MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP103694 Location: 4173774..4183125 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Accession: NZ_CP103694 Location: 4173774..4183125 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T31_RS20450 (4168935) | 4168935..4170236 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| M5T31_RS20455 (4170352) | 4170352..4170690 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| M5T31_RS20460 (4170666) | 4170666..4172363 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| M5T31_RS20465 (4172400) | 4172400..4172975 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| M5T31_RS20475 (4173774) | 4173774..4175312 | + | 1539 | WP_024218489.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| M5T31_RS20480 (4175678) | 4175678..4177012 | + | 1335 | WP_058905730.1 | cadaverine/lysine antiporter | - |
| M5T31_RS20485 (4177092) | 4177092..4179239 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| M5T31_RS20490 (4179298) | 4179298..4180755 | + | 1458 | WP_058905731.1 | dipeptide/tripeptide permease DtpC | - |
| M5T31_RS20495 (4180992) | 4180992..4182509 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| M5T31_RS20500 (4182628) | 4182628..4182801 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| M5T31_RS20505 (4182829) | 4182829..4183125 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| M5T31_RS20510 (4183352) | 4183352..4183624 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| M5T31_RS20515 (4183636) | 4183636..4183866 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| M5T31_RS20520 (4184047) | 4184047..4185678 | + | 1632 | WP_001565376.1 | sensor histidine kinase | - |
| M5T31_RS20525 (4185675) | 4185675..4186394 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |