MGE detailed information
MGE type: Genomic_island MGE length: 10154 bp
Accession: NZ_CP103864 Location: 1319312..1329465 Organism: Escherichia coli O157:H7 strain RV06 Replicon: chromosome
Accession: NZ_CP103864 Location: 1319312..1329465 Organism: Escherichia coli O157:H7 strain RV06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NUE47_RS06485 (1314510) | 1314510..1315718 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| NUE47_RS06490 (1315744) | 1315744..1317075 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| NUE47_RS06495 (1317097) | 1317097..1318086 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| NUE47_RS06500 (1318185) | 1318185..1319123 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| NUE47_RS06505 (1319438) | 1319438..1319656 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| NUE47_RS06510 (1319912) | 1319912..1320451 | + | 540 | WP_000675739.1 | protein YhaB | - |
| NUE47_RS06515 (1320473) | 1320473..1321660 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| NUE47_RS06525 (1322289) | 1322289..1323434 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| NUE47_RS06530 (1323531) | 1323531..1324421 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| NUE47_RS06535 (1324451) | 1324451..1325221 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| NUE47_RS06540 (1325237) | 1325237..1326571 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| NUE47_RS06545 (1326946) | 1326946..1328517 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| NUE47_RS06550 (1328666) | 1328666..1329001 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| NUE47_RS06555 (1329001) | 1329001..1329465 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| NUE47_RS06560 (1329520) | 1329520..1330329 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| NUE47_RS06565 (1330578) | 1330578..1331858 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| NUE47_RS06570 (1331881) | 1331881..1332354 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| NUE47_RS06575 (1332365) | 1332365..1333144 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| NUE47_RS06580 (1333134) | 1333134..1334012 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| NUE47_RS06585 (1334030) | 1334030..1334464 | + | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |