MGE detailed information
MGE type: Genomic_island MGE length: 10391 bp
Accession: NZ_CP103791 Location: 1007472..1017862 Organism: Salmonella enterica subsp. enterica serovar Infantis strain MRS17_00712 Replicon: chromosome
Accession: NZ_CP103791 Location: 1007472..1017862 Organism: Salmonella enterica subsp. enterica serovar Infantis strain MRS17_00712 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYQ90_RS04790 (1002550) | 1002550..1002930 | + | 381 | WP_023993675.1 | DUF4440 domain-containing protein | - |
| NYQ90_RS04795 (1002986) | 1002986..1005553 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| NYQ90_RS04800 (1005712) | 1005712..1006233 | + | 522 | WP_023994250.1 | hypothetical protein | - |
| NYQ90_RS04805 (1006404) | 1006404..1007060 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| NYQ90_RS04810 (1007395) | 1007395..1007612 | + | 218 | Protein_941 | IS5 family transposase ISEcl3 | Transposase |
| NYQ90_RS04815 (1007685) | 1007685..1008212 | - | 528 | WP_023994249.1 | GNAT family N-acetyltransferase | Toxin Detail |
| NYQ90_RS04820 (1008209) | 1008209..1008499 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| NYQ90_RS04825 (1008769) | 1008769..1008947 | - | 179 | Protein_944 | IS3 family transposase | - |
| NYQ90_RS04830 (1009188) | 1009188..1009514 | + | 327 | WP_000393300.1 | hypothetical protein | - |
| NYQ90_RS04835 (1009787) | 1009787..1010134 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| NYQ90_RS04840 (1010119) | 1010119..1010568 | - | 450 | WP_000381612.1 | membrane protein | - |
| NYQ90_RS04845 (1011000) | 1011000..1011443 | - | 444 | WP_023993678.1 | Type 3 secretion system pilotin | VF |
| NYQ90_RS04850 (1011899) | 1011899..1012549 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| NYQ90_RS04855 (1012546) | 1012546..1014234 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| NYQ90_RS04860 (1014231) | 1014231..1015349 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| NYQ90_RS04865 (1015374) | 1015374..1017431 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| NYQ90_RS04870 (1017455) | 1017455..1017862 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| NYQ90_RS04875 (1017859) | 1017859..1019154 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| NYQ90_RS04880 (1019132) | 1019132..1019575 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| NYQ90_RS04885 (1019575) | 1019575..1020585 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| NYQ90_RS04890 (1020585) | 1020585..1021496 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| NYQ90_RS04895 (1021486) | 1021486..1022160 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| NYQ90_RS04900 (1022186) | 1022186..1022446 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |