MGE detailed information
MGE type: Genomic_island MGE length: 67667 bp
Accession: NZ_CP103623 Location: 4282722..4350388 Organism: Escherichia coli strain 3985 Replicon: chromosome
Accession: NZ_CP103623 Location: 4282722..4350388 Organism: Escherichia coli strain 3985 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T36_RS20650 (4278116) | 4278116..4278454 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| M5T36_RS20655 (4278430) | 4278430..4280127 | + | 1698 | WP_000068978.1 | protein-disulfide reductase DsbD | - |
| M5T36_RS20660 (4280164) | 4280164..4280739 | + | 576 | WP_001611149.1 | transcriptional regulator | - |
| M5T36_RS20670 (4281098) | 4281098..4282288 | + | 1191 | WP_001218741.1 | tyrosine-type recombinase/integrase | - |
| M5T36_RS20675 (4282722) | 4282722..4283765 | + | 1044 | WP_000999870.1 | hypothetical protein | - |
| M5T36_RS20680 (4283909) | 4283909..4285582 | - | 1674 | WP_000281243.1 | sulfatase-like hydrolase/transferase | - |
| M5T36_RS20685 (4285648) | 4285648..4285845 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| M5T36_RS20690 (4285985) | 4285985..4286251 | - | 267 | WP_000766272.1 | YkgJ family cysteine cluster protein | - |
| M5T36_RS20695 (4286248) | 4286248..4287819 | - | 1572 | WP_001100181.1 | ATP--cob(I)alamin adenosyltransferase | - |
| M5T36_RS20700 (4287866) | 4287866..4288945 | - | 1080 | WP_021514490.1 | hypothetical protein | - |
| M5T36_RS20705 (4288994) | 4288994..4289890 | - | 897 | WP_000785678.1 | WYL domain-containing protein | - |
| M5T36_RS20710 (4290310) | 4290310..4291047 | - | 738 | WP_001389182.1 | OmpW family outer membrane protein | - |
| M5T36_RS20715 (4291366) | 4291366..4291839 | + | 474 | WP_000335225.1 | H-NS family nucleoid-associated regulatory protein | - |
| M5T36_RS20720 (4292391) | 4292391..4293398 | - | 1008 | WP_001232703.1 | LacI family DNA-binding transcriptional regulator | - |
| M5T36_RS20725 (4293424) | 4293424..4294833 | - | 1410 | WP_001324288.1 | sucrose-6-phosphate hydrolase | - |
| M5T36_RS20730 (4294833) | 4294833..4296203 | - | 1371 | WP_000344909.1 | sucrose-specific PTS transporter subunit IIBC | - |
| M5T36_RS20735 (4296264) | 4296264..4297781 | - | 1518 | WP_000277213.1 | carbohydrate porin | - |
| M5T36_RS20740 (4297949) | 4297949..4298869 | - | 921 | WP_000107666.1 | aminoimidazole riboside kinase | - |
| M5T36_RS20745 (4299094) | 4299094..4299225 | + | 132 | WP_000139282.1 | hypothetical protein | - |
| M5T36_RS20750 (4299589) | 4299589..4299690 | + | 102 | Protein_4058 | transposase domain-containing protein | - |
| M5T36_RS20755 (4299931) | 4299931..4300446 | - | 516 | WP_064754023.1 | restriction endonuclease subunit S | - |
| M5T36_RS20760 (4300495) | 4300495..4301613 | + | 1119 | Protein_4060 | IS91 family transposase ISVsa3 | Transposase |
| M5T36_RS20765 (4301876) | 4301876..4302115 | - | 240 | Protein_4061 | MerR family DNA-binding protein | - |
| M5T36_RS20770 (4302219) | 4302219..4303742 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| M5T36_RS20775 (4303732) | 4303732..4304514 | + | 783 | WP_001163403.1 | IS21 family transposase IS1326 | Transposase |
| M5T36_RS20780 (4304596) | 4304596..4306134 | + | 1539 | WP_000287612.1 | IS3 family transposase ISAtu3 | Transposase |
| M5T36_RS20785 (4306193) | 4306193..4306420 | - | 228 | Protein_4065 | hypothetical protein | - |
| M5T36_RS20790 (4306548) | 4306548..4307387 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| M5T36_RS20795 (4307381) | 4307381..4307728 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| M5T36_RS20800 (4307949) | 4307949..4308992 | + | 1044 | WP_032280803.1 | IS110 family transposase ISPa62 | Transposase |
| M5T36_RS20805 (4309234) | 4309234..4310063 | - | 830 | Protein_4069 | Streptomycin 3''-adenylyltransferase | ARG |
| M5T36_RS20810 (4310121) | 4310121..4310654 | - | 534 | WP_000381802.1 | 2''-aminoglycoside nucleotidyltransferase | ARG |
| M5T36_RS20815 (4310819) | 4310819..4311832 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| M5T36_RS20820 (4312035) | 4312035..4312385 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| M5T36_RS20825 (4312511) | 4312511..4313071 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| M5T36_RS20830 (4313074) | 4313074..4316040 | + | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| M5T36_RS20835 (4316129) | 4316129..4316764 | + | 636 | WP_001253263.1 | DUF3363 domain-containing protein | - |
| M5T36_RS20840 (4316981) | 4316981..4318195 | + | 1215 | WP_039023559.1 | Inner membrane transport protein YdhC | ARG |
| M5T36_RS20845 (4318223) | 4318223..4318528 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| M5T36_RS20850 (4318640) | 4318640..4320133 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| M5T36_RS20855 (4320570) | 4320570..4321016 | - | 447 | WP_000494235.1 | Rrf2 family transcriptional regulator | - |
| M5T36_RS20860 (4321408) | 4321408..4321920 | - | 513 | WP_024198497.1 | Dihydrofolate reductase | ARG |
| M5T36_RS20865 (4322004) | 4322004..4322285 | - | 282 | WP_001323507.1 | hypothetical protein | - |
| M5T36_RS20870 (4322372) | 4322372..4323187 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| M5T36_RS20875 (4323431) | 4323431..4323997 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| M5T36_RS20880 (4324833) | 4324833..4325008 | - | 176 | Protein_4084 | transposase | - |
| M5T36_RS20885 (4325197) | 4325197..4325373 | - | 177 | Protein_4085 | transketolase family protein | - |
| M5T36_RS20890 (4325433) | 4325433..4326124 | + | 692 | Protein_4086 | IS1 family transposase | - |
| M5T36_RS20895 (4326527) | 4326527..4326718 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| M5T36_RS20900 (4326787) | 4326787..4327035 | + | 249 | WP_001323514.1 | ProQ/FINO family protein | - |
| M5T36_RS20905 (4327053) | 4327053..4327601 | - | 549 | WP_001167455.1 | hypothetical protein | - |
| M5T36_RS20910 (4327802) | 4327802..4328038 | - | 237 | WP_000958153.1 | AlpA family transcriptional regulator | - |
| M5T36_RS20915 (4328107) | 4328107..4328679 | - | 573 | WP_000991602.1 | hypothetical protein | - |
| M5T36_RS20920 (4329036) | 4329036..4329767 | - | 732 | WP_023155732.1 | inovirus Gp2 family protein | - |
| M5T36_RS20925 (4331311) | 4331311..4332441 | - | 1131 | WP_000147745.1 | hypothetical protein | - |
| M5T36_RS20930 (4332626) | 4332626..4333510 | + | 885 | WP_000010403.1 | 50S ribosome-binding GTPase | - |
| M5T36_RS20935 (4333629) | 4333629..4334306 | + | 678 | WP_001562086.1 | hypothetical protein | - |
| M5T36_RS20940 (4334312) | 4334312..4334545 | + | 234 | WP_089540096.1 | DUF905 family protein | - |
| M5T36_RS20945 (4334635) | 4334635..4335453 | + | 819 | WP_001175165.1 | DUF932 domain-containing protein | - |
| M5T36_RS20950 (4335719) | 4335719..4336198 | + | 480 | WP_257244951.1 | antirestriction protein | - |
| M5T36_RS20955 (4336214) | 4336214..4336690 | + | 477 | WP_001366855.1 | RadC family protein | - |
| M5T36_RS20960 (4336753) | 4336753..4336974 | + | 222 | WP_000692309.1 | DUF987 domain-containing protein | - |
| M5T36_RS20965 (4337054) | 4337054..4337428 | + | 375 | WP_001285415.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5T36_RS20970 (4337475) | 4337475..4337852 | + | 378 | WP_000854735.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5T36_RS20975 (4337849) | 4337849..4338337 | + | 489 | WP_000761677.1 | DUF5983 family protein | - |
| M5T36_RS20980 (4338349) | 4338349..4338546 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| M5T36_RS20985 (4338631) | 4338631..4339497 | + | 867 | WP_001280433.1 | DUF4942 domain-containing protein | - |
| M5T36_RS20990 (4339569) | 4339569..4339832 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| M5T36_RS20995 (4339829) | 4339829..4340155 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| M5T36_RS21000 (4341038) | 4341038..4342576 | + | 1539 | WP_001187172.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| M5T36_RS21005 (4342941) | 4342941..4344275 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| M5T36_RS21010 (4344355) | 4344355..4346502 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| M5T36_RS21015 (4346561) | 4346561..4348018 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| M5T36_RS21020 (4348255) | 4348255..4349772 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| M5T36_RS21025 (4349891) | 4349891..4350064 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| M5T36_RS21030 (4350092) | 4350092..4350388 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| M5T36_RS21035 (4350615) | 4350615..4350887 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| M5T36_RS21040 (4350899) | 4350899..4351129 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| M5T36_RS21045 (4351310) | 4351310..4352941 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| M5T36_RS21050 (4352938) | 4352938..4353657 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|