M81_23960) | 5924..7354 | + | 1431 | Protein_8 | IS4 family transposase IS50R | Transposase |
| N0M81_RS23965 (N0M81_23965) | 7383..8177 | + | 795 | WP_000572405.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N0M81_RS23970 (N0M81_23970) | 8198..8434 | + | 237 | Protein_10 | hypothetical protein | - |
| N0M81_RS23975 (N0M81_23975) | 8484..9188 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0M81_RS23980 (N0M81_23980) | 9134..9640 | - | 507 | WP_250697724.1 | replication initiation protein | - |
| N0M81_RS23985 (N0M81_23985) | 9646..10350 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| N0M81_RS23990 (N0M81_23990) | 10549..10872 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| N0M81_RS23995 (N0M81_23995) | 10977..12014 | + | 1038 | WP_044502555.1 | permease | - |
| N0M81_RS24000 (N0M81_24000) | 12307..12924 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| N0M81_RS24005 (N0M81_24005) | 13116..14672 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| N0M81_RS24010 (N0M81_24010) | 14934..15524 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| N0M81_RS24015 (N0M81_24015) | 15524..15781 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| N0M81_RS24020 (N0M81_24020) | 16135..18273 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| N0M81_RS24025 (N0M81_24025) | 18435..18851 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N0M81_RS24030 (N0M81_24030) | 18848..19078 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N0M81_RS24035 (N0M81_24035) | 19374..19664 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| N0M81_RS24040 (N0M81_24040) | 19654..20553 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| N0M81_RS24045 (N0M81_24045) | 20603..22594 | - | 1992 | WP_259904992.1 | KAP family NTPase | - |
| N0M81_RS24050 (N0M81_24050) | 22548..22829 | - | 282 | WP_259904994.1 | KAP family NTPase | - |
| N0M81_RS24055 (N0M81_24055) | 22831..23919 | - | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| N0M81_RS24060 (N0M81_24060) | 24462..24812 | + | 351 | WP_000493378.1 | hypothetical protein | - |
| N0M81_RS24065 (N0M81_24065) | 24863..25606 | + | 744 | WP_000129823.1 | hypothetical protein | - |
| N0M81_RS24070 (N0M81_24070) | 25603..26379 | + | 777 | WP_000015958.1 | site-specific integrase | - |
| N0M81_RS24075 (N0M81_24075) | 26437..26694 | - | 258 | WP_000764642.1 | hypothetical protein | - |
| N0M81_RS24080 (N0M81_24080) | 26823..26927 | - | 105 | WP_032409716.1 | hypothetical protein | - |
| N0M81_RS24085 (N0M81_24085) | 27457..28323 | + | 867 | WP_004118283.1 | replication initiation protein | - |
| N0M81_RS24090 (N0M81_24090) | 28500..28769 | - | 270 | WP_000339857.1 | hypothetical protein | - |
| N0M81_RS24095 (N0M81_24095) | 29184..30389 | + | 1206 | WP_000368714.1 | AAA family ATPase | - |
| N0M81_RS24100 (N0M81_24100) | 30389..31363 | + | 975 | WP_000064119.1 | ParB family protein | - |
| N0M81_RS24105 (N0M81_24105) | 31445..32716 | - | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| N0M81_RS24110 (N0M81_24110) | 32716..33147 | - | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N0M81_RS24115 (N0M81_24115) | 33553..35040 | + | 1488 | Protein_39 | group II intron reverse transcriptase/maturase | - |
| N0M81_RS24120 (N0M81_24120) | 35192..35890 | + | 699 | WP_259904990.1 | IS1 family transposase IS1X3 | Transposase |
| N0M81_RS24125 (N0M81_24125) | 35900..36037 | + | 138 | WP_259904996.1 | replication initiation protein | - |
| N0M81_RS24130 (N0M81_24130) | 35973..36209 | + | 237 | WP_259904991.1 | RepB family plasmid replication initiator protein | - |
| N0M81_RS24135 (N0M81_24135) | 37612..38580 | + | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| N0M81_RS24140 (N0M81_24140) | 38720..39106 | - | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| N0M81_RS24145 (N0M81_24145) | 39688..39921 | + | 234 | Protein_45 | transposase | - |
| N0M81_RS24150 (N0M81_24150) | 39954..41468 | - | 1515 | Protein_46 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N0M81_RS24155 (N0M81_24155) | 41534..42238 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0M81_RS24160 (N0M81_24160) | 42291..43046 | + | 756 | Protein_48 | IS110 family transposase IS5075 | Transposase |
| N0M81_RS24165 (N0M81_24165) | 43318..43404 | - | 87 | Protein_49 | Arm DNA-binding domain-containing protein | - |
| N0M81_RS24170 (N0M81_24170) | 43734..44549 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| N0M81_RS24175 (N0M81_24175) | 44610..45413 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N0M81_RS24180 (N0M81_24180) | 45413..46249 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| N0M81_RS24185 (N0M81_24185) | 46555..46797 | + | 243 | WP_000844627.1 | transposase | - |
| N0M81_RS24190 (N0M81_24190) | 46829..47479 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N0M81_RS24195 (N0M81_24195) | 47585..48784 | + | 1200 | WP_032153701.1 | Tetracycline resistance protein, class C | ARG |
| N0M81_RS24200 (N0M81_24200) | 48751..48939 | - | 189 | Protein_56 | IS91 family transposase | - |
| N0M81_RS24205 (N0M81_24205) | 49051..49356 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N0M81_RS24210 (N0M81_24210) | 49384..50598 | - | 1215 | WP_023300759.1 | Bicyclomycin resistance protein | ARG |
| N0M81_RS24215 (N0M81_24215) | 50815..51699 | - | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| N0M81_RS24220 (N0M81_24220) | 51730..53223 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| N0M81_RS24225 (N0M81_24225) | 53434..53658 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| N0M81_RS24230 (N0M81_24230) | 53655..54392 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N0M81_RS24235 (N0M81_24235) | 54804..55508 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N0M81_RS24240 (N0M81_24240) | 55573..55782 | + | 210 | Protein_64 | IS1 family transposase | - |
| N0M81_RS24245 (N0M81_24245) | 57080..57259 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| N0M81_RS24250 (N0M81_24250) | 57375..58019 | - | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N0M81_RS24255 (N0M81_24255) | 58314..58934 | + | 621 | WP_000864788.1 | ParA family protein | - |
| N0M81_RS24260 (N0M81_24260) | 58986..59216 | + | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| N0M81_RS24265 (N0M81_24265) | 59640..60704 | + | 1065 | WP_012291478.1 | ParA family protein | - |
| N0M81_RS24270 (N0M81_24270) | 61242..61595 | - | 354 | WP_024129958.1 | DNA distortion polypeptide 3 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|