MGE detailed information
MGE type: Genomic_island MGE length: 21118 bp
Accession: NZ_CP103694 Location: 3625928..3647045 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Accession: NZ_CP103694 Location: 3625928..3647045 Organism: Escherichia coli strain ST12468 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T31_RS17810 (3621431) | 3621431..3621832 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| - (3622550) | 3622550..3622630 | - | 81 | NuclAT_9 | - | - |
| - (3622550) | 3622550..3622630 | - | 81 | NuclAT_9 | - | - |
| - (3622550) | 3622550..3622630 | - | 81 | NuclAT_9 | - | - |
| - (3622550) | 3622550..3622630 | - | 81 | NuclAT_9 | - | - |
| M5T31_RS17815 (3621890) | 3621890..3623134 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| M5T31_RS17820 (3623226) | 3623226..3623684 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| M5T31_RS17825 (3623945) | 3623945..3625402 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| M5T31_RS17830 (3625459) | 3625459..3625980 | - | 522 | Protein_3492 | peptide chain release factor H | - |
| M5T31_RS17835 (3625979) | 3625979..3626182 | - | 204 | Protein_3493 | RtcB family protein | - |
| M5T31_RS17840 (3626428) | 3626428..3626880 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| M5T31_RS17845 (3626890) | 3626890..3627288 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| M5T31_RS17850 (3627291) | 3627291..3627584 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| M5T31_RS17855 (3627636) | 3627636..3628691 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| M5T31_RS17860 (3628762) | 3628762..3629547 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| M5T31_RS17865 (3629492) | 3629492..3631230 | + | 1739 | Protein_3499 | hypothetical protein | VF |
| M5T31_RS17870 (3631454) | 3631454..3631951 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| M5T31_RS17875 (3632127) | 3632127..3632900 | - | 774 | WP_015675129.1 | hypothetical protein | VF |
| M5T31_RS17880 (3633086) | 3633086..3633346 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| M5T31_RS17885 (3633349) | 3633349..3633627 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| M5T31_RS17890 (3633783) | 3633783..3634523 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| M5T31_RS17895 (3634494) | 3634494..3635261 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| M5T31_RS17900 (3635467) | 3635467..3636045 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| M5T31_RS17905 (3636285) | 3636285..3638729 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| M5T31_RS17910 (3638772) | 3638772..3639218 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| M5T31_RS17915 (3639399) | 3639399..3640169 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| M5T31_RS17920 (3640210) | 3640210..3641346 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| M5T31_RS17930 (3642336) | 3642336..3642815 | + | 480 | WP_001236645.1 | protein YkfM | - |
| M5T31_RS17935 (3642952) | 3642952..3643737 | - | 786 | WP_001053630.1 | hypothetical protein | - |
| M5T31_RS17945 (3644274) | 3644274..3645005 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| M5T31_RS17950 (3645070) | 3645070..3645537 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| M5T31_RS17955 (3645534) | 3645534..3646256 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| M5T31_RS17960 (3646290) | 3646290..3647045 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| M5T31_RS17965 (3647117) | 3647117..3648475 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| M5T31_RS17970 (3648523) | 3648523..3649119 | - | 597 | Protein_3519 | methyltransferase domain-containing protein | - |
| M5T31_RS17975 (3649150) | 3649150..3649950 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| M5T31_RS17980 (3650191) | 3650191..3651105 | + | 915 | WP_058905643.1 | DNA-binding transcriptional regulator YafC | - |
| M5T31_RS17985 (3651102) | 3651102..3651905 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|