MGE detailed information
MGE type: Genomic_island MGE length: 56298 bp
Accession: NZ_CP103589 Location: 4591243..4647540 Organism: Escherichia coli strain 4750 Replicon: chromosome
Accession: NZ_CP103589 Location: 4591243..4647540 Organism: Escherichia coli strain 4750 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5T00_RS22310 (4586682) | 4586682..4587375 | + | 694 | Protein_4369 | IS1 family transposase | - |
| M5T00_RS22315 (4587993) | 4587993..4588337 | + | 345 | Protein_4370 | alcohol dehydrogenase catalytic domain-containing protein | - |
| M5T00_RS22320 (4588410) | 4588410..4589566 | + | 1157 | WP_100183773.1 | IS3 family transposase | - |
| M5T00_RS22325 (4589587) | 4589587..4589772 | + | 186 | Protein_4372 | transposase domain-containing protein | - |
| M5T00_RS22330 (4589907) | 4589907..4591235 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| M5T00_RS22335 (4591243) | 4591243..4591818 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| M5T00_RS22340 (4592371) | 4592371..4593096 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| M5T00_RS22345 (4593093) | 4593093..4594397 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| M5T00_RS22350 (4594394) | 4594394..4595146 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| M5T00_RS22355 (4595146) | 4595146..4596930 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| M5T00_RS22360 (4597062) | 4597062..4598489 | - | 1428 | WP_259384571.1 | hypothetical protein | - |
| M5T00_RS22365 (4598728) | 4598728..4599204 | - | 477 | Protein_4380 | hypothetical protein | - |
| M5T00_RS22370 (4599204) | 4599204..4599548 | - | 345 | Protein_4381 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| M5T00_RS22375 (4600228) | 4600228..4600419 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| M5T00_RS22380 (4600472) | 4600472..4600705 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| M5T00_RS22385 (4600801) | 4600801..4601300 | - | 500 | Protein_4384 | DNA-binding protein | - |
| M5T00_RS22390 (4601651) | 4601651..4602769 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| M5T00_RS22395 (4602909) | 4602909..4603595 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| M5T00_RS22400 (4603650) | 4603650..4604408 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| M5T00_RS22405 (4604392) | 4604392..4605117 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| M5T00_RS22410 (4605129) | 4605129..4605398 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| M5T00_RS22415 (4605426) | 4605426..4605923 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| M5T00_RS22420 (4605952) | 4605952..4607148 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| M5T00_RS22425 (4607433) | 4607433..4607714 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| M5T00_RS22430 (4607736) | 4607736..4608521 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| M5T00_RS22435 (4608582) | 4608582..4610099 | + | 1518 | WP_001773853.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| M5T00_RS22440 (4610123) | 4610123..4610422 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| M5T00_RS22445 (4610433) | 4610433..4611008 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| M5T00_RS22450 (4611057) | 4611057..4613609 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| M5T00_RS22455 (4613718) | 4613718..4614635 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| M5T00_RS22460 (4614772) | 4614772..4615677 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| M5T00_RS22465 (4616163) | 4616163..4616702 | + | 540 | WP_001332064.1 | maturase | - |
| M5T00_RS22470 (4616769) | 4616769..4617251 | + | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| M5T00_RS22475 (4617801) | 4617801..4619063 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| M5T00_RS22480 (4619080) | 4619080..4620135 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| M5T00_RS22485 (4620264) | 4620264..4621415 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| M5T00_RS22490 (4621460) | 4621460..4622005 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| M5T00_RS22495 (4622362) | 4622362..4622706 | - | 345 | WP_001773854.1 | hypothetical protein | VF |
| M5T00_RS22500 (4622957) | 4622957..4623343 | - | 387 | WP_153782320.1 | TetR family transcriptional regulator | - |
| M5T00_RS22505 (4623449) | 4623449..4624597 | - | 1149 | Protein_4408 | Multidrug resistance protein MexB | VF |
| M5T00_RS22510 (4624697) | 4624697..4624957 | + | 261 | Protein_4409 | IS3 family transposase IS2 | Transposase |
| M5T00_RS22515 (4624949) | 4624949..4625011 | - | 63 | Protein_4410 | IS3 family transposase IS2 | Transposase |
| M5T00_RS22520 (4625140) | 4625140..4625265 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| M5T00_RS22525 (4625262) | 4625262..4625495 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| M5T00_RS22530 (4625564) | 4625564..4626139 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| M5T00_RS22535 (4626486) | 4626486..4627217 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| M5T00_RS22540 (4628670) | 4628670..4629893 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| M5T00_RS22545 (4629994) | 4629994..4630878 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| M5T00_RS22550 (4631081) | 4631081..4631761 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| M5T00_RS22555 (4631909) | 4631909..4632586 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| M5T00_RS22560 (4632592) | 4632592..4632825 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| M5T00_RS22565 (4632915) | 4632915..4633733 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| M5T00_RS22570 (4633824) | 4633824..4634309 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| M5T00_RS22575 (4634325) | 4634325..4634801 | + | 477 | WP_001186786.1 | RadC family protein | - |
| M5T00_RS22580 (4634864) | 4634864..4635085 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| M5T00_RS22585 (4635248) | 4635248..4635616 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| M5T00_RS22590 (4635706) | 4635706..4636080 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| M5T00_RS22595 (4636077) | 4636077..4636565 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| M5T00_RS22600 (4636577) | 4636577..4636774 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| M5T00_RS22605 (4636871) | 4636871..4637440 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| M5T00_RS22610 (4638189) | 4638189..4639727 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| M5T00_RS22615 (4640093) | 4640093..4641427 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| M5T00_RS22620 (4641507) | 4641507..4643654 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| M5T00_RS22625 (4643713) | 4643713..4645170 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| M5T00_RS22630 (4645407) | 4645407..4646924 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| M5T00_RS22635 (4647043) | 4647043..4647216 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| M5T00_RS22640 (4647244) | 4647244..4647540 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| M5T00_RS22645 (4647769) | 4647769..4648041 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| M5T00_RS22650 (4648053) | 4648053..4648283 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| M5T00_RS22655 (4648464) | 4648464..4650095 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| M5T00_RS22660 (4650092) | 4650092..4650811 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|