MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 92705 bp
Accession: NZ_CP103865 Location: 1..92705 Organism: Escherichia coli O157:H7 strain RV06 Replicon: plasmid pRV06-1
Accession: NZ_CP103865 Location: 1..92705 Organism: Escherichia coli O157:H7 strain RV06 Replicon: plasmid pRV06-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUE47_RS27080 (7396) | 7396..7548 | - | 153 | Protein_1 | IS1 family transposase | - |
| NUE47_RS27085 (7545) | 7545..7665 | - | 121 | Protein_2 | IS21 family transposase ISEc62 | Transposase |
| NUE47_RS27090 (7705) | 7705..7968 | - | 264 | Protein_3 | IS21 family transposase ISEc62 | Transposase |
| NUE47_RS27095 (8062) | 8062..8411 | + | 350 | Protein_4 | IS3 family transposase IS3H | Transposase |
| NUE47_RS27100 (9083) | 9083..9514 | - | 432 | WP_001453090.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| NUE47_RS27105 (9582) | 9582..11603 | - | 2022 | Protein_6 | hypothetical protein | Relaxase |
| NUE47_RS27110 (11737) | 11737..11862 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| NUE47_RS27115 (11804) | 11804..11953 | - | 150 | Protein_8 | FlmC family protein | - |
| - (11960) | 11960..12158 | - | 199 | NuclAT_0 | - | - |
| - (11960) | 11960..12158 | - | 199 | NuclAT_0 | - | - |
| - (11960) | 11960..12158 | - | 199 | NuclAT_0 | - | - |
| - (11960) | 11960..12158 | - | 199 | NuclAT_0 | - | - |
| NUE47_RS27120 (12127) | 12127..12888 | - | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| NUE47_RS27125 (12885) | 12885..13319 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| NUE47_RS27130 (13374) | 13374..15332 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| NUE47_RS27135 (15398) | 15398..15631 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| NUE47_RS27140 (15688) | 15688..16140 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| NUE47_RS27145 (16166) | 16166..16372 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| NUE47_RS27150 (16442) | 16442..16885 | + | 444 | WP_001492078.1 | hypothetical protein | - |
| NUE47_RS27155 (16971) | 16971..17534 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| NUE47_RS27160 (17581) | 17581..18942 | - | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| NUE47_RS27165 (18994) | 18994..19224 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| NUE47_RS27170 (19741) | 19741..20250 | + | 510 | WP_032245379.1 | hypothetical protein | - |
| NUE47_RS27175 (20220) | 20220..20411 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| NUE47_RS27180 (20408) | 20408..20830 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| NUE47_RS27185 (20877) | 20877..21302 | - | 426 | WP_001198930.1 | antirestriction protein | - |
| NUE47_RS27190 (21720) | 21720..22496 | - | 777 | WP_001005037.1 | hypothetical protein | - |
| NUE47_RS27195 (22542) | 22542..23096 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| NUE47_RS27200 (22990) | 22990..23211 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| NUE47_RS27205 (23212) | 23212..23895 | - | 684 | WP_000085945.1 | DNA methylase | - |
| NUE47_RS27210 (23972) | 23972..24277 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| NUE47_RS27215 (24281) | 24281..25183 | - | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| NUE47_RS27220 (25260) | 25260..26984 | - | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| NUE47_RS27225 (28284) | 28284..29255 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| NUE47_RS27230 (29255) | 29255..30421 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| NUE47_RS27235 (31009) | 31009..31347 | - | 339 | WP_071525396.1 | RepB family plasmid replication initiator protein | - |
| NUE47_RS27240 (31309) | 31309..32522 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| NUE47_RS27245 (33245) | 33245..34051 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| NUE47_RS27250 (34052) | 34052..34357 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| NUE47_RS27255 (34359) | 34359..34577 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| NUE47_RS27260 (35036) | 35036..35719 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| NUE47_RS27265 (35716) | 35716..36336 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| NUE47_RS27270 (36333) | 36333..36533 | + | 201 | WP_000708307.1 | hypothetical protein | - |
| NUE47_RS27275 (36941) | 36941..37918 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| NUE47_RS27280 (38203) | 38203..38943 | - | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| NUE47_RS27285 (39064) | 39064..39294 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| NUE47_RS27290 (39463) | 39463..39747 | - | 285 | WP_001358890.1 | hypothetical protein | VF |
| NUE47_RS27295 (39777) | 39777..39971 | - | 195 | WP_001303402.1 | hypothetical protein | VF |
| NUE47_RS27300 (40038) | 40038..41477 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| NUE47_RS27305 (41481) | 41481..43601 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| NUE47_RS27310 (43651) | 43651..46647 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| NUE47_RS27315 (46649) | 46649..47164 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| NUE47_RS27325 (49055) | 49055..49456 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| NUE47_RS27330 (49548) | 49548..50264 | - | 717 | WP_001358889.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| NUE47_RS27335 (50439) | 50439..50951 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| NUE47_RS27340 (50938) | 50938..52215 | - | 1278 | WP_011321724.1 | Type II secretion system protein L | VF |
| NUE47_RS27345 (52149) | 52149..53126 | - | 978 | WP_000776550.1 | hypothetical protein | VF |
| NUE47_RS27350 (53123) | 53123..53722 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| NUE47_RS27355 (53719) | 53719..54066 | - | 348 | WP_000173396.1 | hypothetical protein | VF |
| NUE47_RS27360 (54081) | 54081..54635 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| NUE47_RS27365 (54632) | 54632..55066 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| NUE47_RS27370 (55097) | 55097..56320 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| NUE47_RS27375 (56322) | 56322..57827 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| NUE47_RS27380 (57827) | 57827..59794 | - | 1968 | WP_001302177.1 | Secretin PulD | VF |
| NUE47_RS27385 (59795) | 59795..60670 | - | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| NUE47_RS27390 (60757) | 60757..63453 | - | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| NUE47_RS27395 (63907) | 63907..63993 | + | 87 | Protein_64 | IS3 family transposase ISEhe3 | Transposase |
| NUE47_RS27400 (64097) | 64097..64285 | - | 189 | Protein_65 | hypothetical protein | - |
| NUE47_RS27405 (64338) | 64338..65336 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| NUE47_RS27410 (65410) | 65410..67131 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| NUE47_RS27415 (67221) | 67221..68327 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| NUE47_RS27420 (68327) | 68327..69148 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| NUE47_RS27425 (70590) | 70590..71071 | + | 482 | Protein_70 | IS1 family transposase IS1N | Transposase |
| NUE47_RS27430 (71327) | 71327..75229 | - | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| NUE47_RS27435 (75410) | 75410..76387 | - | 978 | Protein_72 | IS3 family transposase | - |
| NUE47_RS27440 (76444) | 76444..76833 | - | 390 | WP_001172748.1 | cytochrome b562 | - |
| NUE47_RS27445 (76877) | 76877..79087 | - | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| NUE47_RS27450 (79264) | 79264..79449 | + | 186 | WP_001302179.1 | hypothetical protein | - |
| NUE47_RS27455 (79449) | 79449..79865 | + | 417 | Protein_76 | IS91 family transposase | - |
| NUE47_RS27460 (79865) | 79865..80431 | + | 567 | Protein_77 | IS3 family transposase ISSd1 | Transposase |
| NUE47_RS27465 (80475) | 80475..80690 | + | 216 | Protein_78 | transposase | - |
| NUE47_RS27470 (80790) | 80790..80996 | - | 207 | WP_001105064.1 | hypothetical protein | - |
| NUE47_RS27475 (81091) | 81091..81366 | - | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NUE47_RS27480 (81366) | 81366..81650 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| NUE47_RS27485 (82562) | 82562..83419 | - | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| NUE47_RS27490 (83412) | 83412..83486 | - | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| NUE47_RS27495 (83722) | 83722..83976 | - | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| NUE47_RS27500 (84216) | 84216..84554 | - | 339 | WP_000766796.1 | hypothetical protein | - |
| NUE47_RS27505 (84592) | 84592..84801 | - | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| NUE47_RS27510 (84847) | 84847..85308 | - | 462 | WP_001233853.1 | thermonuclease family protein | - |
| NUE47_RS27515 (85553) | 85553..85765 | - | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| NUE47_RS27520 (85898) | 85898..86458 | - | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| NUE47_RS27525 (86561) | 86561..87421 | - | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| NUE47_RS27530 (87480) | 87480..88226 | - | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| NUE47_RS27535 (88246) | 88246..89634 | - | 1389 | Protein_92 | Multifunctional conjugation protein TraI | Relaxase |
| NUE47_RS27540 (89691) | 89691..89942 | + | 252 | Protein_93 | IS3 family transposase IS1203 | Transposase |
| NUE47_RS27545 (89949) | 89949..90194 | + | 246 | Protein_94 | IS3 family transposase IS1203 | Transposase |
| NUE47_RS27550 (90187) | 90187..90411 | - | 225 | Protein_95 | IS3 family transposase IS3H | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|