MGE detailed information
MGE type: Conjugative plasmid MGE length: 90382 bp
Accession: NZ_CP103647 Location: 1..90382 Organism: Escherichia coli strain 961 Replicon: plasmid pMB5823_2
Accession: NZ_CP103647 Location: 1..90382 Organism: Escherichia coli strain 961 Replicon: plasmid pMB5823_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5R18_RS24970 (M5R18_24970) | 1..873 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| M5R18_RS24975 (M5R18_24975) | 1781..2050 | + | 270 | WP_032181987.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| M5R18_RS24980 (M5R18_24980) | 2050..2328 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| M5R18_RS24985 (M5R18_24985) | 2368..3216 | + | 849 | WP_032181988.1 | 3'-5' exonuclease | - |
| M5R18_RS24990 (M5R18_24990) | 3333..3806 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| M5R18_RS24995 (M5R18_24995) | 4283..4549 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| M5R18_RS25000 (M5R18_25000) | 4549..5025 | - | 477 | WP_032182001.1 | hypothetical protein | - |
| M5R18_RS25005 (M5R18_25005) | 5081..5683 | - | 603 | WP_259425782.1 | ProQ/FINO family protein | - |
| M5R18_RS25010 (M5R18_25010) | 6037..7383 | + | 1347 | WP_032181991.1 | protein YagA | - |
| M5R18_RS25015 (M5R18_25015) | 7380..7735 | - | 356 | Protein_9 | IS3 family transposase | - |
| M5R18_RS25020 (M5R18_25020) | 7793..8440 | - | 648 | WP_032181993.1 | hypothetical protein | - |
| M5R18_RS25025 (M5R18_25025) | 8630..9025 | - | 396 | WP_000445934.1 | plasmid partitioning/stability family protein | - |
| M5R18_RS25030 (M5R18_25030) | 9025..9984 | - | 960 | WP_000921960.1 | plasmid segregation protein ParM | - |
| M5R18_RS25035 (M5R18_25035) | 10423..11325 | + | 903 | WP_259425789.1 | DUF1281 domain-containing protein | - |
| M5R18_RS25040 (M5R18_25040) | 11322..11633 | + | 312 | WP_032158362.1 | hypothetical protein | - |
| M5R18_RS25045 (M5R18_25045) | 11709..12392 | + | 684 | WP_016238150.1 | DNA methylase | - |
| M5R18_RS25050 (M5R18_25050) | 12393..12614 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| M5R18_RS25055 (M5R18_25055) | 12544..13062 | + | 519 | WP_227532841.1 | DUF1380 family protein | - |
| M5R18_RS25060 (M5R18_25060) | 13107..13877 | + | 771 | WP_016238148.1 | hypothetical protein | - |
| M5R18_RS25065 (M5R18_25065) | 14293..14718 | + | 426 | WP_001546490.1 | antirestriction protein | - |
| M5R18_RS25070 (M5R18_25070) | 14765..15187 | + | 423 | WP_259425783.1 | DUF1380 domain-containing protein | - |
| M5R18_RS25075 (M5R18_25075) | 15184..15375 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| M5R18_RS25080 (M5R18_25080) | 15338..15859 | + | 522 | WP_259425784.1 | hypothetical protein | - |
| M5R18_RS25085 (M5R18_25085) | 16347..16577 | + | 231 | WP_001537563.1 | hypothetical protein | - |
| M5R18_RS25090 (M5R18_25090) | 16629..17990 | + | 1362 | WP_000170663.1 | DUF3560 domain-containing protein | - |
| M5R18_RS25095 (M5R18_25095) | 18037..18600 | + | 564 | WP_259425785.1 | class I SAM-dependent methyltransferase | - |
| M5R18_RS25100 (M5R18_25100) | 18686..19112 | - | 427 | Protein_26 | hypothetical protein | - |
| M5R18_RS25105 (M5R18_25105) | 19414..19941 | + | 528 | WP_049082421.1 | single-stranded DNA-binding protein | - |
| M5R18_RS25110 (M5R18_25110) | 19998..20231 | + | 234 | WP_016237213.1 | DUF905 domain-containing protein | - |
| M5R18_RS25115 (M5R18_25115) | 20293..22251 | + | 1959 | WP_016238141.1 | ParB/RepB/Spo0J family partition protein | - |
| M5R18_RS25120 (M5R18_25120) | 22306..22740 | + | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| M5R18_RS25125 (M5R18_25125) | 22737..23456 | + | 720 | WP_001681703.1 | plasmid SOS inhibition protein A | - |
| M5R18_RS25130 (M5R18_25130) | 23453..23869 | + | 417 | Protein_32 | hypothetical protein | - |
| M5R18_RS25135 (M5R18_25135) | 24601..25035 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| M5R18_RS25140 (M5R18_25140) | 25127..25393 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| M5R18_RS25145 (M5R18_25145) | 25458..26372 | + | 915 | WP_001681709.1 | Recombination-promoting nuclease RpnA | VF |
| M5R18_RS25150 (M5R18_25150) | 26433..26627 | + | 195 | WP_001681710.1 | hypothetical protein | - |
| M5R18_RS25155 (M5R18_25155) | 26658..26909 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| M5R18_RS25160 (M5R18_25160) | 27303..27974 | + | 672 | Protein_38 | DUF4942 domain-containing protein | - |
| M5R18_RS25165 (M5R18_25165) | 28061..28396 | - | 336 | WP_001579791.1 | hypothetical protein | - |
| M5R18_RS25170 (M5R18_25170) | 28629..28961 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| M5R18_RS25175 (M5R18_25175) | 28973..31684 | + | 2712 | WP_001681714.1 | Protein TraI | Relaxase |
| M5R18_RS25180 (M5R18_25180) | 31754..32185 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| M5R18_RS25185 (M5R18_25185) | 32283..32524 | - | 242 | Protein_43 | TonB-dependent receptor | - |
| M5R18_RS25190 (M5R18_25190) | 32980..35283 | - | 2304 | WP_259425786.1 | F-type conjugative transfer protein TrbC | - |
| M5R18_RS25195 (M5R18_25195) | 35264..36388 | - | 1125 | WP_012605160.1 | DsbC family protein | - |
| M5R18_RS25200 (M5R18_25200) | 36385..37701 | - | 1317 | WP_259425787.1 | conjugal transfer protein TrbA | - |
| M5R18_RS25205 (M5R18_25205) | 38777..39028 | + | 252 | WP_001081067.1 | DinQ-like type I toxin DqlB | - |
| M5R18_RS25210 (M5R18_25210) | 39091..39267 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| M5R18_RS25215 (M5R18_25215) | 39417..39884 | - | 468 | WP_001681654.1 | thermonuclease family protein | - |
| M5R18_RS25220 (M5R18_25220) | 40049..40672 | + | 624 | WP_032182101.1 | helix-turn-helix domain-containing protein | - |
| M5R18_RS25225 (M5R18_25225) | 40870..41085 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| M5R18_RS25230 (M5R18_25230) | 41089..41457 | - | 369 | WP_001390887.1 | hypothetical protein | - |
| M5R18_RS25235 (M5R18_25235) | 41469..41660 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| M5R18_RS25240 (M5R18_25240) | 41756..41998 | - | 243 | WP_001363144.1 | hypothetical protein | - |
| M5R18_RS25245 (M5R18_25245) | 42328..42480 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| M5R18_RS25250 (M5R18_25250) | 43107..43751 | - | 645 | WP_181042167.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| M5R18_RS25255 (M5R18_25255) | 43842..46007 | - | 2166 | WP_259425788.1 | DotA/TraY family protein | - |
| M5R18_RS25260 (M5R18_25260) | 46082..46651 | - | 570 | WP_021529219.1 | conjugal transfer protein TraX | - |
| M5R18_RS25265 (M5R18_25265) | 46648..47853 | - | 1206 | WP_025672386.1 | conjugal transfer protein TraW | - |
| M5R18_RS25270 (M5R18_25270) | 47811..48431 | - | 621 | WP_259425778.1 | conjugal transfer protein TraV | - |
| M5R18_RS25275 (M5R18_25275) | 48431..51475 | - | 3045 | WP_025672387.1 | conjugal transfer protein | - |
| M5R18_RS25280 (M5R18_25280) | 51651..52034 | - | 384 | WP_259425779.1 | hypothetical protein | - |
| M5R18_RS25285 (M5R18_25285) | 52031..52390 | - | 360 | WP_021529222.1 | hypothetical protein | - |
| M5R18_RS25290 (M5R18_25290) | 52445..53263 | - | 819 | WP_072153728.1 | conjugal transfer protein TraT | - |
| M5R18_RS25295 (M5R18_25295) | 53277..53429 | - | 153 | Protein_65 | TraS | - |
| M5R18_RS25300 (M5R18_25300) | 53486..53884 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| M5R18_RS25305 (M5R18_25305) | 53932..54462 | - | 531 | WP_000987021.1 | conjugal transfer protein TraQ | - |
| M5R18_RS25310 (M5R18_25310) | 54459..55172 | - | 714 | WP_012605176.1 | conjugal transfer protein TraP | - |
| M5R18_RS25315 (M5R18_25315) | 55169..56506 | - | 1338 | WP_021529225.1 | conjugal transfer protein TraO | - |
| M5R18_RS25320 (M5R18_25320) | 56510..57484 | - | 975 | WP_000547385.1 | hypothetical protein | VF |
| M5R18_RS25325 (M5R18_25325) | 57495..58190 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| M5R18_RS25330 (M5R18_25330) | 58202..58552 | - | 351 | WP_016238174.1 | hypothetical protein | - |
| M5R18_RS25335 (M5R18_25335) | 58569..62630 | - | 4062 | WP_032181796.1 | DUF5710 domain-containing protein | - |
| M5R18_RS25340 (M5R18_25340) | 62694..62984 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| M5R18_RS25345 (M5R18_25345) | 62981..64129 | - | 1149 | WP_016238172.1 | putative protein YggR | VF |
| M5R18_RS25350 (M5R18_25350) | 64113..64949 | - | 837 | WP_012605182.1 | hypothetical protein | VF |
| M5R18_RS25355 (M5R18_25355) | 64946..65404 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| M5R18_RS25360 (M5R18_25360) | 65508..66710 | - | 1203 | WP_021529228.1 | conjugal transfer protein TraF | - |
| M5R18_RS25365 (M5R18_25365) | 66812..67633 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| M5R18_RS25375 (M5R18_25375) | 69856..70980 | - | 1125 | WP_021561189.1 | site-specific integrase | - |
| M5R18_RS25380 (M5R18_25380) | 71307..72680 | - | 1374 | WP_096955011.1 | hypothetical protein | VF |
| M5R18_RS25385 (M5R18_25385) | 72677..73384 | - | 708 | WP_001114349.1 | A24 family peptidase | - |
| M5R18_RS25390 (M5R18_25390) | 73344..73826 | - | 483 | WP_001681690.1 | hypothetical protein | VF |
| M5R18_RS25395 (M5R18_25395) | 73874..74410 | - | 537 | WP_001011500.1 | type 4 pilus major pilin | - |
| M5R18_RS25400 (M5R18_25400) | 74460..75560 | - | 1101 | WP_001211427.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| M5R18_RS25405 (M5R18_25405) | 75562..77070 | - | 1509 | WP_012605185.1 | Type II secretion system protein E | VF |
| M5R18_RS25410 (M5R18_25410) | 77261..77512 | + | 252 | WP_001681796.1 | hypothetical protein | Antitoxin Detail |
| M5R18_RS25415 (M5R18_25415) | 77502..77783 | + | 282 | WP_001681795.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| M5R18_RS25420 (M5R18_25420) | 78093..78545 | - | 453 | WP_001681794.1 | hypothetical protein | VF |
| M5R18_RS25425 (M5R18_25425) | 78535..79830 | - | 1296 | WP_032325932.1 | type 4b pilus protein PilO2 | - |
| M5R18_RS25430 (M5R18_25430) | 79851..81470 | - | 1620 | WP_016238165.1 | Outer membrane lipoprotein BfpB | VF |
| M5R18_RS25435 (M5R18_25435) | 81501..81938 | - | 438 | WP_001681791.1 | type IV pilus biogenesis protein PilM | - |
| M5R18_RS25440 (M5R18_25440) | 81943..83010 | - | 1068 | WP_001681790.1 | hypothetical protein | VF |
| M5R18_RS25445 (M5R18_25445) | 83129..83557 | + | 429 | WP_016237239.1 | hypothetical protein | - |
| M5R18_RS25450 (M5R18_25450) | 83547..84170 | - | 624 | WP_250695658.1 | hypothetical protein | - |
| M5R18_RS25455 (M5R18_25455) | 84842..85189 | - | 348 | WP_001681787.1 | hypothetical protein | - |
| M5R18_RS25460 (M5R18_25460) | 85306..85548 | - | 243 | WP_001681786.1 | PilI type IV pilus biogenesis protein | - |
| M5R18_RS25465 (M5R18_25465) | 85629..87323 | - | 1695 | WP_001681785.1 | flotillin family protein | - |
| M5R18_RS25470 (M5R18_25470) | 87350..87970 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| M5R18_RS25475 (M5R18_25475) | 88237..89022 | - | 786 | WP_259425781.1 | traC | - |
| M5R18_RS25480 (M5R18_25480) | 89039..89545 | - | 507 | WP_001335626.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|